RNA–Protein interactions for RNA: ENST00000507063.1

NEDD4-206, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4, Length 457 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-206ENST00000507063 FHAD1B1AJZ9 1412 aa11.54□□□□□ -0.56
NEDD4-206ENST00000507063 SCUBE2Q9NQ36 999 aa11.52□□□□□ -0.57
NEDD4-206ENST00000507063 ERICH3Q5RHP9 1530 aa11.5□□□□□ -0.57
NEDD4-206ENST00000507063 SHROOM2Q13796 1616 aa11.5□□□□□ -0.57
NEDD4-206ENST00000507063 TIE1P35590 1138 aa11.5□□□□□ -0.57
NEDD4-206ENST00000507063 ATN1P54259 1190 aaPredicted RBP11.5□□□□□ -0.57
NEDD4-206ENST00000507063 JPH4Q96JJ6 628 aa11.49□□□□□ -0.57
NEDD4-206ENST00000507063 PRG4Q92954 1404 aaPredicted RBP11.49□□□□□ -0.57
NEDD4-206ENST00000507063 MAP3K13O43283 966 aa11.48□□□□□ -0.57
NEDD4-206ENST00000507063 POTEMA6NI47 508 aa11.47□□□□□ -0.57
NEDD4-206ENST00000507063 RASEFQ8IZ41 740 aa11.47□□□□□ -0.57
NEDD4-206ENST00000507063 SGIP1Q9BQI5 828 aa11.45□□□□□ -0.58
NEDD4-206ENST00000507063 BMP2KQ9NSY1 1161 aaPredicted RBP11.45□□□□□ -0.58
NEDD4-206ENST00000507063 POTEGQ6S5H5 508 aa11.44□□□□□ -0.58
NEDD4-206ENST00000507063 IGF1RP08069 1367 aa11.43□□□□□ -0.58
NEDD4-206ENST00000507063 PCDH10Q9P2E7 1040 aa11.43□□□□□ -0.58
NEDD4-206ENST00000507063 SEC24BO95487 1268 aa11.42□□□□□ -0.58
NEDD4-206ENST00000507063 RUSC2Q8N2Y8 1516 aa11.41□□□□□ -0.58
NEDD4-206ENST00000507063 FAM212AQ96EL1 285 aa11.4□□□□□ -0.58
NEDD4-206ENST00000507063 PCDHB13Q9Y5F0 798 aa11.4□□□□□ -0.58
NEDD4-206ENST00000507063 KIF13AQ9H1H9 1805 aa11.39□□□□□ -0.59
NEDD4-206ENST00000507063 TTBK1Q5TCY1 1321 aaPredicted RBP11.38□□□□□ -0.59
NEDD4-206ENST00000507063 POTEJP0CG39 1038 aa11.38□□□□□ -0.59
NEDD4-206ENST00000507063 FAM69CQ0P6D2 419 aa11.38□□□□□ -0.59
NEDD4-206ENST00000507063 TTLL13PA6NNM8 815 aa11.37□□□□□ -0.59
NEDD4-206ENST00000507063 IER5LQ5T953 404 aa11.37□□□□□ -0.59
NEDD4-206ENST00000507063 KIF27Q86VH2 1401 aa11.36□□□□□ -0.59
NEDD4-206ENST00000507063 TRPC6Q9Y210 931 aa11.36□□□□□ -0.59
NEDD4-206ENST00000507063 KIAA0586Q9BVV6 1533 aa11.35□□□□□ -0.59
NEDD4-206ENST00000507063 ADCY10Q96PN6 1610 aa11.35□□□□□ -0.59
NEDD4-206ENST00000507063 ABCC10Q5T3U5 1492 aa11.33□□□□□ -0.6
NEDD4-206ENST00000507063 CARMIL1Q5VZK9 1371 aa11.33□□□□□ -0.6
NEDD4-206ENST00000507063 NUBP1P53384 320 aa11.33□□□□□ -0.6
NEDD4-206ENST00000507063 FAM163AQ96GL9 167 aaPredicted RBP11.33□□□□□ -0.6
NEDD4-206ENST00000507063 TRIM35Q9UPQ4 493 aa11.32□□□□□ -0.6
NEDD4-206ENST00000507063 CUL7Q14999 1698 aa11.3□□□□□ -0.6
NEDD4-206ENST00000507063 DIP2BQ9P265 1576 aa11.3□□□□□ -0.6
NEDD4-206ENST00000507063 POTEFA5A3E0 1075 aa11.3□□□□□ -0.6
NEDD4-206ENST00000507063 FBXO3Q9UK99 471 aa11.3□□□□□ -0.6
NEDD4-206ENST00000507063 MAPKBP1O60336 1514 aa11.3□□□□□ -0.6
NEDD4-206ENST00000507063 PTPRGP23470 1445 aa11.28□□□□□ -0.6
NEDD4-206ENST00000507063 IFNL1Q8IU54 200 aa11.26□□□□□ -0.61
NEDD4-206ENST00000507063 COLQQ9Y215 455 aaPredicted RBP11.26□□□□□ -0.61
NEDD4-206ENST00000507063 TSPOAP1O95153 1857 aa11.25□□□□□ -0.61
NEDD4-206ENST00000507063 TMEM106CQ9BVX2 250 aa11.25□□□□□ -0.61
NEDD4-206ENST00000507063 TNIKQ9UKE5 1360 aa11.24□□□□□ -0.61
NEDD4-206ENST00000507063 DISP1Q96F81 1524 aa11.24□□□□□ -0.61
NEDD4-206ENST00000507063 KDM4FA0A1W2PPD8 638 aa11.23□□□□□ -0.61
NEDD4-206ENST00000507063 PLCG2P16885 1265 aa11.23□□□□□ -0.61
NEDD4-206ENST00000507063 DCAF8Q5TAQ9 597 aa11.23□□□□□ -0.61
NEDD4-206ENST00000507063 IQGAP2Q13576 1575 aa11.23□□□□□ -0.61
NEDD4-206ENST00000507063 CARMIL2Q6F5E8 1435 aa11.21□□□□□ -0.61
NEDD4-206ENST00000507063 ASXL2Q76L83 1435 aa11.21□□□□□ -0.61
NEDD4-206ENST00000507063 KDM6BO15054 1643 aa11.2□□□□□ -0.62
NEDD4-206ENST00000507063 ABCC2Q92887 1545 aa11.2□□□□□ -0.62
NEDD4-206ENST00000507063 RAPGEF2Q9Y4G8 1499 aa11.19□□□□□ -0.62
NEDD4-206ENST00000507063 UACAQ9BZF9 1416 aa11.18□□□□□ -0.62
NEDD4-206ENST00000507063 VASPP50552 380 aaPredicted RBP11.17□□□□□ -0.62
NEDD4-206ENST00000507063 LCE2DQ5TA82 110 aaPredicted RBP11.17□□□□□ -0.62
NEDD4-206ENST00000507063 SLAIN1Q8ND83 568 aa11.17□□□□□ -0.62
NEDD4-206ENST00000507063 PPRC1Q5VV67 1664 aaKnown RBP11.17□□□□□ -0.62
NEDD4-206ENST00000507063 UHRF1BP1LA0JNW5 1464 aa11.16□□□□□ -0.62
NEDD4-206ENST00000507063 COL17A1Q9UMD9 1497 aaPredicted RBP11.16□□□□□ -0.62
NEDD4-206ENST00000507063 UGGT2Q9NYU1 1516 aa11.15□□□□□ -0.62
NEDD4-206ENST00000507063 PLB1Q6P1J6 1458 aa11.15□□□□□ -0.62
NEDD4-206ENST00000507063 KDM5BQ9UGL1 1544 aa11.14□□□□□ -0.63
NEDD4-206ENST00000507063 KIAA0556O60303 1618 aa11.13□□□□□ -0.63
NEDD4-206ENST00000507063 GLI2P10070 1586 aa11.13□□□□□ -0.63
NEDD4-206ENST00000507063 PYGBP11216 843 aa11.13□□□□□ -0.63
NEDD4-206ENST00000507063 KLHL34Q8N239 644 aa11.13□□□□□ -0.63
NEDD4-206ENST00000507063 OCEL1Q9H607 264 aa11.13□□□□□ -0.63
NEDD4-206ENST00000507063 EPRSP07814 1512 aaKnown RBP11.13□□□□□ -0.63
NEDD4-206ENST00000507063 ZCCHC11Q5TAX3 1644 aaKnown RBP11.13□□□□□ -0.63
NEDD4-206ENST00000507063 GSE1Q14687 1217 aa11.12□□□□□ -0.63
NEDD4-206ENST00000507063 IRX5P78411 483 aaPredicted RBP11.11□□□□□ -0.63
NEDD4-206ENST00000507063 ARID3CA6NKF2 412 aa11.1□□□□□ -0.63
NEDD4-206ENST00000507063 P3H3Q8IVL6 736 aa11.1□□□□□ -0.63
NEDD4-206ENST00000507063 KCNH8Q96L42 1107 aa11.1□□□□□ -0.63
NEDD4-206ENST00000507063 SNPHO15079 494 aa11.09□□□□□ -0.63
NEDD4-206ENST00000507063 GOLGA2Q08379 1002 aa11.09□□□□□ -0.63
NEDD4-206ENST00000507063 ZNF467Q7Z7K2 595 aaPredicted RBP11.09□□□□□ -0.63
NEDD4-206ENST00000507063 MAP3K4Q9Y6R4 1608 aa11.09□□□□□ -0.63
NEDD4-206ENST00000507063 PRXQ9BXM0 1461 aa11.07□□□□□ -0.64
NEDD4-206ENST00000507063 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.07□□□□□ -0.64
NEDD4-206ENST00000507063 CTTNBP2Q8WZ74 1663 aa11.07□□□□□ -0.64
NEDD4-206ENST00000507063 CDAN1Q8IWY9 1227 aa11.06□□□□□ -0.64
NEDD4-206ENST00000507063 PCDHB8Q9UN66 801 aa11.06□□□□□ -0.64
NEDD4-206ENST00000507063 WDR7Q9Y4E6 1490 aa11.06□□□□□ -0.64
NEDD4-206ENST00000507063 ABCA8O94911 1581 aa11.05□□□□□ -0.64
NEDD4-206ENST00000507063 IFNLR1Q8IU57 520 aaPredicted RBP11.05□□□□□ -0.64
NEDD4-206ENST00000507063 ADGRL1O94910 1474 aa11.05□□□□□ -0.64
NEDD4-206ENST00000507063 ST18O60284 1047 aa11.03□□□□□ -0.64
NEDD4-206ENST00000507063 RANGAP1P46060 587 aaPredicted RBP11.03□□□□□ -0.64
NEDD4-206ENST00000507063 CD109Q6YHK3 1445 aa11.02□□□□□ -0.64
NEDD4-206ENST00000507063 MKRN3Q13064 507 aaKnown RBP11.02□□□□□ -0.65
NEDD4-206ENST00000507063 TMEM121BQ9BXQ6 578 aaPredicted RBP11.02□□□□□ -0.65
NEDD4-206ENST00000507063 GOLGA3Q08378 1498 aa11.01□□□□□ -0.65
NEDD4-206ENST00000507063 TEX14Q8IWB6 1497 aa11.01□□□□□ -0.65
NEDD4-206ENST00000507063 L3MBTL3Q96JM7 780 aaPredicted RBP11□□□□□ -0.65
NEDD4-206ENST00000507063 ATP10BO94823 1461 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms