RNA–Protein interactions for RNA: ENST00000507428.1

LINC02039-201, Transcript of long intergenic non-protein coding RNA 2039, humanhuman

TSL 4 BASIC

Gene LINC02039, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02039-201ENST00000507428 GPR153Q6NV75 609 aa13.22□□□□□ -0.29
LINC02039-201ENST00000507428 VARS2Q5ST30 1063 aaKnown RBP13.19□□□□□ -0.3
LINC02039-201ENST00000507428 ZNF687Q8N1G0 1237 aa13.16□□□□□ -0.3
LINC02039-201ENST00000507428 ABCC9O60706 1549 aa13.14□□□□□ -0.31
LINC02039-201ENST00000507428 NLRP6P59044 892 aa13.14□□□□□ -0.31
LINC02039-201ENST00000507428 FBXO22Q8NEZ5 403 aa13.14□□□□□ -0.31
LINC02039-201ENST00000507428 RTN4Q9NQC3 1192 aaKnown RBP13.14□□□□□ -0.31
LINC02039-201ENST00000507428 AMER1Q5JTC6 1135 aaPredicted RBP13.12□□□□□ -0.31
LINC02039-201ENST00000507428 BCL11BQ9C0K0 894 aaPredicted RBP13.11□□□□□ -0.31
LINC02039-201ENST00000507428 TAOK2Q9UL54 1235 aa13.11□□□□□ -0.31
LINC02039-201ENST00000507428 ARSIQ5FYB1 569 aa13.09□□□□□ -0.31
LINC02039-201ENST00000507428 RNF166Q96A37 237 aaPredicted RBP13.06□□□□□ -0.32
LINC02039-201ENST00000507428 MFRPQ9BY79 579 aa13.06□□□□□ -0.32
LINC02039-201ENST00000507428 STK24Q9Y6E0 443 aa13.06□□□□□ -0.32
LINC02039-201ENST00000507428 KIF3CO14782 793 aa13.03□□□□□ -0.32
LINC02039-201ENST00000507428 MYT1LQ9UL68 1186 aa13.03□□□□□ -0.32
LINC02039-201ENST00000507428 ZNF316A6NFI3 1004 aaPredicted RBP13.02□□□□□ -0.33
LINC02039-201ENST00000507428 KHSRPQ92945 711 aaKnown RBP eCLIP13.02□□□□□ -0.33
LINC02039-201ENST00000507428 STK25O00506 426 aa12.99□□□□□ -0.33
LINC02039-201ENST00000507428 C2orf72A6NCS6 295 aa12.97□□□□□ -0.33
LINC02039-201ENST00000507428 PTGER2P43116 358 aa12.96□□□□□ -0.33
LINC02039-201ENST00000507428 ECM2O94769 699 aaPredicted RBP12.95□□□□□ -0.34
LINC02039-201ENST00000507428 NISCHQ9Y2I1 1504 aa12.93□□□□□ -0.34
LINC02039-201ENST00000507428 ANKRD13DQ6ZTN6 518 aa12.93□□□□□ -0.34
LINC02039-201ENST00000507428 SLC34A2O95436 690 aa12.92□□□□□ -0.34
LINC02039-201ENST00000507428 DNAJC5Q9H3Z4 198 aa12.92□□□□□ -0.34
LINC02039-201ENST00000507428 PKD2Q13563 968 aa12.9□□□□□ -0.34
LINC02039-201ENST00000507428 RGL2O15211 777 aa12.89□□□□□ -0.35
LINC02039-201ENST00000507428 NUDT7P0C024 238 aa12.89□□□□□ -0.35
LINC02039-201ENST00000507428 LSM11P83369 360 aaKnown RBP eCLIP12.89□□□□□ -0.35
LINC02039-201ENST00000507428 PCDHGA4Q9Y5G9 962 aa12.87□□□□□ -0.35
LINC02039-201ENST00000507428 POTEEQ6S8J3 1075 aa12.85□□□□□ -0.35
LINC02039-201ENST00000507428 LHX6Q9UPM6 363 aa12.85□□□□□ -0.35
LINC02039-201ENST00000507428 PBX2P40425 430 aa12.84□□□□□ -0.35
LINC02039-201ENST00000507428 TMC2Q8TDI7 906 aa12.83□□□□□ -0.36
LINC02039-201ENST00000507428 PPP1R37O75864 691 aa12.82□□□□□ -0.36
LINC02039-201ENST00000507428 AXIN2Q9Y2T1 843 aa12.78□□□□□ -0.36
LINC02039-201ENST00000507428 KDM4FA0A1W2PPD8 638 aa12.76□□□□□ -0.37
LINC02039-201ENST00000507428 SLC24A1O60721 1099 aa12.75□□□□□ -0.37
LINC02039-201ENST00000507428 PTCD2Q8WV60 388 aaKnown RBP12.73□□□□□ -0.37
LINC02039-201ENST00000507428 PSDA5PKW4 1024 aaPredicted RBP12.72□□□□□ -0.37
LINC02039-201ENST00000507428 ARHGAP33O14559 1287 aa12.71□□□□□ -0.37
LINC02039-201ENST00000507428 FOXK1P85037 733 aa12.7□□□□□ -0.38
LINC02039-201ENST00000507428 ADGRD1Q6QNK2 874 aa12.67□□□□□ -0.38
LINC02039-201ENST00000507428 GPHNQ9NQX3 736 aaPredicted RBP12.67□□□□□ -0.38
LINC02039-201ENST00000507428 PLPP6Q8IY26 295 aa12.65□□□□□ -0.38
LINC02039-201ENST00000507428 HCSTQ9UBK5 93 aa12.64□□□□□ -0.39
LINC02039-201ENST00000507428 TK2O00142 265 aa12.63□□□□□ -0.39
LINC02039-201ENST00000507428 HRO43593 1189 aa12.62□□□□□ -0.39
LINC02039-201ENST00000507428 HS6ST3Q8IZP7 471 aa12.62□□□□□ -0.39
LINC02039-201ENST00000507428 DSG2Q14126 1118 aa12.6□□□□□ -0.39
LINC02039-201ENST00000507428 DMRTA1Q5VZB9 504 aa12.6□□□□□ -0.39
LINC02039-201ENST00000507428 TBC1D12O60347 775 aa12.59□□□□□ -0.39
LINC02039-201ENST00000507428 PSEN2P49810 448 aa12.59□□□□□ -0.39
LINC02039-201ENST00000507428 PLA2G2EQ9NZK7 142 aa12.58□□□□□ -0.4
LINC02039-201ENST00000507428 PPP4R3BQ5MIZ7 849 aa12.56□□□□□ -0.4
LINC02039-201ENST00000507428 OXER1Q8TDS5 423 aa12.5□□□□□ -0.41
LINC02039-201ENST00000507428 CHGAP10645 457 aaKnown RBP12.49□□□□□ -0.41
LINC02039-201ENST00000507428 NKX1-1Q15270 411 aaPredicted RBP12.48□□□□□ -0.41
LINC02039-201ENST00000507428 CRISPLD2Q9H0B8 497 aa12.46□□□□□ -0.41
LINC02039-201ENST00000507428 KCTD12Q96CX2 325 aaKnown RBP12.45□□□□□ -0.42
LINC02039-201ENST00000507428 KCNK17Q96T54 332 aa12.45□□□□□ -0.42
LINC02039-201ENST00000507428 STAC3Q96MF2 364 aa12.44□□□□□ -0.42
LINC02039-201ENST00000507428 VPS9D1Q9Y2B5 631 aa12.44□□□□□ -0.42
LINC02039-201ENST00000507428 KCNH8Q96L42 1107 aa12.42□□□□□ -0.42
LINC02039-201ENST00000507428 SLC4A5Q9BY07 1137 aa12.42□□□□□ -0.42
LINC02039-201ENST00000507428 RYDENQ9NUL5 291 aaKnown RBP12.42□□□□□ -0.42
LINC02039-201ENST00000507428 UPF1Q92900 1129 aaKnown RBP eCLIP12.41□□□□□ -0.42
LINC02039-201ENST00000507428 BCL2L12Q9HB09 334 aa12.4□□□□□ -0.42
LINC02039-201ENST00000507428 PPP1R15BQ5SWA1 713 aa12.39□□□□□ -0.43
LINC02039-201ENST00000507428 ZNF454Q8N9F8 522 aa12.39□□□□□ -0.43
LINC02039-201ENST00000507428 ANO8Q9HCE9 1232 aaPredicted RBP12.39□□□□□ -0.43
LINC02039-201ENST00000507428 BHMG1C9JSJ3 638 aaPredicted RBP12.37□□□□□ -0.43
LINC02039-201ENST00000507428 FOSBP53539 338 aa12.37□□□□□ -0.43
LINC02039-201ENST00000507428 PDE4AP27815 886 aa12.36□□□□□ -0.43
LINC02039-201ENST00000507428 NCKAP5LQ9HCH0 1330 aa12.36□□□□□ -0.43
LINC02039-201ENST00000507428 PTPREP23469 700 aa12.32□□□□□ -0.44
LINC02039-201ENST00000507428 PTPN5P54829 565 aa12.32□□□□□ -0.44
LINC02039-201ENST00000507428 ZBED2Q9BTP6 218 aa12.31□□□□□ -0.44
LINC02039-201ENST00000507428 EVI5O60447 810 aa12.29□□□□□ -0.44
LINC02039-201ENST00000507428 IFFO2Q5TF58 517 aa12.29□□□□□ -0.44
LINC02039-201ENST00000507428 JPH4Q96JJ6 628 aa12.29□□□□□ -0.44
LINC02039-201ENST00000507428 GTPBP6O43824 516 aaPredicted RBP12.27□□□□□ -0.45
LINC02039-201ENST00000507428 THSD4Q6ZMP0 1018 aa12.27□□□□□ -0.45
LINC02039-201ENST00000507428 ZDHHC16Q969W1 377 aa12.27□□□□□ -0.45
LINC02039-201ENST00000507428 ADAM33Q9BZ11 813 aa12.26□□□□□ -0.45
LINC02039-201ENST00000507428 LARP6Q9BRS8 491 aaKnown RBP12.24□□□□□ -0.45
LINC02039-201ENST00000507428 RGS20O76081 388 aa12.23□□□□□ -0.45
LINC02039-201ENST00000507428 MRPL50Q8N5N7 158 aaKnown RBP12.23□□□□□ -0.45
LINC02039-201ENST00000507428 WNT2BQ93097 391 aa12.23□□□□□ -0.45
LINC02039-201ENST00000507428 DDX27Q96GQ7 796 aaKnown RBP12.23□□□□□ -0.45
LINC02039-201ENST00000507428 GOLGA8CPA6NN73 597 aa12.22□□□□□ -0.45
LINC02039-201ENST00000507428 MFSD10Q14728 455 aa12.22□□□□□ -0.45
LINC02039-201ENST00000507428 MAP3K9P80192 1104 aa12.21□□□□□ -0.45
LINC02039-201ENST00000507428 NBPF3Q9H094 633 aa12.18□□□□□ -0.46
LINC02039-201ENST00000507428 EMILIN3Q9NT22 766 aa12.18□□□□□ -0.46
LINC02039-201ENST00000507428 PCDHGA10Q9Y5H3 936 aa12.17□□□□□ -0.46
LINC02039-201ENST00000507428 A0A0G2JS52 829 aa12.14□□□□□ -0.47
LINC02039-201ENST00000507428 PPP1R3GB7ZBB8 358 aa12.14□□□□□ -0.47
LINC02039-201ENST00000507428 RABGEF1Q9UJ41 708 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms