RNA–Protein interactions for RNA: ENST00000507901.5

DDR1-261, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-261ENST00000507901 LRRC9Q6ZRR7 1453 aa25.97■■□□□ 1.75
DDR1-261ENST00000507901 GPATCH8Q9UKJ3 1502 aaKnown RBP25.95■■□□□ 1.74
DDR1-261ENST00000507901 RICTORQ6R327 1708 aa25.94■■□□□ 1.74
DDR1-261ENST00000507901 SUPT6HQ7KZ85 1726 aaKnown RBP25.92■■□□□ 1.74
DDR1-261ENST00000507901 ARHGAP5Q13017 1502 aa25.92■■□□□ 1.74
DDR1-261ENST00000507901 ADGRL1O94910 1474 aa25.89■■□□□ 1.73
DDR1-261ENST00000507901 NCOA2Q15596 1464 aa25.89■■□□□ 1.73
DDR1-261ENST00000507901 KANK4Q5T7N3 995 aaPredicted RBP25.88■■□□□ 1.73
DDR1-261ENST00000507901 EFCAB2Q5VUJ9 269 aa25.88■■□□□ 1.73
DDR1-261ENST00000507901 DENND4BO75064 1496 aaPredicted RBP25.87■■□□□ 1.73
DDR1-261ENST00000507901 ABCC1P33527 1531 aa25.86■■□□□ 1.73
DDR1-261ENST00000507901 ZMYM4Q5VZL5 1548 aa25.85■■□□□ 1.73
DDR1-261ENST00000507901 ITSN2Q9NZM3 1697 aa25.85■■□□□ 1.73
DDR1-261ENST00000507901 SAMD9LQ8IVG5 1584 aa25.85■■□□□ 1.73
DDR1-261ENST00000507901 KDM4FA0A1W2PPD8 638 aa25.84■■□□□ 1.73
DDR1-261ENST00000507901 RAPGEF3O95398 923 aa25.84■■□□□ 1.73
DDR1-261ENST00000507901 POGZQ7Z3K3 1410 aa25.84■■□□□ 1.73
DDR1-261ENST00000507901 CCNB3Q8WWL7 1395 aa25.83■■□□□ 1.73
DDR1-261ENST00000507901 SCAPERQ9BY12 1400 aa25.83■■□□□ 1.73
DDR1-261ENST00000507901 ARHGEF12Q9NZN5 1544 aa25.83■■□□□ 1.72
DDR1-261ENST00000507901 KDM5CP41229 1560 aa25.79■■□□□ 1.72
DDR1-261ENST00000507901 ARHGEF40Q8TER5 1519 aa25.75■■□□□ 1.71
DDR1-261ENST00000507901 ZNF518AQ6AHZ1 1483 aa25.75■■□□□ 1.71
DDR1-261ENST00000507901 KIAA1107Q9UPP5 1409 aa25.74■■□□□ 1.71
DDR1-261ENST00000507901 MAGI2Q86UL8 1455 aa25.73■■□□□ 1.71
DDR1-261ENST00000507901 CFDP1Q9UEE9 299 aaPredicted RBP25.73■■□□□ 1.71
DDR1-261ENST00000507901 SYCP2Q9BX26 1530 aa25.73■■□□□ 1.71
DDR1-261ENST00000507901 TRAPPC8Q9Y2L5 1435 aa25.72■■□□□ 1.71
DDR1-261ENST00000507901 PLEKHH2Q8IVE3 1493 aa25.72■■□□□ 1.71
DDR1-261ENST00000507901 APLP2Q06481 763 aa25.71■■□□□ 1.71
DDR1-261ENST00000507901 MBD5Q9P267 1494 aa25.69■■□□□ 1.7
DDR1-261ENST00000507901 MYOM3Q5VTT5 1437 aa25.68■■□□□ 1.7
DDR1-261ENST00000507901 ZFYVE16Q7Z3T8 1539 aa25.68■■□□□ 1.7
DDR1-261ENST00000507901 YEATS2Q9ULM3 1422 aa25.67■■□□□ 1.7
DDR1-261ENST00000507901 MLH3Q9UHC1 1453 aa25.66■■□□□ 1.7
DDR1-261ENST00000507901 HECW2Q9P2P5 1572 aa25.66■■□□□ 1.7
DDR1-261ENST00000507901 AFAP1Q8N556 730 aa25.66■■□□□ 1.7
DDR1-261ENST00000507901 CAMSAP2Q08AD1 1489 aa25.66■■□□□ 1.7
DDR1-261ENST00000507901 ZNF644Q9H582 1327 aaPredicted RBP25.65■■□□□ 1.7
DDR1-261ENST00000507901 MIA2Q96PC5 1412 aa25.65■■□□□ 1.7
DDR1-261ENST00000507901 ZNF777Q9ULD5 760 aaPredicted RBP25.64■■□□□ 1.7
DDR1-261ENST00000507901 KIDINS220Q9ULH0 1771 aa25.64■■□□□ 1.69
DDR1-261ENST00000507901 SIGLEC1Q9BZZ2 1709 aa25.63■■□□□ 1.69
DDR1-261ENST00000507901 INO80Q9ULG1 1556 aaPredicted RBP25.61■■□□□ 1.69
DDR1-261ENST00000507901 DIP2CQ9Y2E4 1556 aa25.61■■□□□ 1.69
DDR1-261ENST00000507901 ABCA6Q8N139 1617 aa25.6■■□□□ 1.69
DDR1-261ENST00000507901 HNRNPMP52272 730 aaKnown RBP eCLIP25.6■■□□□ 1.69
DDR1-261ENST00000507901 ARHGEF5Q12774 1597 aa25.59■■□□□ 1.69
DDR1-261ENST00000507901 REREQ9P2R6 1566 aa25.57■■□□□ 1.68
DDR1-261ENST00000507901 ATP10AO60312 1499 aa25.56■■□□□ 1.68
DDR1-261ENST00000507901 FGD6Q6ZV73 1430 aa25.55■■□□□ 1.68
DDR1-261ENST00000507901 TCOF1Q13428 1488 aaKnown RBP25.55■■□□□ 1.68
DDR1-261ENST00000507901 PTPN23Q9H3S7 1636 aa25.55■■□□□ 1.68
DDR1-261ENST00000507901 CCDC141Q6ZP82 1450 aa25.54■■□□□ 1.68
DDR1-261ENST00000507901 ATP7AQ04656 1500 aa25.53■■□□□ 1.68
DDR1-261ENST00000507901 C9orf84Q5VXU9 1444 aa25.53■■□□□ 1.68
DDR1-261ENST00000507901 BCORL1Q5H9F3 1711 aa25.51■■□□□ 1.67
DDR1-261ENST00000507901 ADAMTSL3P82987 1691 aa25.5■■□□□ 1.67
DDR1-261ENST00000507901 RTEL1-TNFRSF6BF6WH68 1400 aa25.49■■□□□ 1.67
DDR1-261ENST00000507901 SPAG9O60271 1321 aaKnown RBP25.48■■□□□ 1.67
DDR1-261ENST00000507901 RSPH4AQ5TD94 716 aa25.48■■□□□ 1.67
DDR1-261ENST00000507901 MAST1Q9Y2H9 1570 aa25.48■■□□□ 1.67
DDR1-261ENST00000507901 PLXNC1O60486 1568 aa25.46■■□□□ 1.67
DDR1-261ENST00000507901 AGLP35573 1532 aa25.46■■□□□ 1.67
DDR1-261ENST00000507901 CROCC2H7BZ55 1655 aa25.45■■□□□ 1.66
DDR1-261ENST00000507901 ADGBQ8N7X0 1667 aa25.43■■□□□ 1.66
DDR1-261ENST00000507901 DNMT1P26358 1616 aaKnown RBP25.43■■□□□ 1.66
DDR1-261ENST00000507901 ARID4BQ4LE39 1312 aaPredicted RBP25.42■■□□□ 1.66
DDR1-261ENST00000507901 ABCC5O15440 1437 aa25.4■■□□□ 1.66
DDR1-261ENST00000507901 SHANK2Q9UPX8 1470 aa25.4■■□□□ 1.66
DDR1-261ENST00000507901 A2MP01023 1474 aa25.37■■□□□ 1.65
DDR1-261ENST00000507901 MADDQ8WXG6 1647 aa25.37■■□□□ 1.65
DDR1-261ENST00000507901 DAPK1P53355 1430 aa25.37■■□□□ 1.65
DDR1-261ENST00000507901 PPARGC1BQ86YN6 1023 aaKnown RBP25.36■■□□□ 1.65
DDR1-261ENST00000507901 MYT1LQ9UL68 1186 aa25.34■■□□□ 1.65
DDR1-261ENST00000507901 TSPY4P0CV99 314 aa25.31■■□□□ 1.64
DDR1-261ENST00000507901 TSPY10P0CW01 314 aa25.31■■□□□ 1.64
DDR1-261ENST00000507901 DHX29Q7Z478 1369 aaKnown RBP25.31■■□□□ 1.64
DDR1-261ENST00000507901 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.31■■□□□ 1.64
DDR1-261ENST00000507901 FER1L4A9Z1Z3 1794 aa25.3■■□□□ 1.64
DDR1-261ENST00000507901 RRBP1Q9P2E9 1410 aaKnown RBP25.29■■□□□ 1.64
DDR1-261ENST00000507901 RIMS1Q86UR5 1692 aaKnown RBP25.27■■□□□ 1.64
DDR1-261ENST00000507901 ADGRL2O95490 1459 aa25.27■■□□□ 1.64
DDR1-261ENST00000507901 PTPRMP28827 1452 aa25.27■■□□□ 1.64
DDR1-261ENST00000507901 PTPRKQ15262 1439 aa25.24■■□□□ 1.63
DDR1-261ENST00000507901 EIF2AK4Q9P2K8 1649 aaKnown RBP25.23■■□□□ 1.63
DDR1-261ENST00000507901 DUOX2Q9NRD8 1548 aa25.22■■□□□ 1.63
DDR1-261ENST00000507901 FAM50AQ14320 339 aaKnown RBP25.21■■□□□ 1.63
DDR1-261ENST00000507901 NCOA1Q15788 1441 aa25.2■■□□□ 1.63
DDR1-261ENST00000507901 MLECQ14165 292 aa25.2■■□□□ 1.62
DDR1-261ENST00000507901 RNF17Q9BXT8 1623 aaKnown RBP25.19■■□□□ 1.62
DDR1-261ENST00000507901 KIF15Q9NS87 1388 aa25.18■■□□□ 1.62
DDR1-261ENST00000507901 MROH2AA6NES4 1674 aa25.16■■□□□ 1.62
DDR1-261ENST00000507901 MROH1Q8NDA8 1641 aa25.15■■□□□ 1.62
DDR1-261ENST00000507901 ERBINQ96RT1 1412 aa25.15■■□□□ 1.62
DDR1-261ENST00000507901 ANKRD30AQ9BXX3 1397 aa25.15■■□□□ 1.62
DDR1-261ENST00000507901 FAM135AQ9P2D6 1515 aa25.14■■□□□ 1.62
DDR1-261ENST00000507901 CNTLNQ9NXG0 1405 aa25.12■■□□□ 1.61
DDR1-261ENST00000507901 ROCK1Q13464 1354 aa25.12■■□□□ 1.61
DDR1-261ENST00000507901 C3P01024 1663 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms