RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 RICTORQ6R327 1708 aa14.97□□□□□ -0.01
DDX41-209ENST00000508279 CDC42BPBQ9Y5S2 1711 aa14.96□□□□□ -0.01
DDX41-209ENST00000508279 SCAPERQ9BY12 1400 aa14.94□□□□□ -0.02
DDX41-209ENST00000508279 MTUS2Q5JR59 1369 aa14.94□□□□□ -0.02
DDX41-209ENST00000508279 CDC42BPAQ5VT25 1732 aa14.93□□□□□ -0.02
DDX41-209ENST00000508279 PREX2Q70Z35 1606 aa14.92□□□□□ -0.02
DDX41-209ENST00000508279 MYT1LQ9UL68 1186 aa14.92□□□□□ -0.02
DDX41-209ENST00000508279 ARID4BQ4LE39 1312 aaPredicted RBP14.92□□□□□ -0.02
DDX41-209ENST00000508279 ZNF777Q9ULD5 760 aaPredicted RBP14.91□□□□□ -0.02
DDX41-209ENST00000508279 POGZQ7Z3K3 1410 aa14.89□□□□□ -0.03
DDX41-209ENST00000508279 ARHGEF40Q8TER5 1519 aa14.88□□□□□ -0.03
DDX41-209ENST00000508279 VPS8Q8N3P4 1428 aa14.88□□□□□ -0.03
DDX41-209ENST00000508279 ZFYVE16Q7Z3T8 1539 aa14.87□□□□□ -0.03
DDX41-209ENST00000508279 ZMYM4Q5VZL5 1548 aa14.87□□□□□ -0.03
DDX41-209ENST00000508279 EHBP1L1Q8N3D4 1523 aa14.87□□□□□ -0.03
DDX41-209ENST00000508279 CCNB3Q8WWL7 1395 aa14.86□□□□□ -0.03
DDX41-209ENST00000508279 YEATS2Q9ULM3 1422 aa14.86□□□□□ -0.03
DDX41-209ENST00000508279 AFAP1Q8N556 730 aa14.86□□□□□ -0.03
DDX41-209ENST00000508279 ITSN2Q9NZM3 1697 aa14.85□□□□□ -0.03
DDX41-209ENST00000508279 ABCC1P33527 1531 aa14.84□□□□□ -0.03
DDX41-209ENST00000508279 GPATCH8Q9UKJ3 1502 aaKnown RBP14.84□□□□□ -0.03
DDX41-209ENST00000508279 CFDP1Q9UEE9 299 aaPredicted RBP14.84□□□□□ -0.03
DDX41-209ENST00000508279 TIAM1Q13009 1591 aa14.84□□□□□ -0.03
DDX41-209ENST00000508279 ZNF518AQ6AHZ1 1483 aa14.83□□□□□ -0.03
DDX41-209ENST00000508279 BCORL1Q5H9F3 1711 aa14.83□□□□□ -0.04
DDX41-209ENST00000508279 SUPT6HQ7KZ85 1726 aaKnown RBP14.83□□□□□ -0.04
DDX41-209ENST00000508279 SAMD9LQ8IVG5 1584 aa14.82□□□□□ -0.04
DDX41-209ENST00000508279 MLECQ14165 292 aa14.82□□□□□ -0.04
DDX41-209ENST00000508279 MAGI2Q86UL8 1455 aa14.82□□□□□ -0.04
DDX41-209ENST00000508279 ARHGEF12Q9NZN5 1544 aa14.82□□□□□ -0.04
DDX41-209ENST00000508279 HNRNPMP52272 730 aaKnown RBP eCLIP14.81□□□□□ -0.04
DDX41-209ENST00000508279 TRAPPC8Q9Y2L5 1435 aa14.81□□□□□ -0.04
DDX41-209ENST00000508279 SYCP2Q9BX26 1530 aa14.81□□□□□ -0.04
DDX41-209ENST00000508279 HECW2Q9P2P5 1572 aa14.81□□□□□ -0.04
DDX41-209ENST00000508279 SIGLEC1Q9BZZ2 1709 aa14.8□□□□□ -0.04
DDX41-209ENST00000508279 PLPPR3Q6T4P5 718 aa14.8□□□□□ -0.04
DDX41-209ENST00000508279 KDM5CP41229 1560 aa14.79□□□□□ -0.04
DDX41-209ENST00000508279 ADAMTSL3P82987 1691 aa14.79□□□□□ -0.04
DDX41-209ENST00000508279 APLP2Q06481 763 aa14.79□□□□□ -0.04
DDX41-209ENST00000508279 MADDQ8WXG6 1647 aa14.78□□□□□ -0.04
DDX41-209ENST00000508279 ATP10AO60312 1499 aa14.78□□□□□ -0.04
DDX41-209ENST00000508279 NCOA2Q15596 1464 aa14.78□□□□□ -0.04
DDX41-209ENST00000508279 RIMS1Q86UR5 1692 aaKnown RBP14.77□□□□□ -0.04
DDX41-209ENST00000508279 C9orf84Q5VXU9 1444 aa14.77□□□□□ -0.04
DDX41-209ENST00000508279 ZNF644Q9H582 1327 aaPredicted RBP14.77□□□□□ -0.04
DDX41-209ENST00000508279 LRRC9Q6ZRR7 1453 aa14.76□□□□□ -0.05
DDX41-209ENST00000508279 KANK4Q5T7N3 995 aaPredicted RBP14.76□□□□□ -0.05
DDX41-209ENST00000508279 ABCA6Q8N139 1617 aa14.76□□□□□ -0.05
DDX41-209ENST00000508279 DIP2CQ9Y2E4 1556 aa14.75□□□□□ -0.05
DDX41-209ENST00000508279 KIDINS220Q9ULH0 1771 aa14.75□□□□□ -0.05
DDX41-209ENST00000508279 PLEKHH2Q8IVE3 1493 aa14.75□□□□□ -0.05
DDX41-209ENST00000508279 SPAG9O60271 1321 aaKnown RBP14.74□□□□□ -0.05
DDX41-209ENST00000508279 FER1L4A9Z1Z3 1794 aa14.74□□□□□ -0.05
DDX41-209ENST00000508279 PTPRMP28827 1452 aa14.73□□□□□ -0.05
DDX41-209ENST00000508279 MLH3Q9UHC1 1453 aa14.73□□□□□ -0.05
DDX41-209ENST00000508279 KIAA1107Q9UPP5 1409 aa14.72□□□□□ -0.05
DDX41-209ENST00000508279 MAP3K1Q13233 1512 aa14.71□□□□□ -0.05
DDX41-209ENST00000508279 CAMSAP2Q08AD1 1489 aa14.69□□□□□ -0.06
DDX41-209ENST00000508279 ATP7AQ04656 1500 aa14.69□□□□□ -0.06
DDX41-209ENST00000508279 INO80Q9ULG1 1556 aaPredicted RBP14.67□□□□□ -0.06
DDX41-209ENST00000508279 REREQ9P2R6 1566 aa14.66□□□□□ -0.06
DDX41-209ENST00000508279 MBD5Q9P267 1494 aa14.66□□□□□ -0.06
DDX41-209ENST00000508279 ESF1Q9H501 851 aaKnown RBP14.66□□□□□ -0.06
DDX41-209ENST00000508279 CCDC141Q6ZP82 1450 aa14.64□□□□□ -0.07
DDX41-209ENST00000508279 MYOM3Q5VTT5 1437 aa14.64□□□□□ -0.07
DDX41-209ENST00000508279 ADGBQ8N7X0 1667 aa14.63□□□□□ -0.07
DDX41-209ENST00000508279 A2MP01023 1474 aa14.63□□□□□ -0.07
DDX41-209ENST00000508279 AGLP35573 1532 aa14.62□□□□□ -0.07
DDX41-209ENST00000508279 CEBPAP49715 358 aaPredicted RBP14.62□□□□□ -0.07
DDX41-209ENST00000508279 TSPY4P0CV99 314 aa14.61□□□□□ -0.07
DDX41-209ENST00000508279 TSPY10P0CW01 314 aa14.61□□□□□ -0.07
DDX41-209ENST00000508279 RSPH4AQ5TD94 716 aa14.6□□□□□ -0.07
DDX41-209ENST00000508279 GGT6Q6P531 493 aa14.6□□□□□ -0.07
DDX41-209ENST00000508279 ARHGEF5Q12774 1597 aa14.6□□□□□ -0.07
DDX41-209ENST00000508279 PTPN23Q9H3S7 1636 aa14.59□□□□□ -0.07
DDX41-209ENST00000508279 MIA2Q96PC5 1412 aa14.59□□□□□ -0.07
DDX41-209ENST00000508279 RTEL1-TNFRSF6BF6WH68 1400 aa14.58□□□□□ -0.07
DDX41-209ENST00000508279 PPARGC1BQ86YN6 1023 aaKnown RBP14.58□□□□□ -0.08
DDX41-209ENST00000508279 PLXNC1O60486 1568 aa14.58□□□□□ -0.08
DDX41-209ENST00000508279 C3P01024 1663 aa14.58□□□□□ -0.08
DDX41-209ENST00000508279 CLTCQ00610 1675 aaKnown RBP14.56□□□□□ -0.08
DDX41-209ENST00000508279 KIF3BO15066 747 aa14.55□□□□□ -0.08
DDX41-209ENST00000508279 HSPA2P54652 639 aa14.54□□□□□ -0.08
DDX41-209ENST00000508279 DHX29Q7Z478 1369 aaKnown RBP14.54□□□□□ -0.08
DDX41-209ENST00000508279 FGD6Q6ZV73 1430 aa14.54□□□□□ -0.08
DDX41-209ENST00000508279 LMTK3Q96Q04 1460 aa14.54□□□□□ -0.08
DDX41-209ENST00000508279 FAM50AQ14320 339 aaKnown RBP14.53□□□□□ -0.08
DDX41-209ENST00000508279 SETD1BQ9UPS6 1966 aaKnown RBP14.53□□□□□ -0.08
DDX41-209ENST00000508279 CROCC2H7BZ55 1655 aa14.52□□□□□ -0.08
DDX41-209ENST00000508279 PREX1Q8TCU6 1659 aa14.52□□□□□ -0.08
DDX41-209ENST00000508279 CNTLNQ9NXG0 1405 aa14.52□□□□□ -0.08
DDX41-209ENST00000508279 MAST1Q9Y2H9 1570 aa14.51□□□□□ -0.09
DDX41-209ENST00000508279 MROH2AA6NES4 1674 aa14.51□□□□□ -0.09
DDX41-209ENST00000508279 CHIC2Q9UKJ5 165 aa14.5□□□□□ -0.09
DDX41-209ENST00000508279 ABCC5O15440 1437 aa14.49□□□□□ -0.09
DDX41-209ENST00000508279 ZMYM3Q14202 1370 aa14.49□□□□□ -0.09
DDX41-209ENST00000508279 DNMT1P26358 1616 aaKnown RBP14.49□□□□□ -0.09
DDX41-209ENST00000508279 DAPK1P53355 1430 aa14.49□□□□□ -0.09
DDX41-209ENST00000508279 UHRF1BP1Q6BDS2 1440 aa14.49□□□□□ -0.09
DDX41-209ENST00000508279 RRP7BPQ9NSQ0 103 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms