RNA–Protein interactions for RNA: ENST00000507594.1

SMAD1-207, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-207ENST00000507594 TTC37Q6PGP7 1564 aa13.95□□□□□ -0.18
SMAD1-207ENST00000507594 CCNB3Q8WWL7 1395 aa13.95□□□□□ -0.18
SMAD1-207ENST00000507594 KIF13AQ9H1H9 1805 aa13.94□□□□□ -0.18
SMAD1-207ENST00000507594 MYO5CQ9NQX4 1742 aa13.94□□□□□ -0.18
SMAD1-207ENST00000507594 NCOA2Q15596 1464 aa13.93□□□□□ -0.18
SMAD1-207ENST00000507594 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.93□□□□□ -0.18
SMAD1-207ENST00000507594 ITSN2Q9NZM3 1697 aa13.92□□□□□ -0.18
SMAD1-207ENST00000507594 ABCA9Q8IUA7 1624 aa13.92□□□□□ -0.18
SMAD1-207ENST00000507594 GLI2P10070 1586 aa13.92□□□□□ -0.18
SMAD1-207ENST00000507594 CD109Q6YHK3 1445 aa13.9□□□□□ -0.18
SMAD1-207ENST00000507594 ARHGAP5Q13017 1502 aa13.9□□□□□ -0.18
SMAD1-207ENST00000507594 ZNF777Q9ULD5 760 aaPredicted RBP13.89□□□□□ -0.19
SMAD1-207ENST00000507594 MAP3K4Q9Y6R4 1608 aa13.89□□□□□ -0.19
SMAD1-207ENST00000507594 CDC42BPAQ5VT25 1732 aa13.88□□□□□ -0.19
SMAD1-207ENST00000507594 PREX2Q70Z35 1606 aa13.88□□□□□ -0.19
SMAD1-207ENST00000507594 TEX14Q8IWB6 1497 aa13.87□□□□□ -0.19
SMAD1-207ENST00000507594 CFDP1Q9UEE9 299 aaPredicted RBP13.86□□□□□ -0.19
SMAD1-207ENST00000507594 CFAP74Q9C0B2 1584 aa13.86□□□□□ -0.19
SMAD1-207ENST00000507594 MYOM3Q5VTT5 1437 aa13.85□□□□□ -0.19
SMAD1-207ENST00000507594 MAPK8IP2Q13387 824 aaPredicted RBP13.85□□□□□ -0.19
SMAD1-207ENST00000507594 PHLDB1Q86UU1 1377 aa13.84□□□□□ -0.19
SMAD1-207ENST00000507594 GPATCH8Q9UKJ3 1502 aaKnown RBP13.84□□□□□ -0.19
SMAD1-207ENST00000507594 CDC42BPBQ9Y5S2 1711 aa13.84□□□□□ -0.19
SMAD1-207ENST00000507594 PLCH2O75038 1416 aa13.83□□□□□ -0.2
SMAD1-207ENST00000507594 FANCAO15360 1455 aa13.83□□□□□ -0.2
SMAD1-207ENST00000507594 EFCAB2Q5VUJ9 269 aa13.83□□□□□ -0.2
SMAD1-207ENST00000507594 FAM50AQ14320 339 aaKnown RBP13.82□□□□□ -0.2
SMAD1-207ENST00000507594 PPRC1Q5VV67 1664 aaKnown RBP13.81□□□□□ -0.2
SMAD1-207ENST00000507594 ARAP3Q8WWN8 1544 aa13.8□□□□□ -0.2
SMAD1-207ENST00000507594 PTPN23Q9H3S7 1636 aa13.8□□□□□ -0.2
SMAD1-207ENST00000507594 FGD6Q6ZV73 1430 aa13.8□□□□□ -0.2
SMAD1-207ENST00000507594 MYT1LQ9UL68 1186 aa13.79□□□□□ -0.2
SMAD1-207ENST00000507594 ADGRL1O94910 1474 aa13.79□□□□□ -0.2
SMAD1-207ENST00000507594 CAMSAP2Q08AD1 1489 aa13.79□□□□□ -0.2
SMAD1-207ENST00000507594 AKNAQ7Z591 1439 aa13.78□□□□□ -0.2
SMAD1-207ENST00000507594 MIA2Q96PC5 1412 aa13.78□□□□□ -0.2
SMAD1-207ENST00000507594 NEO1Q92859 1461 aa13.78□□□□□ -0.2
SMAD1-207ENST00000507594 SAMD9LQ8IVG5 1584 aa13.78□□□□□ -0.2
SMAD1-207ENST00000507594 PLEKHH2Q8IVE3 1493 aa13.77□□□□□ -0.21
SMAD1-207ENST00000507594 SYCP2Q9BX26 1530 aa13.76□□□□□ -0.21
SMAD1-207ENST00000507594 ABCC1P33527 1531 aa13.75□□□□□ -0.21
SMAD1-207ENST00000507594 ZNF644Q9H582 1327 aaPredicted RBP13.75□□□□□ -0.21
SMAD1-207ENST00000507594 ITGAEP38570 1179 aa13.75□□□□□ -0.21
SMAD1-207ENST00000507594 KDM6BO15054 1643 aa13.75□□□□□ -0.21
SMAD1-207ENST00000507594 SCAPERQ9BY12 1400 aa13.74□□□□□ -0.21
SMAD1-207ENST00000507594 HNRNPMP52272 730 aaKnown RBP eCLIP13.73□□□□□ -0.21
SMAD1-207ENST00000507594 DENND4BO75064 1496 aaPredicted RBP13.72□□□□□ -0.21
SMAD1-207ENST00000507594 HOXD11P31277 338 aaPredicted RBP13.71□□□□□ -0.21
SMAD1-207ENST00000507594 TCOF1Q13428 1488 aaKnown RBP13.7□□□□□ -0.22
SMAD1-207ENST00000507594 CCDC141Q6ZP82 1450 aa13.7□□□□□ -0.22
SMAD1-207ENST00000507594 RRBP1Q9P2E9 1410 aaKnown RBP13.7□□□□□ -0.22
SMAD1-207ENST00000507594 DMRT2Q9Y5R5 561 aa13.69□□□□□ -0.22
SMAD1-207ENST00000507594 POGZQ7Z3K3 1410 aa13.69□□□□□ -0.22
SMAD1-207ENST00000507594 ZNF518AQ6AHZ1 1483 aa13.68□□□□□ -0.22
SMAD1-207ENST00000507594 KIAA1107Q9UPP5 1409 aa13.68□□□□□ -0.22
SMAD1-207ENST00000507594 RAPGEF3O95398 923 aa13.68□□□□□ -0.22
SMAD1-207ENST00000507594 TSPY4P0CV99 314 aa13.68□□□□□ -0.22
SMAD1-207ENST00000507594 TSPY10P0CW01 314 aa13.68□□□□□ -0.22
SMAD1-207ENST00000507594 DNMT1P26358 1616 aaKnown RBP13.68□□□□□ -0.22
SMAD1-207ENST00000507594 ARHGEF5Q12774 1597 aa13.67□□□□□ -0.22
SMAD1-207ENST00000507594 ARHGEF12Q9NZN5 1544 aa13.67□□□□□ -0.22
SMAD1-207ENST00000507594 SPAG9O60271 1321 aaKnown RBP13.66□□□□□ -0.22
SMAD1-207ENST00000507594 CROCC2H7BZ55 1655 aa13.66□□□□□ -0.22
SMAD1-207ENST00000507594 TRAPPC8Q9Y2L5 1435 aa13.66□□□□□ -0.22
SMAD1-207ENST00000507594 AFAP1Q8N556 730 aa13.66□□□□□ -0.22
SMAD1-207ENST00000507594 CHIC2Q9UKJ5 165 aa13.66□□□□□ -0.22
SMAD1-207ENST00000507594 RICTORQ6R327 1708 aa13.66□□□□□ -0.22
SMAD1-207ENST00000507594 DAPK1P53355 1430 aa13.65□□□□□ -0.22
SMAD1-207ENST00000507594 HECW2Q9P2P5 1572 aa13.64□□□□□ -0.23
SMAD1-207ENST00000507594 RSPH4AQ5TD94 716 aa13.64□□□□□ -0.23
SMAD1-207ENST00000507594 C9orf84Q5VXU9 1444 aa13.64□□□□□ -0.23
SMAD1-207ENST00000507594 ADGBQ8N7X0 1667 aa13.63□□□□□ -0.23
SMAD1-207ENST00000507594 FRMPD1Q5SYB0 1578 aa13.63□□□□□ -0.23
SMAD1-207ENST00000507594 MBD5Q9P267 1494 aa13.63□□□□□ -0.23
SMAD1-207ENST00000507594 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.62□□□□□ -0.23
SMAD1-207ENST00000507594 TRIM26Q12899 539 aaPredicted RBP13.62□□□□□ -0.23
SMAD1-207ENST00000507594 ATP7AQ04656 1500 aa13.62□□□□□ -0.23
SMAD1-207ENST00000507594 ZFYVE16Q7Z3T8 1539 aa13.62□□□□□ -0.23
SMAD1-207ENST00000507594 ABCC5O15440 1437 aa13.62□□□□□ -0.23
SMAD1-207ENST00000507594 COL17A1Q9UMD9 1497 aaPredicted RBP13.61□□□□□ -0.23
SMAD1-207ENST00000507594 KDM5CP41229 1560 aa13.61□□□□□ -0.23
SMAD1-207ENST00000507594 SHANK2Q9UPX8 1470 aa13.61□□□□□ -0.23
SMAD1-207ENST00000507594 INO80Q9ULG1 1556 aaPredicted RBP13.6□□□□□ -0.23
SMAD1-207ENST00000507594 ZMYM4Q5VZL5 1548 aa13.59□□□□□ -0.23
SMAD1-207ENST00000507594 ANKRD30AQ9BXX3 1397 aa13.58□□□□□ -0.23
SMAD1-207ENST00000507594 MAST1Q9Y2H9 1570 aa13.58□□□□□ -0.23
SMAD1-207ENST00000507594 ARHGEF40Q8TER5 1519 aa13.58□□□□□ -0.24
SMAD1-207ENST00000507594 RRP7BPQ9NSQ0 103 aa13.57□□□□□ -0.24
SMAD1-207ENST00000507594 KIDINS220Q9ULH0 1771 aa13.57□□□□□ -0.24
SMAD1-207ENST00000507594 ABCA6Q8N139 1617 aa13.57□□□□□ -0.24
SMAD1-207ENST00000507594 MAGI2Q86UL8 1455 aa13.56□□□□□ -0.24
SMAD1-207ENST00000507594 MLH3Q9UHC1 1453 aa13.56□□□□□ -0.24
SMAD1-207ENST00000507594 KIF15Q9NS87 1388 aa13.56□□□□□ -0.24
SMAD1-207ENST00000507594 YEATS2Q9ULM3 1422 aa13.56□□□□□ -0.24
SMAD1-207ENST00000507594 PLXNC1O60486 1568 aa13.55□□□□□ -0.24
SMAD1-207ENST00000507594 DIP2CQ9Y2E4 1556 aa13.55□□□□□ -0.24
SMAD1-207ENST00000507594 ARID4BQ4LE39 1312 aaPredicted RBP13.55□□□□□ -0.24
SMAD1-207ENST00000507594 RTEL1-TNFRSF6BF6WH68 1400 aa13.55□□□□□ -0.24
SMAD1-207ENST00000507594 PTPRKQ15262 1439 aa13.55□□□□□ -0.24
SMAD1-207ENST00000507594 PCGF6Q9BYE7 350 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms