RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 FGD6Q6ZV73 1430 aa16.42■□□□□ 0.22
PROM1-207ENST00000508167 ABCC10Q5T3U5 1492 aa16.41■□□□□ 0.22
PROM1-207ENST00000508167 GPATCH8Q9UKJ3 1502 aaKnown RBP16.41■□□□□ 0.22
PROM1-207ENST00000508167 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.4■□□□□ 0.22
PROM1-207ENST00000508167 PLCH2O75038 1416 aa16.39■□□□□ 0.21
PROM1-207ENST00000508167 FANCAO15360 1455 aa16.37■□□□□ 0.21
PROM1-207ENST00000508167 MIA2Q96PC5 1412 aa16.36■□□□□ 0.21
PROM1-207ENST00000508167 TTC37Q6PGP7 1564 aa16.36■□□□□ 0.21
PROM1-207ENST00000508167 AFAP1Q8N556 730 aa16.35■□□□□ 0.21
PROM1-207ENST00000508167 RRP7BPQ9NSQ0 103 aa16.35■□□□□ 0.21
PROM1-207ENST00000508167 DHX57Q6P158 1386 aaKnown RBP16.35■□□□□ 0.21
PROM1-207ENST00000508167 RAPGEF3O95398 923 aa16.34■□□□□ 0.21
PROM1-207ENST00000508167 SCAPERQ9BY12 1400 aa16.34■□□□□ 0.21
PROM1-207ENST00000508167 RSPH4AQ5TD94 716 aa16.33■□□□□ 0.2
PROM1-207ENST00000508167 CCER1Q8TC90 406 aaPredicted RBP16.33■□□□□ 0.2
PROM1-207ENST00000508167 TSPOAP1O95153 1857 aa16.33■□□□□ 0.2
PROM1-207ENST00000508167 SPAG9O60271 1321 aaKnown RBP16.32■□□□□ 0.2
PROM1-207ENST00000508167 AKNAQ7Z591 1439 aa16.32■□□□□ 0.2
PROM1-207ENST00000508167 ADGRL1O94910 1474 aa16.31■□□□□ 0.2
PROM1-207ENST00000508167 TEX14Q8IWB6 1497 aa16.31■□□□□ 0.2
PROM1-207ENST00000508167 CAMSAP2Q08AD1 1489 aa16.3■□□□□ 0.2
PROM1-207ENST00000508167 ITSN2Q9NZM3 1697 aa16.3■□□□□ 0.2
PROM1-207ENST00000508167 DIP2BQ9P265 1576 aa16.3■□□□□ 0.2
PROM1-207ENST00000508167 MYO5CQ9NQX4 1742 aa16.29■□□□□ 0.2
PROM1-207ENST00000508167 PLEKHH2Q8IVE3 1493 aa16.29■□□□□ 0.2
PROM1-207ENST00000508167 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.29■□□□□ 0.2
PROM1-207ENST00000508167 ABCA9Q8IUA7 1624 aa16.28■□□□□ 0.2
PROM1-207ENST00000508167 PTPN23Q9H3S7 1636 aa16.28■□□□□ 0.2
PROM1-207ENST00000508167 TRIM52Q96A61 297 aa16.26■□□□□ 0.19
PROM1-207ENST00000508167 CDC42BPAQ5VT25 1732 aa16.25■□□□□ 0.19
PROM1-207ENST00000508167 DENND4BO75064 1496 aaPredicted RBP16.24■□□□□ 0.19
PROM1-207ENST00000508167 GLI2P10070 1586 aa16.24■□□□□ 0.19
PROM1-207ENST00000508167 SYCP2Q9BX26 1530 aa16.24■□□□□ 0.19
PROM1-207ENST00000508167 PREX2Q70Z35 1606 aa16.24■□□□□ 0.19
PROM1-207ENST00000508167 PTPRKQ15262 1439 aa16.23■□□□□ 0.19
PROM1-207ENST00000508167 ARID4BQ4LE39 1312 aaPredicted RBP16.23■□□□□ 0.19
PROM1-207ENST00000508167 ANKRD30AQ9BXX3 1397 aa16.23■□□□□ 0.19
PROM1-207ENST00000508167 NEO1Q92859 1461 aa16.22■□□□□ 0.19
PROM1-207ENST00000508167 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.22■□□□□ 0.19
PROM1-207ENST00000508167 TRAPPC8Q9Y2L5 1435 aa16.22■□□□□ 0.19
PROM1-207ENST00000508167 DAPK1P53355 1430 aa16.21■□□□□ 0.19
PROM1-207ENST00000508167 TCOF1Q13428 1488 aaKnown RBP16.21■□□□□ 0.19
PROM1-207ENST00000508167 CCDC141Q6ZP82 1450 aa16.21■□□□□ 0.19
PROM1-207ENST00000508167 KIAA1107Q9UPP5 1409 aa16.21■□□□□ 0.19
PROM1-207ENST00000508167 CDC42BPBQ9Y5S2 1711 aa16.2■□□□□ 0.18
PROM1-207ENST00000508167 ABCC5O15440 1437 aa16.2■□□□□ 0.18
PROM1-207ENST00000508167 C9orf84Q5VXU9 1444 aa16.2■□□□□ 0.18
PROM1-207ENST00000508167 SAMD9LQ8IVG5 1584 aa16.19■□□□□ 0.18
PROM1-207ENST00000508167 GCC2Q8IWJ2 1684 aa16.18■□□□□ 0.18
PROM1-207ENST00000508167 ARAP3Q8WWN8 1544 aa16.18■□□□□ 0.18
PROM1-207ENST00000508167 MLECQ14165 292 aa16.17■□□□□ 0.18
PROM1-207ENST00000508167 RAB3GAP2Q9H2M9 1393 aa16.17■□□□□ 0.18
PROM1-207ENST00000508167 MAP3K4Q9Y6R4 1608 aa16.17■□□□□ 0.18
PROM1-207ENST00000508167 CFAP74Q9C0B2 1584 aa16.17■□□□□ 0.18
PROM1-207ENST00000508167 ZNF518AQ6AHZ1 1483 aa16.16■□□□□ 0.18
PROM1-207ENST00000508167 CLSPNQ9HAW4 1339 aa16.16■□□□□ 0.18
PROM1-207ENST00000508167 KIF15Q9NS87 1388 aa16.16■□□□□ 0.18
PROM1-207ENST00000508167 KIF13AQ9H1H9 1805 aa16.15■□□□□ 0.18
PROM1-207ENST00000508167 KIF3BO15066 747 aa16.15■□□□□ 0.18
PROM1-207ENST00000508167 ESF1Q9H501 851 aaKnown RBP16.15■□□□□ 0.18
PROM1-207ENST00000508167 ARHGEF12Q9NZN5 1544 aa16.15■□□□□ 0.18
PROM1-207ENST00000508167 GGT6Q6P531 493 aa16.15■□□□□ 0.18
PROM1-207ENST00000508167 ABCC1P33527 1531 aa16.14■□□□□ 0.17
PROM1-207ENST00000508167 MBD5Q9P267 1494 aa16.14■□□□□ 0.17
PROM1-207ENST00000508167 KDM6BO15054 1643 aa16.14■□□□□ 0.17
PROM1-207ENST00000508167 POGZQ7Z3K3 1410 aa16.13■□□□□ 0.17
PROM1-207ENST00000508167 SETD5Q9C0A6 1442 aa16.11■□□□□ 0.17
PROM1-207ENST00000508167 PLPPR3Q6T4P5 718 aa16.11■□□□□ 0.17
PROM1-207ENST00000508167 DNMT1P26358 1616 aaKnown RBP16.09■□□□□ 0.17
PROM1-207ENST00000508167 NCOA1Q15788 1441 aa16.08■□□□□ 0.17
PROM1-207ENST00000508167 HFM1A2PYH4 1435 aa16.08■□□□□ 0.16
PROM1-207ENST00000508167 ANKRD50Q9ULJ7 1429 aa16.08■□□□□ 0.16
PROM1-207ENST00000508167 CROCC2H7BZ55 1655 aa16.07■□□□□ 0.16
PROM1-207ENST00000508167 ARHGEF5Q12774 1597 aa16.07■□□□□ 0.16
PROM1-207ENST00000508167 COL17A1Q9UMD9 1497 aaPredicted RBP16.06■□□□□ 0.16
PROM1-207ENST00000508167 ROCK1Q13464 1354 aa16.06■□□□□ 0.16
PROM1-207ENST00000508167 SLC4A1APQ9BWU0 796 aaKnown RBP16.06■□□□□ 0.16
PROM1-207ENST00000508167 NAIPQ13075 1403 aa16.05■□□□□ 0.16
PROM1-207ENST00000508167 YEATS2Q9ULM3 1422 aa16.04■□□□□ 0.16
PROM1-207ENST00000508167 ATP7AQ04656 1500 aa16.04■□□□□ 0.16
PROM1-207ENST00000508167 RTEL1-TNFRSF6BF6WH68 1400 aa16.04■□□□□ 0.16
PROM1-207ENST00000508167 SHANK2Q9UPX8 1470 aa16.04■□□□□ 0.16
PROM1-207ENST00000508167 NUP155O75694 1391 aa16.03■□□□□ 0.16
PROM1-207ENST00000508167 KANK1Q14678 1352 aa16.02■□□□□ 0.16
PROM1-207ENST00000508167 PPRC1Q5VV67 1664 aaKnown RBP16.01■□□□□ 0.15
PROM1-207ENST00000508167 WASHC2CQ9Y4E1 1318 aa16.01■□□□□ 0.15
PROM1-207ENST00000508167 DHX29Q7Z478 1369 aaKnown RBP16.01■□□□□ 0.15
PROM1-207ENST00000508167 MLH3Q9UHC1 1453 aa16.01■□□□□ 0.15
PROM1-207ENST00000508167 A2MP01023 1474 aa16■□□□□ 0.15
PROM1-207ENST00000508167 ZFYVE16Q7Z3T8 1539 aa16■□□□□ 0.15
PROM1-207ENST00000508167 HECW2Q9P2P5 1572 aa15.99■□□□□ 0.15
PROM1-207ENST00000508167 ACIN1Q9UKV3 1341 aaKnown RBP15.98■□□□□ 0.15
PROM1-207ENST00000508167 ATP10AO60312 1499 aa15.98■□□□□ 0.15
PROM1-207ENST00000508167 MAGI2Q86UL8 1455 aa15.97■□□□□ 0.15
PROM1-207ENST00000508167 ADGRL2O95490 1459 aa15.97■□□□□ 0.15
PROM1-207ENST00000508167 DUOX2Q9NRD8 1548 aa15.96■□□□□ 0.15
PROM1-207ENST00000508167 ADGBQ8N7X0 1667 aa15.96■□□□□ 0.15
PROM1-207ENST00000508167 ZNF316A6NFI3 1004 aaPredicted RBP15.96■□□□□ 0.15
PROM1-207ENST00000508167 MPHOSPH9Q99550 1183 aa15.96■□□□□ 0.14
PROM1-207ENST00000508167 FOXD1Q16676 465 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms