RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 CDC42BPBQ9Y5S2 1711 aa31.4■■■□□ 2.62
SNX25-204ENST00000506896 MTUS2Q5JR59 1369 aa31.4■■■□□ 2.62
SNX25-204ENST00000506896 ARHGAP5Q13017 1502 aa31.35■■■□□ 2.61
SNX25-204ENST00000506896 ZMYM4Q5VZL5 1548 aa31.35■■■□□ 2.61
SNX25-204ENST00000506896 TIAM1Q13009 1591 aa31.34■■■□□ 2.61
SNX25-204ENST00000506896 EHBP1L1Q8N3D4 1523 aa31.34■■■□□ 2.61
SNX25-204ENST00000506896 MAP3K1Q13233 1512 aa31.34■■■□□ 2.61
SNX25-204ENST00000506896 POGZQ7Z3K3 1410 aa31.32■■■□□ 2.61
SNX25-204ENST00000506896 PREX2Q70Z35 1606 aa31.32■■■□□ 2.6
SNX25-204ENST00000506896 CDC42BPAQ5VT25 1732 aa31.31■■■□□ 2.6
SNX25-204ENST00000506896 MAGI2Q86UL8 1455 aa31.3■■■□□ 2.6
SNX25-204ENST00000506896 ARHGEF40Q8TER5 1519 aa31.29■■■□□ 2.6
SNX25-204ENST00000506896 YEATS2Q9ULM3 1422 aa31.25■■■□□ 2.59
SNX25-204ENST00000506896 APLP2Q06481 763 aa31.25■■■□□ 2.59
SNX25-204ENST00000506896 GPATCH8Q9UKJ3 1502 aaKnown RBP31.24■■■□□ 2.59
SNX25-204ENST00000506896 ZFYVE16Q7Z3T8 1539 aa31.23■■■□□ 2.59
SNX25-204ENST00000506896 AFAP1Q8N556 730 aa31.22■■■□□ 2.59
SNX25-204ENST00000506896 ZNF518AQ6AHZ1 1483 aa31.21■■■□□ 2.59
SNX25-204ENST00000506896 LRRC9Q6ZRR7 1453 aa31.21■■■□□ 2.59
SNX25-204ENST00000506896 ADAMTSL3P82987 1691 aa31.2■■■□□ 2.59
SNX25-204ENST00000506896 ARHGEF12Q9NZN5 1544 aa31.19■■■□□ 2.58
SNX25-204ENST00000506896 CCNB3Q8WWL7 1395 aa31.19■■■□□ 2.58
SNX25-204ENST00000506896 KDM5CP41229 1560 aa31.19■■■□□ 2.58
SNX25-204ENST00000506896 BCORL1Q5H9F3 1711 aa31.18■■■□□ 2.58
SNX25-204ENST00000506896 ABCC1P33527 1531 aa31.18■■■□□ 2.58
SNX25-204ENST00000506896 SUPT6HQ7KZ85 1726 aaKnown RBP31.18■■■□□ 2.58
SNX25-204ENST00000506896 ARID4BQ4LE39 1312 aaPredicted RBP31.16■■■□□ 2.58
SNX25-204ENST00000506896 SIGLEC1Q9BZZ2 1709 aa31.15■■■□□ 2.58
SNX25-204ENST00000506896 ITSN2Q9NZM3 1697 aa31.14■■■□□ 2.58
SNX25-204ENST00000506896 TRAPPC8Q9Y2L5 1435 aa31.14■■■□□ 2.58
SNX25-204ENST00000506896 NCOA2Q15596 1464 aa31.13■■■□□ 2.57
SNX25-204ENST00000506896 ATP10AO60312 1499 aa31.12■■■□□ 2.57
SNX25-204ENST00000506896 SAMD9LQ8IVG5 1584 aa31.12■■■□□ 2.57
SNX25-204ENST00000506896 KANK4Q5T7N3 995 aaPredicted RBP31.11■■■□□ 2.57
SNX25-204ENST00000506896 CFDP1Q9UEE9 299 aaPredicted RBP31.1■■■□□ 2.57
SNX25-204ENST00000506896 ZNF777Q9ULD5 760 aaPredicted RBP31.1■■■□□ 2.57
SNX25-204ENST00000506896 MLH3Q9UHC1 1453 aa31.09■■■□□ 2.57
SNX25-204ENST00000506896 HECW2Q9P2P5 1572 aa31.08■■■□□ 2.57
SNX25-204ENST00000506896 C9orf84Q5VXU9 1444 aa31.06■■■□□ 2.56
SNX25-204ENST00000506896 KIAA1107Q9UPP5 1409 aa31.05■■■□□ 2.56
SNX25-204ENST00000506896 PTPRMP28827 1452 aa31.04■■■□□ 2.56
SNX25-204ENST00000506896 MADDQ8WXG6 1647 aa31.04■■■□□ 2.56
SNX25-204ENST00000506896 HNRNPMP52272 730 aaKnown RBP eCLIP31.03■■■□□ 2.561e-6■■■■□ 20
SNX25-204ENST00000506896 SYCP2Q9BX26 1530 aa31.02■■■□□ 2.56
SNX25-204ENST00000506896 PLEKHH2Q8IVE3 1493 aa31.01■■■□□ 2.56
SNX25-204ENST00000506896 DIP2CQ9Y2E4 1556 aa31.01■■■□□ 2.56
SNX25-204ENST00000506896 KIDINS220Q9ULH0 1771 aa31■■■□□ 2.55
SNX25-204ENST00000506896 MYT1LQ9UL68 1186 aa31■■■□□ 2.55
SNX25-204ENST00000506896 ABCA6Q8N139 1617 aa30.98■■■□□ 2.55
SNX25-204ENST00000506896 REREQ9P2R6 1566 aa30.97■■■□□ 2.55
SNX25-204ENST00000506896 ZNF644Q9H582 1327 aaPredicted RBP30.97■■■□□ 2.55
SNX25-204ENST00000506896 MLECQ14165 292 aa30.94■■■□□ 2.54
SNX25-204ENST00000506896 RIMS1Q86UR5 1692 aaKnown RBP30.93■■■□□ 2.54
SNX25-204ENST00000506896 MBD5Q9P267 1494 aa30.91■■■□□ 2.54
SNX25-204ENST00000506896 SPAG9O60271 1321 aaKnown RBP30.91■■■□□ 2.54
SNX25-204ENST00000506896 MYOM3Q5VTT5 1437 aa30.9■■■□□ 2.54
SNX25-204ENST00000506896 MIA2Q96PC5 1412 aa30.89■■■□□ 2.53
SNX25-204ENST00000506896 AGLP35573 1532 aa30.88■■■□□ 2.53
SNX25-204ENST00000506896 FER1L4A9Z1Z3 1794 aa30.87■■■□□ 2.53
SNX25-204ENST00000506896 CAMSAP2Q08AD1 1489 aa30.85■■■□□ 2.53
SNX25-204ENST00000506896 INO80Q9ULG1 1556 aaPredicted RBP30.84■■■□□ 2.53
SNX25-204ENST00000506896 ATP7AQ04656 1500 aa30.84■■■□□ 2.53
SNX25-204ENST00000506896 RSPH4AQ5TD94 716 aa30.81■■■□□ 2.52
SNX25-204ENST00000506896 RTEL1-TNFRSF6BF6WH68 1400 aa30.77■■■□□ 2.52
SNX25-204ENST00000506896 CCDC141Q6ZP82 1450 aa30.75■■■□□ 2.51
SNX25-204ENST00000506896 ARHGEF5Q12774 1597 aa30.74■■■□□ 2.51
SNX25-204ENST00000506896 FGD6Q6ZV73 1430 aa30.73■■■□□ 2.51
SNX25-204ENST00000506896 PLXNC1O60486 1568 aa30.72■■■□□ 2.51
SNX25-204ENST00000506896 A2MP01023 1474 aa30.72■■■□□ 2.51
SNX25-204ENST00000506896 PLPPR3Q6T4P5 718 aa30.7■■■□□ 2.51
SNX25-204ENST00000506896 ADGBQ8N7X0 1667 aa30.7■■■□□ 2.5
SNX25-204ENST00000506896 PTPN23Q9H3S7 1636 aa30.69■■■□□ 2.5
SNX25-204ENST00000506896 CEBPAP49715 358 aaPredicted RBP30.68■■■□□ 2.5
SNX25-204ENST00000506896 LMTK3Q96Q04 1460 aa30.67■■■□□ 2.5
SNX25-204ENST00000506896 TCOF1Q13428 1488 aaKnown RBP30.66■■■□□ 2.5
SNX25-204ENST00000506896 TSPY4P0CV99 314 aa30.65■■■□□ 2.5
SNX25-204ENST00000506896 TSPY10P0CW01 314 aa30.65■■■□□ 2.5
SNX25-204ENST00000506896 DHX29Q7Z478 1369 aaKnown RBP30.63■■■□□ 2.49
SNX25-204ENST00000506896 SETD1BQ9UPS6 1966 aaKnown RBP30.63■■■□□ 2.49
SNX25-204ENST00000506896 ESF1Q9H501 851 aaKnown RBP30.61■■■□□ 2.49
SNX25-204ENST00000506896 C3P01024 1663 aa30.6■■■□□ 2.49
SNX25-204ENST00000506896 CNTLNQ9NXG0 1405 aa30.6■■■□□ 2.49
SNX25-204ENST00000506896 PPARGC1BQ86YN6 1023 aaKnown RBP30.59■■■□□ 2.49
SNX25-204ENST00000506896 MAST1Q9Y2H9 1570 aa30.57■■■□□ 2.48
SNX25-204ENST00000506896 GGT6Q6P531 493 aa30.55■■■□□ 2.48
SNX25-204ENST00000506896 PPP6R1Q9UPN7 881 aa30.55■■■□□ 2.48
SNX25-204ENST00000506896 MROH2AA6NES4 1674 aa30.54■■■□□ 2.48
SNX25-204ENST00000506896 SHANK2Q9UPX8 1470 aa30.53■■■□□ 2.48
SNX25-204ENST00000506896 DNMT1P26358 1616 aaKnown RBP30.53■■■□□ 2.48
SNX25-204ENST00000506896 PREX1Q8TCU6 1659 aa30.52■■■□□ 2.48
SNX25-204ENST00000506896 ABCC5O15440 1437 aa30.52■■■□□ 2.48
SNX25-204ENST00000506896 DAPK1P53355 1430 aa30.52■■■□□ 2.48
SNX25-204ENST00000506896 FAM50AQ14320 339 aaKnown RBP30.51■■■□□ 2.47
SNX25-204ENST00000506896 ZMYM3Q14202 1370 aa30.51■■■□□ 2.47
SNX25-204ENST00000506896 CROCC2H7BZ55 1655 aa30.5■■■□□ 2.47
SNX25-204ENST00000506896 HSPA2P54652 639 aa30.5■■■□□ 2.47
SNX25-204ENST00000506896 CLTCQ00610 1675 aaKnown RBP30.49■■■□□ 2.47
SNX25-204ENST00000506896 KIF3BO15066 747 aa30.48■■■□□ 2.47
SNX25-204ENST00000506896 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.44■■■□□ 2.46
SNX25-204ENST00000506896 UHRF1BP1Q6BDS2 1440 aa30.42■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms