RNA–Protein interactions for RNA: ENST00000507472.5

SSBP2-207, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 3

Gene SSBP2, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-207ENST00000507472 POGZQ7Z3K3 1410 aa25.8■■□□□ 1.72
SSBP2-207ENST00000507472 MAGI2Q86UL8 1455 aa25.79■■□□□ 1.72
SSBP2-207ENST00000507472 ZFYVE16Q7Z3T8 1539 aa25.78■■□□□ 1.72
SSBP2-207ENST00000507472 LRRIQ1Q96JM4 1722 aa25.77■■□□□ 1.72
SSBP2-207ENST00000507472 MYO5CQ9NQX4 1742 aa25.76■■□□□ 1.71
SSBP2-207ENST00000507472 MADDQ8WXG6 1647 aa25.75■■□□□ 1.71
SSBP2-207ENST00000507472 AFAP1Q8N556 730 aa25.74■■□□□ 1.71
SSBP2-207ENST00000507472 PCF11O94913 1555 aaKnown RBP25.73■■□□□ 1.71
SSBP2-207ENST00000507472 ARHGAP5Q13017 1502 aa25.73■■□□□ 1.71
SSBP2-207ENST00000507472 MLECQ14165 292 aa25.73■■□□□ 1.71
SSBP2-207ENST00000507472 CCDC18Q5T9S5 1454 aa25.72■■□□□ 1.71
SSBP2-207ENST00000507472 ILDR1Q86SU0 546 aaPredicted RBP25.72■■□□□ 1.71
SSBP2-207ENST00000507472 PLPPR3Q6T4P5 718 aa25.69■■□□□ 1.7
SSBP2-207ENST00000507472 ATP10AO60312 1499 aa25.68■■□□□ 1.7
SSBP2-207ENST00000507472 SIGLEC1Q9BZZ2 1709 aa25.68■■□□□ 1.7
SSBP2-207ENST00000507472 ZNF518AQ6AHZ1 1483 aa25.66■■□□□ 1.7
SSBP2-207ENST00000507472 FYCO1Q9BQS8 1478 aa25.66■■□□□ 1.7
SSBP2-207ENST00000507472 MYT1LQ9UL68 1186 aa25.66■■□□□ 1.7
SSBP2-207ENST00000507472 RIMS1Q86UR5 1692 aaKnown RBP25.64■■□□□ 1.7
SSBP2-207ENST00000507472 C9orf84Q5VXU9 1444 aa25.63■■□□□ 1.69
SSBP2-207ENST00000507472 CDC42BPBQ9Y5S2 1711 aa25.62■■□□□ 1.69
SSBP2-207ENST00000507472 KDM5CP41229 1560 aa25.59■■□□□ 1.69
SSBP2-207ENST00000507472 LMTK3Q96Q04 1460 aa25.59■■□□□ 1.69
SSBP2-207ENST00000507472 ARHGEF12Q9NZN5 1544 aa25.58■■□□□ 1.69
SSBP2-207ENST00000507472 TRAPPC8Q9Y2L5 1435 aa25.58■■□□□ 1.69
SSBP2-207ENST00000507472 ZNF777Q9ULD5 760 aaPredicted RBP25.57■■□□□ 1.68
SSBP2-207ENST00000507472 PREX2Q70Z35 1606 aa25.56■■□□□ 1.68
SSBP2-207ENST00000507472 HSPA2P54652 639 aa25.55■■□□□ 1.68
SSBP2-207ENST00000507472 MLH3Q9UHC1 1453 aa25.54■■□□□ 1.68
SSBP2-207ENST00000507472 ABCC1P33527 1531 aa25.53■■□□□ 1.68
SSBP2-207ENST00000507472 CEBPAP49715 358 aaPredicted RBP25.52■■□□□ 1.68
SSBP2-207ENST00000507472 GPATCH8Q9UKJ3 1502 aaKnown RBP25.52■■□□□ 1.68
SSBP2-207ENST00000507472 CDC42BPAQ5VT25 1732 aa25.5■■□□□ 1.67
SSBP2-207ENST00000507472 FER1L4A9Z1Z3 1794 aa25.49■■□□□ 1.67
SSBP2-207ENST00000507472 DIP2CQ9Y2E4 1556 aa25.49■■□□□ 1.67
SSBP2-207ENST00000507472 HNRNPMP52272 730 aaKnown RBP eCLIP25.49■■□□□ 1.671e-6■■■■□ 22.8
SSBP2-207ENST00000507472 CFDP1Q9UEE9 299 aaPredicted RBP25.49■■□□□ 1.67
SSBP2-207ENST00000507472 MTUS2Q5JR59 1369 aa25.48■■□□□ 1.67
SSBP2-207ENST00000507472 CEP162Q5TB80 1403 aa25.46■■□□□ 1.67
SSBP2-207ENST00000507472 CCNB3Q8WWL7 1395 aa25.45■■□□□ 1.67
SSBP2-207ENST00000507472 ITSN2Q9NZM3 1697 aa25.45■■□□□ 1.66
SSBP2-207ENST00000507472 ABCA6Q8N139 1617 aa25.45■■□□□ 1.66
SSBP2-207ENST00000507472 REREQ9P2R6 1566 aa25.44■■□□□ 1.66
SSBP2-207ENST00000507472 SPAG9O60271 1321 aaKnown RBP25.42■■□□□ 1.66
SSBP2-207ENST00000507472 SAMD9LQ8IVG5 1584 aa25.42■■□□□ 1.66
SSBP2-207ENST00000507472 AGLP35573 1532 aa25.4■■□□□ 1.66
SSBP2-207ENST00000507472 KIAA1107Q9UPP5 1409 aa25.39■■□□□ 1.66
SSBP2-207ENST00000507472 KIDINS220Q9ULH0 1771 aa25.39■■□□□ 1.66
SSBP2-207ENST00000507472 SYCP2Q9BX26 1530 aa25.39■■□□□ 1.66
SSBP2-207ENST00000507472 ESF1Q9H501 851 aaKnown RBP25.39■■□□□ 1.66
SSBP2-207ENST00000507472 LOC105371045A0A1W2PR82 267 aa25.38■■□□□ 1.65
SSBP2-207ENST00000507472 ZNF644Q9H582 1327 aaPredicted RBP25.37■■□□□ 1.65
SSBP2-207ENST00000507472 FBXO41Q8TF61 875 aa25.36■■□□□ 1.65
SSBP2-207ENST00000507472 PLEKHH2Q8IVE3 1493 aa25.35■■□□□ 1.65
SSBP2-207ENST00000507472 SETD1BQ9UPS6 1966 aaKnown RBP25.3■■□□□ 1.64
SSBP2-207ENST00000507472 EHBP1L1Q8N3D4 1523 aa25.3■■□□□ 1.64
SSBP2-207ENST00000507472 UHRF1BP1Q6BDS2 1440 aa25.28■■□□□ 1.64
SSBP2-207ENST00000507472 ATP7AQ04656 1500 aa25.27■■□□□ 1.64
SSBP2-207ENST00000507472 TIAM1Q13009 1591 aa25.27■■□□□ 1.64
SSBP2-207ENST00000507472 PREX1Q8TCU6 1659 aa25.27■■□□□ 1.64
SSBP2-207ENST00000507472 CNTLNQ9NXG0 1405 aa25.26■■□□□ 1.63
SSBP2-207ENST00000507472 MBD5Q9P267 1494 aa25.25■■□□□ 1.63
SSBP2-207ENST00000507472 A2MP01023 1474 aa25.24■■□□□ 1.63
SSBP2-207ENST00000507472 C3P01024 1663 aa25.23■■□□□ 1.63
SSBP2-207ENST00000507472 GGT6Q6P531 493 aa25.22■■□□□ 1.63
SSBP2-207ENST00000507472 INO80Q9ULG1 1556 aaPredicted RBP25.22■■□□□ 1.63
SSBP2-207ENST00000507472 ZMYM3Q14202 1370 aa25.21■■□□□ 1.63
SSBP2-207ENST00000507472 NCOA2Q15596 1464 aa25.21■■□□□ 1.63
SSBP2-207ENST00000507472 SUPT6HQ7KZ85 1726 aaKnown RBP25.2■■□□□ 1.63
SSBP2-207ENST00000507472 DMRT2Q9Y5R5 561 aa25.2■■□□□ 1.62
SSBP2-207ENST00000507472 CERKQ8TCT0 537 aa25.18■■□□□ 1.62
SSBP2-207ENST00000507472 VPS8Q8N3P4 1428 aa25.18■■□□□ 1.62
SSBP2-207ENST00000507472 PLXNC1O60486 1568 aa25.17■■□□□ 1.62
SSBP2-207ENST00000507472 RTEL1-TNFRSF6BF6WH68 1400 aa25.16■■□□□ 1.62
SSBP2-207ENST00000507472 RSPH4AQ5TD94 716 aa25.15■■□□□ 1.62
SSBP2-207ENST00000507472 NPATQ14207 1427 aa25.13■■□□□ 1.61
SSBP2-207ENST00000507472 PPP6R1Q9UPN7 881 aa25.13■■□□□ 1.61
SSBP2-207ENST00000507472 STRCQ7RTU9 1775 aa25.13■■□□□ 1.61
SSBP2-207ENST00000507472 KANK4Q5T7N3 995 aaPredicted RBP25.12■■□□□ 1.61
SSBP2-207ENST00000507472 DHX29Q7Z478 1369 aaKnown RBP25.12■■□□□ 1.61
SSBP2-207ENST00000507472 CAMSAP2Q08AD1 1489 aa25.11■■□□□ 1.61
SSBP2-207ENST00000507472 LRRC9Q6ZRR7 1453 aa25.1■■□□□ 1.61
SSBP2-207ENST00000507472 MROH2AA6NES4 1674 aa25.1■■□□□ 1.61
SSBP2-207ENST00000507472 CCDC141Q6ZP82 1450 aa25.09■■□□□ 1.61
SSBP2-207ENST00000507472 ADGBQ8N7X0 1667 aa25.08■■□□□ 1.61
SSBP2-207ENST00000507472 KIF3BO15066 747 aa25.08■■□□□ 1.61
SSBP2-207ENST00000507472 TSPY4P0CV99 314 aa25.07■■□□□ 1.6
SSBP2-207ENST00000507472 TSPY10P0CW01 314 aa25.07■■□□□ 1.6
SSBP2-207ENST00000507472 CLTCQ00610 1675 aaKnown RBP25.07■■□□□ 1.6
SSBP2-207ENST00000507472 PTPRTO14522 1441 aa25.05■■□□□ 1.6
SSBP2-207ENST00000507472 PTPRKQ15262 1439 aa25.05■■□□□ 1.6
SSBP2-207ENST00000507472 NCOA1Q15788 1441 aa25.03■■□□□ 1.6
SSBP2-207ENST00000507472 MAP3K1Q13233 1512 aa25.02■■□□□ 1.6
SSBP2-207ENST00000507472 NCKAP5LQ9HCH0 1330 aa24.99■■□□□ 1.59
SSBP2-207ENST00000507472 CAMSAP1Q5T5Y3 1602 aa24.98■■□□□ 1.59
SSBP2-207ENST00000507472 ARHGEF5Q12774 1597 aa24.98■■□□□ 1.59
SSBP2-207ENST00000507472 WASHC2CQ9Y4E1 1318 aa24.97■■□□□ 1.59
SSBP2-207ENST00000507472 FBXO31Q5XUX0 539 aaPredicted RBP24.97■■□□□ 1.59
SSBP2-207ENST00000507472 MYOM3Q5VTT5 1437 aa24.95■■□□□ 1.58
SSBP2-207ENST00000507472 APLP2Q06481 763 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms