RNA–Protein interactions for RNA: ENST00000507771.5

ITGA3-210, Transcript of integrin subunit alpha 3, humanhuman

TSL 3

Gene ITGA3, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-210ENST00000507771 ITSN2Q9NZM3 1697 aa17.17■□□□□ 0.34
ITGA3-210ENST00000507771 PREX2Q70Z35 1606 aa17.17■□□□□ 0.34
ITGA3-210ENST00000507771 NEO1Q92859 1461 aa17.17■□□□□ 0.34
ITGA3-210ENST00000507771 PPARGC1BQ86YN6 1023 aaKnown RBP17.15■□□□□ 0.34
ITGA3-210ENST00000507771 PPRC1Q5VV67 1664 aaKnown RBP17.15■□□□□ 0.34
ITGA3-210ENST00000507771 CDC42BPAQ5VT25 1732 aa17.15■□□□□ 0.34
ITGA3-210ENST00000507771 ZNF777Q9ULD5 760 aaPredicted RBP17.14■□□□□ 0.33
ITGA3-210ENST00000507771 MYOM3Q5VTT5 1437 aa17.13■□□□□ 0.33
ITGA3-210ENST00000507771 AKNAQ7Z591 1439 aa17.13■□□□□ 0.33
ITGA3-210ENST00000507771 CDC42BPBQ9Y5S2 1711 aa17.12■□□□□ 0.33
ITGA3-210ENST00000507771 MIA2Q96PC5 1412 aa17.11■□□□□ 0.33
ITGA3-210ENST00000507771 PLEKHH2Q8IVE3 1493 aa17.1■□□□□ 0.33
ITGA3-210ENST00000507771 ADGRL1O94910 1474 aa17.09■□□□□ 0.33
ITGA3-210ENST00000507771 KDM6BO15054 1643 aa17.07■□□□□ 0.32
ITGA3-210ENST00000507771 SCAPERQ9BY12 1400 aa17.06■□□□□ 0.32
ITGA3-210ENST00000507771 DENND4BO75064 1496 aaPredicted RBP17.05■□□□□ 0.32
ITGA3-210ENST00000507771 FGD6Q6ZV73 1430 aa17.05■□□□□ 0.32
ITGA3-210ENST00000507771 SAMD9LQ8IVG5 1584 aa17.04■□□□□ 0.32
ITGA3-210ENST00000507771 CAMSAP2Q08AD1 1489 aa17.04■□□□□ 0.32
ITGA3-210ENST00000507771 KIAA1107Q9UPP5 1409 aa17.04■□□□□ 0.32
ITGA3-210ENST00000507771 ABCC1P33527 1531 aa17.03■□□□□ 0.32
ITGA3-210ENST00000507771 RSPH4AQ5TD94 716 aa17.02■□□□□ 0.32
ITGA3-210ENST00000507771 ZNF644Q9H582 1327 aaPredicted RBP17.01■□□□□ 0.31
ITGA3-210ENST00000507771 ZNF518AQ6AHZ1 1483 aa17.01■□□□□ 0.31
ITGA3-210ENST00000507771 PTPN23Q9H3S7 1636 aa17.01■□□□□ 0.31
ITGA3-210ENST00000507771 FAM50AQ14320 339 aaKnown RBP17.01■□□□□ 0.31
ITGA3-210ENST00000507771 SYCP2Q9BX26 1530 aa17.01■□□□□ 0.31
ITGA3-210ENST00000507771 RAPGEF3O95398 923 aa17■□□□□ 0.31
ITGA3-210ENST00000507771 HNRNPMP52272 730 aaKnown RBP eCLIP17■□□□□ 0.31
ITGA3-210ENST00000507771 POGZQ7Z3K3 1410 aa17■□□□□ 0.31
ITGA3-210ENST00000507771 MYT1LQ9UL68 1186 aa17■□□□□ 0.31
ITGA3-210ENST00000507771 TCOF1Q13428 1488 aaKnown RBP16.98■□□□□ 0.31
ITGA3-210ENST00000507771 TSPY4P0CV99 314 aa16.97■□□□□ 0.31
ITGA3-210ENST00000507771 TSPY10P0CW01 314 aa16.97■□□□□ 0.31
ITGA3-210ENST00000507771 COL17A1Q9UMD9 1497 aaPredicted RBP16.97■□□□□ 0.31
ITGA3-210ENST00000507771 AFAP1Q8N556 730 aa16.96■□□□□ 0.31
ITGA3-210ENST00000507771 CCDC141Q6ZP82 1450 aa16.96■□□□□ 0.31
ITGA3-210ENST00000507771 ARHGEF12Q9NZN5 1544 aa16.96■□□□□ 0.3
ITGA3-210ENST00000507771 RICTORQ6R327 1708 aa16.95■□□□□ 0.3
ITGA3-210ENST00000507771 TRAPPC8Q9Y2L5 1435 aa16.95■□□□□ 0.3
ITGA3-210ENST00000507771 SPAG9O60271 1321 aaKnown RBP16.95■□□□□ 0.3
ITGA3-210ENST00000507771 ARHGEF5Q12774 1597 aa16.94■□□□□ 0.3
ITGA3-210ENST00000507771 MBD5Q9P267 1494 aa16.94■□□□□ 0.3
ITGA3-210ENST00000507771 RRBP1Q9P2E9 1410 aaKnown RBP16.94■□□□□ 0.3
ITGA3-210ENST00000507771 MAGI2Q86UL8 1455 aa16.93■□□□□ 0.3
ITGA3-210ENST00000507771 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.93■□□□□ 0.3
ITGA3-210ENST00000507771 KDM5CP41229 1560 aa16.92■□□□□ 0.3
ITGA3-210ENST00000507771 ZMYM4Q5VZL5 1548 aa16.91■□□□□ 0.3
ITGA3-210ENST00000507771 FRMPD1Q5SYB0 1578 aa16.91■□□□□ 0.3
ITGA3-210ENST00000507771 MLH3Q9UHC1 1453 aa16.9■□□□□ 0.3
ITGA3-210ENST00000507771 HECW2Q9P2P5 1572 aa16.89■□□□□ 0.3
ITGA3-210ENST00000507771 DAPK1P53355 1430 aa16.89■□□□□ 0.29
ITGA3-210ENST00000507771 ZFYVE16Q7Z3T8 1539 aa16.89■□□□□ 0.29
ITGA3-210ENST00000507771 DNMT1P26358 1616 aaKnown RBP16.88■□□□□ 0.29
ITGA3-210ENST00000507771 RTEL1-TNFRSF6BF6WH68 1400 aa16.87■□□□□ 0.29
ITGA3-210ENST00000507771 SHANK2Q9UPX8 1470 aa16.87■□□□□ 0.29
ITGA3-210ENST00000507771 ITGAEP38570 1179 aa16.87■□□□□ 0.29
ITGA3-210ENST00000507771 ABCC5O15440 1437 aa16.87■□□□□ 0.29
ITGA3-210ENST00000507771 C9orf84Q5VXU9 1444 aa16.87■□□□□ 0.29
ITGA3-210ENST00000507771 ATP7AQ04656 1500 aa16.86■□□□□ 0.29
ITGA3-210ENST00000507771 ARHGEF40Q8TER5 1519 aa16.84■□□□□ 0.29
ITGA3-210ENST00000507771 INO80Q9ULG1 1556 aaPredicted RBP16.84■□□□□ 0.29
ITGA3-210ENST00000507771 MAST1Q9Y2H9 1570 aa16.84■□□□□ 0.29
ITGA3-210ENST00000507771 CROCC2H7BZ55 1655 aa16.84■□□□□ 0.29
ITGA3-210ENST00000507771 ATP10AO60312 1499 aa16.82■□□□□ 0.28
ITGA3-210ENST00000507771 YEATS2Q9ULM3 1422 aa16.82■□□□□ 0.28
ITGA3-210ENST00000507771 ANKRD30AQ9BXX3 1397 aa16.82■□□□□ 0.28
ITGA3-210ENST00000507771 CHIC2Q9UKJ5 165 aa16.82■□□□□ 0.28
ITGA3-210ENST00000507771 KIDINS220Q9ULH0 1771 aa16.82■□□□□ 0.28
ITGA3-210ENST00000507771 ARID4BQ4LE39 1312 aaPredicted RBP16.79■□□□□ 0.28
ITGA3-210ENST00000507771 ABCA6Q8N139 1617 aa16.79■□□□□ 0.28
ITGA3-210ENST00000507771 DIP2CQ9Y2E4 1556 aa16.79■□□□□ 0.28
ITGA3-210ENST00000507771 ADGBQ8N7X0 1667 aa16.78■□□□□ 0.28
ITGA3-210ENST00000507771 PLXNC1O60486 1568 aa16.78■□□□□ 0.28
ITGA3-210ENST00000507771 ROCK1Q13464 1354 aa16.77■□□□□ 0.28
ITGA3-210ENST00000507771 RRP7BPQ9NSQ0 103 aa16.77■□□□□ 0.28
ITGA3-210ENST00000507771 ADGRL2O95490 1459 aa16.77■□□□□ 0.28
ITGA3-210ENST00000507771 A2MP01023 1474 aa16.77■□□□□ 0.28
ITGA3-210ENST00000507771 KIF15Q9NS87 1388 aa16.77■□□□□ 0.27
ITGA3-210ENST00000507771 NCOA1Q15788 1441 aa16.76■□□□□ 0.27
ITGA3-210ENST00000507771 DHX29Q7Z478 1369 aaKnown RBP16.76■□□□□ 0.27
ITGA3-210ENST00000507771 REREQ9P2R6 1566 aa16.75■□□□□ 0.27
ITGA3-210ENST00000507771 DUOX2Q9NRD8 1548 aa16.75■□□□□ 0.27
ITGA3-210ENST00000507771 PTPRKQ15262 1439 aa16.74■□□□□ 0.27
ITGA3-210ENST00000507771 TRIM26Q12899 539 aaPredicted RBP16.72■□□□□ 0.27
ITGA3-210ENST00000507771 ERBINQ96RT1 1412 aa16.7■□□□□ 0.26
ITGA3-210ENST00000507771 AGLP35573 1532 aa16.7■□□□□ 0.26
ITGA3-210ENST00000507771 KIF3BO15066 747 aa16.68■□□□□ 0.26
ITGA3-210ENST00000507771 ESF1Q9H501 851 aaKnown RBP16.68■□□□□ 0.26
ITGA3-210ENST00000507771 ANKRD50Q9ULJ7 1429 aa16.68■□□□□ 0.26
ITGA3-210ENST00000507771 MLECQ14165 292 aa16.67■□□□□ 0.26
ITGA3-210ENST00000507771 EIF2AK4Q9P2K8 1649 aaKnown RBP16.67■□□□□ 0.26
ITGA3-210ENST00000507771 HFM1A2PYH4 1435 aa16.66■□□□□ 0.26
ITGA3-210ENST00000507771 GGT6Q6P531 493 aa16.65■□□□□ 0.26
ITGA3-210ENST00000507771 PPP6R1Q9UPN7 881 aa16.64■□□□□ 0.25
ITGA3-210ENST00000507771 ACIN1Q9UKV3 1341 aaKnown RBP16.63■□□□□ 0.25
ITGA3-210ENST00000507771 KANK1Q14678 1352 aa16.63■□□□□ 0.25
ITGA3-210ENST00000507771 NAIPQ13075 1403 aa16.62■□□□□ 0.25
ITGA3-210ENST00000507771 BCORL1Q5H9F3 1711 aa16.62■□□□□ 0.25
ITGA3-210ENST00000507771 GCC2Q8IWJ2 1684 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms