RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 FANCAO15360 1455 aa30.91■■■□□ 2.54
USP53-203ENST00000507597 ITSN2Q9NZM3 1697 aa30.9■■■□□ 2.54
USP53-203ENST00000507597 PREX2Q70Z35 1606 aa30.88■■■□□ 2.53
USP53-203ENST00000507597 PPARGC1BQ86YN6 1023 aaKnown RBP30.88■■■□□ 2.53
USP53-203ENST00000507597 MYOM3Q5VTT5 1437 aa30.87■■■□□ 2.53
USP53-203ENST00000507597 ZNF777Q9ULD5 760 aaPredicted RBP30.86■■■□□ 2.53
USP53-203ENST00000507597 MIA2Q96PC5 1412 aa30.86■■■□□ 2.53
USP53-203ENST00000507597 CDC42BPAQ5VT25 1732 aa30.85■■■□□ 2.53
USP53-203ENST00000507597 AKNAQ7Z591 1439 aa30.85■■■□□ 2.53
USP53-203ENST00000507597 PPRC1Q5VV67 1664 aaKnown RBP30.84■■■□□ 2.53
USP53-203ENST00000507597 PLEKHH2Q8IVE3 1493 aa30.82■■■□□ 2.53
USP53-203ENST00000507597 CDC42BPBQ9Y5S2 1711 aa30.81■■■□□ 2.52
USP53-203ENST00000507597 ADGRL1O94910 1474 aa30.76■■■□□ 2.52
USP53-203ENST00000507597 RSPH4AQ5TD94 716 aa30.76■■■□□ 2.51
USP53-203ENST00000507597 SCAPERQ9BY12 1400 aa30.73■■■□□ 2.51
USP53-203ENST00000507597 KIAA1107Q9UPP5 1409 aa30.73■■■□□ 2.51
USP53-203ENST00000507597 DENND4BO75064 1496 aaPredicted RBP30.73■■■□□ 2.51
USP53-203ENST00000507597 FGD6Q6ZV73 1430 aa30.73■■■□□ 2.51
USP53-203ENST00000507597 KDM6BO15054 1643 aa30.69■■■□□ 2.5
USP53-203ENST00000507597 CAMSAP2Q08AD1 1489 aa30.66■■■□□ 2.5
USP53-203ENST00000507597 SAMD9LQ8IVG5 1584 aa30.66■■■□□ 2.5
USP53-203ENST00000507597 ABCC1P33527 1531 aa30.65■■■□□ 2.5
USP53-203ENST00000507597 HNRNPMP52272 730 aaKnown RBP eCLIP30.65■■■□□ 2.5
USP53-203ENST00000507597 ZNF644Q9H582 1327 aaPredicted RBP30.65■■■□□ 2.5
USP53-203ENST00000507597 PTPN23Q9H3S7 1636 aa30.63■■■□□ 2.49
USP53-203ENST00000507597 FAM50AQ14320 339 aaKnown RBP30.63■■■□□ 2.49
USP53-203ENST00000507597 ZNF518AQ6AHZ1 1483 aa30.63■■■□□ 2.49
USP53-203ENST00000507597 RAPGEF3O95398 923 aa30.61■■■□□ 2.49
USP53-203ENST00000507597 TSPY4P0CV99 314 aa30.61■■■□□ 2.49
USP53-203ENST00000507597 TSPY10P0CW01 314 aa30.61■■■□□ 2.49
USP53-203ENST00000507597 TCOF1Q13428 1488 aaKnown RBP30.61■■■□□ 2.49
USP53-203ENST00000507597 POGZQ7Z3K3 1410 aa30.6■■■□□ 2.49
USP53-203ENST00000507597 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.59■■■□□ 2.49
USP53-203ENST00000507597 MYT1LQ9UL68 1186 aa30.59■■■□□ 2.49
USP53-203ENST00000507597 SYCP2Q9BX26 1530 aa30.58■■■□□ 2.49
USP53-203ENST00000507597 COL17A1Q9UMD9 1497 aaPredicted RBP30.57■■■□□ 2.48
USP53-203ENST00000507597 AFAP1Q8N556 730 aa30.56■■■□□ 2.48
USP53-203ENST00000507597 RRBP1Q9P2E9 1410 aaKnown RBP30.56■■■□□ 2.48
USP53-203ENST00000507597 ARHGEF12Q9NZN5 1544 aa30.54■■■□□ 2.48
USP53-203ENST00000507597 CCDC141Q6ZP82 1450 aa30.54■■■□□ 2.48
USP53-203ENST00000507597 MBD5Q9P267 1494 aa30.54■■■□□ 2.48
USP53-203ENST00000507597 TRAPPC8Q9Y2L5 1435 aa30.53■■■□□ 2.48
USP53-203ENST00000507597 ARHGEF5Q12774 1597 aa30.53■■■□□ 2.48
USP53-203ENST00000507597 SPAG9O60271 1321 aaKnown RBP30.52■■■□□ 2.48
USP53-203ENST00000507597 MAGI2Q86UL8 1455 aa30.52■■■□□ 2.48
USP53-203ENST00000507597 RICTORQ6R327 1708 aa30.49■■■□□ 2.47
USP53-203ENST00000507597 KDM5CP41229 1560 aa30.45■■■□□ 2.47
USP53-203ENST00000507597 MLH3Q9UHC1 1453 aa30.45■■■□□ 2.47
USP53-203ENST00000507597 ZMYM4Q5VZL5 1548 aa30.45■■■□□ 2.47
USP53-203ENST00000507597 RTEL1-TNFRSF6BF6WH68 1400 aa30.45■■■□□ 2.46
USP53-203ENST00000507597 DAPK1P53355 1430 aa30.43■■■□□ 2.46
USP53-203ENST00000507597 FRMPD1Q5SYB0 1578 aa30.43■■■□□ 2.46
USP53-203ENST00000507597 ABCC5O15440 1437 aa30.41■■■□□ 2.46
USP53-203ENST00000507597 DNMT1P26358 1616 aaKnown RBP30.4■■■□□ 2.46
USP53-203ENST00000507597 HECW2Q9P2P5 1572 aa30.4■■■□□ 2.46
USP53-203ENST00000507597 SHANK2Q9UPX8 1470 aa30.39■■■□□ 2.46
USP53-203ENST00000507597 C9orf84Q5VXU9 1444 aa30.38■■■□□ 2.45
USP53-203ENST00000507597 ZFYVE16Q7Z3T8 1539 aa30.37■■■□□ 2.45
USP53-203ENST00000507597 ITGAEP38570 1179 aa30.36■■■□□ 2.45
USP53-203ENST00000507597 AEBP2Q6ZN18 517 aaPredicted RBP30.35■■■□□ 2.45
USP53-203ENST00000507597 ATP7AQ04656 1500 aa30.35■■■□□ 2.45
USP53-203ENST00000507597 MAST1Q9Y2H9 1570 aa30.34■■■□□ 2.45
USP53-203ENST00000507597 ANKRD30AQ9BXX3 1397 aa30.34■■■□□ 2.45
USP53-203ENST00000507597 CHIC2Q9UKJ5 165 aa30.31■■■□□ 2.44
USP53-203ENST00000507597 ATP10AO60312 1499 aa30.31■■■□□ 2.44
USP53-203ENST00000507597 INO80Q9ULG1 1556 aaPredicted RBP30.29■■■□□ 2.44
USP53-203ENST00000507597 ARHGEF40Q8TER5 1519 aa30.28■■■□□ 2.44
USP53-203ENST00000507597 CROCC2H7BZ55 1655 aa30.28■■■□□ 2.44
USP53-203ENST00000507597 YEATS2Q9ULM3 1422 aa30.28■■■□□ 2.44
USP53-203ENST00000507597 KIDINS220Q9ULH0 1771 aa30.27■■■□□ 2.44
USP53-203ENST00000507597 ROCK1Q13464 1354 aa30.26■■■□□ 2.43
USP53-203ENST00000507597 ADGRL2O95490 1459 aa30.24■■■□□ 2.43
USP53-203ENST00000507597 TRIM26Q12899 539 aaPredicted RBP30.22■■■□□ 2.43
USP53-203ENST00000507597 RRP7BPQ9NSQ0 103 aa30.22■■■□□ 2.43
USP53-203ENST00000507597 NCOA1Q15788 1441 aa30.22■■■□□ 2.43
USP53-203ENST00000507597 PLXNC1O60486 1568 aa30.21■■■□□ 2.43
USP53-203ENST00000507597 DIP2CQ9Y2E4 1556 aa30.21■■■□□ 2.43
USP53-203ENST00000507597 A2MP01023 1474 aa30.21■■■□□ 2.43
USP53-203ENST00000507597 DHX29Q7Z478 1369 aaKnown RBP30.21■■■□□ 2.43
USP53-203ENST00000507597 KIF15Q9NS87 1388 aa30.21■■■□□ 2.43
USP53-203ENST00000507597 ARID4BQ4LE39 1312 aaPredicted RBP30.21■■■□□ 2.43
USP53-203ENST00000507597 ADGBQ8N7X0 1667 aa30.19■■■□□ 2.42
USP53-203ENST00000507597 ABCA6Q8N139 1617 aa30.18■■■□□ 2.42
USP53-203ENST00000507597 PTPRKQ15262 1439 aa30.18■■■□□ 2.42
USP53-203ENST00000507597 REREQ9P2R6 1566 aa30.18■■■□□ 2.42
USP53-203ENST00000507597 DUOX2Q9NRD8 1548 aa30.17■■■□□ 2.42
USP53-203ENST00000507597 AGLP35573 1532 aa30.11■■■□□ 2.41
USP53-203ENST00000507597 ERBINQ96RT1 1412 aa30.1■■■□□ 2.41
USP53-203ENST00000507597 ACIN1Q9UKV3 1341 aaKnown RBP30.08■■■□□ 2.41
USP53-203ENST00000507597 KIF3BO15066 747 aa30.08■■■□□ 2.41
USP53-203ENST00000507597 ANKRD50Q9ULJ7 1429 aa30.07■■■□□ 2.4
USP53-203ENST00000507597 PPP6R1Q9UPN7 881 aa30.05■■■□□ 2.4
USP53-203ENST00000507597 ESF1Q9H501 851 aaKnown RBP30.04■■■□□ 2.4
USP53-203ENST00000507597 HFM1A2PYH4 1435 aa30.04■■■□□ 2.4
USP53-203ENST00000507597 EIF2AK4Q9P2K8 1649 aaKnown RBP30.01■■■□□ 2.39
USP53-203ENST00000507597 MLECQ14165 292 aa30■■■□□ 2.39
USP53-203ENST00000507597 GGT6Q6P531 493 aa30■■■□□ 2.39
USP53-203ENST00000507597 NAIPQ13075 1403 aa29.98■■■□□ 2.39
USP53-203ENST00000507597 KANK1Q14678 1352 aa29.96■■■□□ 2.39
USP53-203ENST00000507597 SETD5Q9C0A6 1442 aa29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms