RNA–Protein interactions for RNA: ENST00000508075.1

NEDD4-207, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 965 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-207ENST00000508075 CDK11AQ9UQ88 783 aaPredicted RBP23.46■■□□□ 1.35
NEDD4-207ENST00000508075 CASKIN1Q8WXD9 1431 aa23.45■■□□□ 1.34
NEDD4-207ENST00000508075 PLPPR3Q6T4P5 718 aa23.45■■□□□ 1.34
NEDD4-207ENST00000508075 CDC42BPBQ9Y5S2 1711 aa23.44■■□□□ 1.34
NEDD4-207ENST00000508075 ARHGAP5Q13017 1502 aa23.43■■□□□ 1.34
NEDD4-207ENST00000508075 ZFYVE16Q7Z3T8 1539 aa23.43■■□□□ 1.34
NEDD4-207ENST00000508075 RIMS1Q86UR5 1692 aaKnown RBP23.42■■□□□ 1.34
NEDD4-207ENST00000508075 ZMYM4Q5VZL5 1548 aa23.42■■□□□ 1.34
NEDD4-207ENST00000508075 MLECQ14165 292 aa23.41■■□□□ 1.34
NEDD4-207ENST00000508075 EFCAB2Q5VUJ9 269 aa23.41■■□□□ 1.34
NEDD4-207ENST00000508075 PTPRMP28827 1452 aa23.41■■□□□ 1.34
NEDD4-207ENST00000508075 POGZQ7Z3K3 1410 aa23.41■■□□□ 1.34
NEDD4-207ENST00000508075 CCDC18Q5T9S5 1454 aa23.37■■□□□ 1.33
NEDD4-207ENST00000508075 FYCO1Q9BQS8 1478 aa23.36■■□□□ 1.33
NEDD4-207ENST00000508075 PREX2Q70Z35 1606 aa23.35■■□□□ 1.33
NEDD4-207ENST00000508075 AFAP1Q8N556 730 aa23.35■■□□□ 1.33
NEDD4-207ENST00000508075 CDC42BPAQ5VT25 1732 aa23.35■■□□□ 1.33
NEDD4-207ENST00000508075 MYT1LQ9UL68 1186 aa23.33■■□□□ 1.33
NEDD4-207ENST00000508075 ARHGEF12Q9NZN5 1544 aa23.3■■□□□ 1.32
NEDD4-207ENST00000508075 LOC105371045A0A1W2PR82 267 aa23.29■■□□□ 1.32
NEDD4-207ENST00000508075 ZNF777Q9ULD5 760 aaPredicted RBP23.29■■□□□ 1.32
NEDD4-207ENST00000508075 TRAPPC8Q9Y2L5 1435 aa23.28■■□□□ 1.32
NEDD4-207ENST00000508075 MAGI2Q86UL8 1455 aa23.28■■□□□ 1.32
NEDD4-207ENST00000508075 ITSN2Q9NZM3 1697 aa23.28■■□□□ 1.32
NEDD4-207ENST00000508075 FER1L4A9Z1Z3 1794 aa23.27■■□□□ 1.32
NEDD4-207ENST00000508075 CEP162Q5TB80 1403 aa23.26■■□□□ 1.31
NEDD4-207ENST00000508075 ATP10AO60312 1499 aa23.26■■□□□ 1.31
NEDD4-207ENST00000508075 ABCC1P33527 1531 aa23.26■■□□□ 1.31
NEDD4-207ENST00000508075 ZNF518AQ6AHZ1 1483 aa23.25■■□□□ 1.31
NEDD4-207ENST00000508075 KDM5CP41229 1560 aa23.25■■□□□ 1.31
NEDD4-207ENST00000508075 ABCA6Q8N139 1617 aa23.24■■□□□ 1.31
NEDD4-207ENST00000508075 DIP2CQ9Y2E4 1556 aa23.23■■□□□ 1.31
NEDD4-207ENST00000508075 C9orf84Q5VXU9 1444 aa23.23■■□□□ 1.31
NEDD4-207ENST00000508075 SAMD9LQ8IVG5 1584 aa23.23■■□□□ 1.31
NEDD4-207ENST00000508075 GPATCH8Q9UKJ3 1502 aaKnown RBP23.2■■□□□ 1.3
NEDD4-207ENST00000508075 SYCP2Q9BX26 1530 aa23.18■■□□□ 1.3
NEDD4-207ENST00000508075 MTUS2Q5JR59 1369 aa23.18■■□□□ 1.3
NEDD4-207ENST00000508075 CEBPAP49715 358 aaPredicted RBP23.18■■□□□ 1.3
NEDD4-207ENST00000508075 HSPA2P54652 639 aa23.18■■□□□ 1.3
NEDD4-207ENST00000508075 KIDINS220Q9ULH0 1771 aa23.17■■□□□ 1.3
NEDD4-207ENST00000508075 HNRNPMP52272 730 aaKnown RBP eCLIP23.17■■□□□ 1.3
NEDD4-207ENST00000508075 LMTK3Q96Q04 1460 aa23.17■■□□□ 1.3
NEDD4-207ENST00000508075 ILDR1Q86SU0 546 aaPredicted RBP23.16■■□□□ 1.3
NEDD4-207ENST00000508075 CCNB3Q8WWL7 1395 aa23.14■■□□□ 1.29
NEDD4-207ENST00000508075 MLH3Q9UHC1 1453 aa23.12■■□□□ 1.29
NEDD4-207ENST00000508075 ZNF644Q9H582 1327 aaPredicted RBP23.11■■□□□ 1.29
NEDD4-207ENST00000508075 TIAM1Q13009 1591 aa23.11■■□□□ 1.29
NEDD4-207ENST00000508075 CFDP1Q9UEE9 299 aaPredicted RBP23.11■■□□□ 1.29
NEDD4-207ENST00000508075 EHBP1L1Q8N3D4 1523 aa23.08■■□□□ 1.29
NEDD4-207ENST00000508075 SUPT6HQ7KZ85 1726 aaKnown RBP23.08■■□□□ 1.28
NEDD4-207ENST00000508075 SENP3Q9H4L4 574 aaPredicted RBP23.05■■□□□ 1.28
NEDD4-207ENST00000508075 REREQ9P2R6 1566 aa23.05■■□□□ 1.28
NEDD4-207ENST00000508075 SPAG9O60271 1321 aaKnown RBP23.05■■□□□ 1.28
NEDD4-207ENST00000508075 C3P01024 1663 aa23.02■■□□□ 1.28
NEDD4-207ENST00000508075 ATP7AQ04656 1500 aa23.02■■□□□ 1.28
NEDD4-207ENST00000508075 INO80Q9ULG1 1556 aaPredicted RBP23■■□□□ 1.27
NEDD4-207ENST00000508075 AGLP35573 1532 aa22.99■■□□□ 1.27
NEDD4-207ENST00000508075 PREX1Q8TCU6 1659 aa22.99■■□□□ 1.27
NEDD4-207ENST00000508075 NCOA2Q15596 1464 aa22.98■■□□□ 1.27
NEDD4-207ENST00000508075 VPS8Q8N3P4 1428 aa22.97■■□□□ 1.27
NEDD4-207ENST00000508075 KIAA1107Q9UPP5 1409 aa22.96■■□□□ 1.27
NEDD4-207ENST00000508075 PLEKHH2Q8IVE3 1493 aa22.96■■□□□ 1.27
NEDD4-207ENST00000508075 ESF1Q9H501 851 aaKnown RBP22.94■■□□□ 1.26
NEDD4-207ENST00000508075 MBD5Q9P267 1494 aa22.93■■□□□ 1.26
NEDD4-207ENST00000508075 KANK4Q5T7N3 995 aaPredicted RBP22.93■■□□□ 1.26
NEDD4-207ENST00000508075 CLTCQ00610 1675 aaKnown RBP22.92■■□□□ 1.26
NEDD4-207ENST00000508075 A2MP01023 1474 aa22.92■■□□□ 1.26
NEDD4-207ENST00000508075 CAMSAP2Q08AD1 1489 aa22.92■■□□□ 1.26
NEDD4-207ENST00000508075 GGT6Q6P531 493 aa22.9■■□□□ 1.26
NEDD4-207ENST00000508075 PLXNC1O60486 1568 aa22.89■■□□□ 1.26
NEDD4-207ENST00000508075 LRRC9Q6ZRR7 1453 aa22.89■■□□□ 1.25
NEDD4-207ENST00000508075 ADGBQ8N7X0 1667 aa22.89■■□□□ 1.25
NEDD4-207ENST00000508075 SETD1BQ9UPS6 1966 aaKnown RBP22.87■■□□□ 1.25
NEDD4-207ENST00000508075 STRCQ7RTU9 1775 aa22.87■■□□□ 1.25
NEDD4-207ENST00000508075 UHRF1BP1Q6BDS2 1440 aa22.87■■□□□ 1.25
NEDD4-207ENST00000508075 MROH2AA6NES4 1674 aa22.82■■□□□ 1.24
NEDD4-207ENST00000508075 CCDC141Q6ZP82 1450 aa22.82■■□□□ 1.24
NEDD4-207ENST00000508075 ZMYM3Q14202 1370 aa22.82■■□□□ 1.24
NEDD4-207ENST00000508075 PHF23Q9BUL5 403 aaPredicted RBP22.82■■□□□ 1.24
NEDD4-207ENST00000508075 CNTLNQ9NXG0 1405 aa22.8■■□□□ 1.24
NEDD4-207ENST00000508075 RTEL1-TNFRSF6BF6WH68 1400 aa22.76■■□□□ 1.23
NEDD4-207ENST00000508075 KIF3BO15066 747 aa22.76■■□□□ 1.23
NEDD4-207ENST00000508075 FBXO41Q8TF61 875 aa22.76■■□□□ 1.23
NEDD4-207ENST00000508075 DHX29Q7Z478 1369 aaKnown RBP22.75■■□□□ 1.23
NEDD4-207ENST00000508075 ARHGEF5Q12774 1597 aa22.74■■□□□ 1.23
NEDD4-207ENST00000508075 MYO3AQ8NEV4 1616 aa22.72■■□□□ 1.23
NEDD4-207ENST00000508075 PTPRKQ15262 1439 aa22.72■■□□□ 1.23
NEDD4-207ENST00000508075 MAP3K1Q13233 1512 aa22.72■■□□□ 1.23
NEDD4-207ENST00000508075 MYOM3Q5VTT5 1437 aa22.71■■□□□ 1.23
NEDD4-207ENST00000508075 CAMSAP1Q5T5Y3 1602 aa22.7■■□□□ 1.22
NEDD4-207ENST00000508075 FBXO31Q5XUX0 539 aaPredicted RBP22.69■■□□□ 1.22
NEDD4-207ENST00000508075 CERKQ8TCT0 537 aa22.69■■□□□ 1.22
NEDD4-207ENST00000508075 NPATQ14207 1427 aa22.68■■□□□ 1.22
NEDD4-207ENST00000508075 NCKAP5LQ9HCH0 1330 aa22.68■■□□□ 1.22
NEDD4-207ENST00000508075 TSPY4P0CV99 314 aa22.68■■□□□ 1.22
NEDD4-207ENST00000508075 TSPY10P0CW01 314 aa22.68■■□□□ 1.22
NEDD4-207ENST00000508075 APLP2Q06481 763 aa22.67■■□□□ 1.22
NEDD4-207ENST00000508075 NCOA1Q15788 1441 aa22.65■■□□□ 1.22
NEDD4-207ENST00000508075 RSPH4AQ5TD94 716 aa22.65■■□□□ 1.22
NEDD4-207ENST00000508075 CEP170BQ9Y4F5 1589 aaPredicted RBP22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms