RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 SLAIN1Q8ND83 568 aa9.51□□□□□ -0.89
CLDND1-213ENST00000506927 SPRYD3Q8NCJ5 442 aa9.49□□□□□ -0.89
CLDND1-213ENST00000506927 PAXIP1Q6ZW49 1069 aaPredicted RBP9.48□□□□□ -0.89
CLDND1-213ENST00000506927 TMEM92Q6UXU6 159 aa9.47□□□□□ -0.89
CLDND1-213ENST00000506927 CFAP44Q96MT7 982 aa9.47□□□□□ -0.89
CLDND1-213ENST00000506927 HRCP23327 699 aa9.44□□□□□ -0.9
CLDND1-213ENST00000506927 FAM163AQ96GL9 167 aaPredicted RBP9.4□□□□□ -0.9
CLDND1-213ENST00000506927 C2orf72A6NCS6 295 aa9.39□□□□□ -0.91
CLDND1-213ENST00000506927 KIF3CO14782 793 aa9.39□□□□□ -0.91
CLDND1-213ENST00000506927 TMC2Q8TDI7 906 aa9.38□□□□□ -0.91
CLDND1-213ENST00000506927 MYO15BQ96JP2 1530 aa9.36□□□□□ -0.91
CLDND1-213ENST00000506927 CADPS2Q86UW7 1296 aa9.36□□□□□ -0.91
CLDND1-213ENST00000506927 GPHNQ9NQX3 736 aaPredicted RBP9.35□□□□□ -0.91
CLDND1-213ENST00000506927 POTEMA6NI47 508 aa9.34□□□□□ -0.91
CLDND1-213ENST00000506927 SNPHO15079 494 aa9.34□□□□□ -0.91
CLDND1-213ENST00000506927 CRISPLD2Q9H0B8 497 aa9.34□□□□□ -0.91
CLDND1-213ENST00000506927 NCKAP5LQ9HCH0 1330 aa9.33□□□□□ -0.92
CLDND1-213ENST00000506927 ZEB1P37275 1124 aaPredicted RBP9.33□□□□□ -0.92
CLDND1-213ENST00000506927 PLCB2Q00722 1185 aa9.33□□□□□ -0.92
CLDND1-213ENST00000506927 PDE4AP27815 886 aa9.32□□□□□ -0.92
CLDND1-213ENST00000506927 HOXB3P14651 431 aaPredicted RBP9.31□□□□□ -0.92
CLDND1-213ENST00000506927 POTEGQ6S5H5 508 aa9.31□□□□□ -0.92
CLDND1-213ENST00000506927 FOXK1P85037 733 aa9.3□□□□□ -0.92
CLDND1-213ENST00000506927 DSG2Q14126 1118 aa9.3□□□□□ -0.92
CLDND1-213ENST00000506927 LARP6Q9BRS8 491 aaKnown RBP9.29□□□□□ -0.92
CLDND1-213ENST00000506927 TSHZ2Q9NRE2 1034 aa9.29□□□□□ -0.92
CLDND1-213ENST00000506927 ST18O60284 1047 aa9.28□□□□□ -0.92
CLDND1-213ENST00000506927 DOK7Q18PE1 504 aa9.28□□□□□ -0.92
CLDND1-213ENST00000506927 LCE2DQ5TA82 110 aaPredicted RBP9.28□□□□□ -0.92
CLDND1-213ENST00000506927 PLPP6Q8IY26 295 aa9.28□□□□□ -0.92
CLDND1-213ENST00000506927 TRIM26Q12899 539 aaPredicted RBP9.26□□□□□ -0.93
CLDND1-213ENST00000506927 PPP1R15BQ5SWA1 713 aa9.26□□□□□ -0.93
CLDND1-213ENST00000506927 ZNF710Q8N1W2 664 aa9.25□□□□□ -0.93
CLDND1-213ENST00000506927 DDX27Q96GQ7 796 aaKnown RBP9.25□□□□□ -0.93
CLDND1-213ENST00000506927 PCGF6Q9BYE7 350 aa9.25□□□□□ -0.93
CLDND1-213ENST00000506927 MFSD10Q14728 455 aa9.24□□□□□ -0.93
CLDND1-213ENST00000506927 PCDH10Q9P2E7 1040 aa9.24□□□□□ -0.93
CLDND1-213ENST00000506927 ABCC9O60706 1549 aa9.23□□□□□ -0.93
CLDND1-213ENST00000506927 RIMBP2O15034 1052 aa9.23□□□□□ -0.93
CLDND1-213ENST00000506927 SLC34A2O95436 690 aa9.21□□□□□ -0.94
CLDND1-213ENST00000506927 GPR153Q6NV75 609 aa9.2□□□□□ -0.94
CLDND1-213ENST00000506927 ZSWIM6Q9HCJ5 1215 aa9.2□□□□□ -0.94
CLDND1-213ENST00000506927 HOXB1P14653 301 aaPredicted RBP9.19□□□□□ -0.94
CLDND1-213ENST00000506927 HAP1P54257 671 aaPredicted RBP9.19□□□□□ -0.94
CLDND1-213ENST00000506927 ARSIQ5FYB1 569 aa9.19□□□□□ -0.94
CLDND1-213ENST00000506927 PTCD2Q8WV60 388 aaKnown RBP9.18□□□□□ -0.94
CLDND1-213ENST00000506927 MARVELD3Q96A59 401 aa9.18□□□□□ -0.94
CLDND1-213ENST00000506927 PCDHGA4Q9Y5G9 962 aa9.18□□□□□ -0.94
CLDND1-213ENST00000506927 KHSRPQ92945 711 aaKnown RBP eCLIP9.17□□□□□ -0.946e-9■■■□□ 15.2
CLDND1-213ENST00000506927 UPF1Q92900 1129 aaKnown RBP eCLIP9.16□□□□□ -0.94
CLDND1-213ENST00000506927 WDR70Q9NW82 654 aa9.16□□□□□ -0.94
CLDND1-213ENST00000506927 PLSCR2Q9NRY7 297 aa9.15□□□□□ -0.94
CLDND1-213ENST00000506927 EMP3P54852 163 aa9.14□□□□□ -0.95
CLDND1-213ENST00000506927 OXER1Q8TDS5 423 aa9.14□□□□□ -0.95
CLDND1-213ENST00000506927 EMILIN3Q9NT22 766 aa9.14□□□□□ -0.95
CLDND1-213ENST00000506927 RB1CC1Q8TDY2 1594 aa9.14□□□□□ -0.95
CLDND1-213ENST00000506927 NACADO15069 1562 aa9.13□□□□□ -0.95
CLDND1-213ENST00000506927 NUDT7P0C024 238 aa9.13□□□□□ -0.95
CLDND1-213ENST00000506927 CAMK2BQ13554 666 aa9.13□□□□□ -0.95
CLDND1-213ENST00000506927 TBC1D12O60347 775 aa9.12□□□□□ -0.95
CLDND1-213ENST00000506927 CDAN1Q8IWY9 1227 aa9.11□□□□□ -0.95
CLDND1-213ENST00000506927 FAM205CA6NFA0 338 aa9.1□□□□□ -0.95
CLDND1-213ENST00000506927 E2F4Q16254 413 aa9.1□□□□□ -0.95
CLDND1-213ENST00000506927 RSF1Q96T23 1441 aaPredicted RBP9.1□□□□□ -0.95
CLDND1-213ENST00000506927 KDM4FA0A1W2PPD8 638 aa9.09□□□□□ -0.95
CLDND1-213ENST00000506927 ERBB3P21860 1342 aa9.08□□□□□ -0.96
CLDND1-213ENST00000506927 MAP3K9P80192 1104 aa9.08□□□□□ -0.96
CLDND1-213ENST00000506927 POTEB3A0JP26 581 aa9.07□□□□□ -0.96
CLDND1-213ENST00000506927 POTEBQ6S5H4 581 aa9.07□□□□□ -0.96
CLDND1-213ENST00000506927 LHX6Q9UPM6 363 aa9.07□□□□□ -0.96
CLDND1-213ENST00000506927 KDM2AQ9Y2K7 1162 aa9.07□□□□□ -0.96
CLDND1-213ENST00000506927 ZNF316A6NFI3 1004 aaPredicted RBP9.06□□□□□ -0.96
CLDND1-213ENST00000506927 DPYSL4O14531 572 aa9.06□□□□□ -0.96
CLDND1-213ENST00000506927 HS3ST6Q96QI5 342 aa9.06□□□□□ -0.96
CLDND1-213ENST00000506927 VARS2Q5ST30 1063 aaKnown RBP9.05□□□□□ -0.96
CLDND1-213ENST00000506927 LOC105371045A0A1W2PR82 267 aa9.04□□□□□ -0.96
CLDND1-213ENST00000506927 EVI5O60447 810 aa9.04□□□□□ -0.96
CLDND1-213ENST00000506927 SCRIBQ14160 1630 aa9.03□□□□□ -0.96
CLDND1-213ENST00000506927 VSIG10Q8N0Z9 540 aa9.03□□□□□ -0.96
CLDND1-213ENST00000506927 ANO8Q9HCE9 1232 aaPredicted RBP9.02□□□□□ -0.97
CLDND1-213ENST00000506927 KCNV2Q8TDN2 545 aa9.01□□□□□ -0.97
CLDND1-213ENST00000506927 ARIH1Q9Y4X5 557 aaPredicted RBP9.01□□□□□ -0.97
CLDND1-213ENST00000506927 PSDA5PKW4 1024 aaPredicted RBP8.97□□□□□ -0.97
CLDND1-213ENST00000506927 PDIA6Q15084 440 aa8.97□□□□□ -0.97
CLDND1-213ENST00000506927 ZNF687Q8N1G0 1237 aa8.97□□□□□ -0.97
CLDND1-213ENST00000506927 ARHGEF1Q92888 912 aaKnown RBP8.97□□□□□ -0.97
CLDND1-213ENST00000506927 SPDYE16A6NNV3 312 aaPredicted RBP8.96□□□□□ -0.98
CLDND1-213ENST00000506927 P3H3Q8IVL6 736 aa8.96□□□□□ -0.98
CLDND1-213ENST00000506927 ZNF454Q8N9F8 522 aa8.96□□□□□ -0.98
CLDND1-213ENST00000506927 FOSBP53539 338 aa8.94□□□□□ -0.98
CLDND1-213ENST00000506927 PPP4R3BQ5MIZ7 849 aa8.94□□□□□ -0.98
CLDND1-213ENST00000506927 JPH4Q96JJ6 628 aa8.94□□□□□ -0.98
CLDND1-213ENST00000506927 PTGER2P43116 358 aa8.93□□□□□ -0.98
CLDND1-213ENST00000506927 DDX12PQ92771 950 aa8.93□□□□□ -0.98
CLDND1-213ENST00000506927 BAZ1AQ9NRL2 1556 aaPredicted RBP8.93□□□□□ -0.98
CLDND1-213ENST00000506927 KRTAP3-3Q9BYR6 98 aa8.92□□□□□ -0.98
CLDND1-213ENST00000506927 KRTAP3-2Q9BYR7 98 aa8.92□□□□□ -0.98
CLDND1-213ENST00000506927 PCDHGA10Q9Y5H3 936 aa8.92□□□□□ -0.98
CLDND1-213ENST00000506927 POTEEQ6S8J3 1075 aa8.91□□□□□ -0.98
CLDND1-213ENST00000506927 AXIN2Q9Y2T1 843 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms