RNA–Protein interactions for RNA: ENST00000506874.1

SNX2-205, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 200 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-205ENST00000506874 MYO5CQ9NQX4 1742 aa26.66■■□□□ 1.86
SNX2-205ENST00000506874 KIF14Q15058 1648 aa26.65■■□□□ 1.86
SNX2-205ENST00000506874 MLECQ14165 292 aa26.64■■□□□ 1.86
SNX2-205ENST00000506874 EFCAB2Q5VUJ9 269 aa26.64■■□□□ 1.86
SNX2-205ENST00000506874 POGZQ7Z3K3 1410 aa26.64■■□□□ 1.85
SNX2-205ENST00000506874 SIGLEC1Q9BZZ2 1709 aa26.63■■□□□ 1.85
SNX2-205ENST00000506874 MAGI2Q86UL8 1455 aa26.62■■□□□ 1.85
SNX2-205ENST00000506874 TROQ12816 1431 aaPredicted RBP26.61■■□□□ 1.85
SNX2-205ENST00000506874 LRRIQ1Q96JM4 1722 aa26.61■■□□□ 1.85
SNX2-205ENST00000506874 PCF11O94913 1555 aaKnown RBP26.58■■□□□ 1.85
SNX2-205ENST00000506874 CLIP1P30622 1438 aa26.57■■□□□ 1.84
SNX2-205ENST00000506874 ARHGAP5Q13017 1502 aa26.56■■□□□ 1.84
SNX2-205ENST00000506874 LMTK3Q96Q04 1460 aa26.55■■□□□ 1.84
SNX2-205ENST00000506874 ATP10AO60312 1499 aa26.53■■□□□ 1.84
SNX2-205ENST00000506874 FER1L4A9Z1Z3 1794 aa26.51■■□□□ 1.83
SNX2-205ENST00000506874 AFAP1Q8N556 730 aa26.51■■□□□ 1.83
SNX2-205ENST00000506874 MYT1LQ9UL68 1186 aa26.51■■□□□ 1.83
SNX2-205ENST00000506874 HSPA2P54652 639 aa26.5■■□□□ 1.83
SNX2-205ENST00000506874 C9orf84Q5VXU9 1444 aa26.49■■□□□ 1.83
SNX2-205ENST00000506874 CASKIN1Q8WXD9 1431 aa26.48■■□□□ 1.83
SNX2-205ENST00000506874 ZNF518AQ6AHZ1 1483 aa26.48■■□□□ 1.83
SNX2-205ENST00000506874 CDC42BPBQ9Y5S2 1711 aa26.47■■□□□ 1.83
SNX2-205ENST00000506874 CCDC18Q5T9S5 1454 aa26.45■■□□□ 1.82
SNX2-205ENST00000506874 KDM5CP41229 1560 aa26.42■■□□□ 1.82
SNX2-205ENST00000506874 ARHGEF12Q9NZN5 1544 aa26.42■■□□□ 1.82
SNX2-205ENST00000506874 FBXO41Q8TF61 875 aa26.41■■□□□ 1.82
SNX2-205ENST00000506874 PREX2Q70Z35 1606 aa26.4■■□□□ 1.82
SNX2-205ENST00000506874 CEBPAP49715 358 aaPredicted RBP26.39■■□□□ 1.82
SNX2-205ENST00000506874 DIP2CQ9Y2E4 1556 aa26.37■■□□□ 1.81
SNX2-205ENST00000506874 TRAPPC8Q9Y2L5 1435 aa26.37■■□□□ 1.81
SNX2-205ENST00000506874 FYCO1Q9BQS8 1478 aa26.36■■□□□ 1.81
SNX2-205ENST00000506874 ABCC1P33527 1531 aa26.35■■□□□ 1.81
SNX2-205ENST00000506874 CDC42BPAQ5VT25 1732 aa26.34■■□□□ 1.81
SNX2-205ENST00000506874 ABCA6Q8N139 1617 aa26.34■■□□□ 1.81
SNX2-205ENST00000506874 ITSN2Q9NZM3 1697 aa26.34■■□□□ 1.81
SNX2-205ENST00000506874 ZNF777Q9ULD5 760 aaPredicted RBP26.33■■□□□ 1.81
SNX2-205ENST00000506874 MLH3Q9UHC1 1453 aa26.32■■□□□ 1.8
SNX2-205ENST00000506874 PREX1Q8TCU6 1659 aa26.28■■□□□ 1.8
SNX2-205ENST00000506874 REREQ9P2R6 1566 aa26.27■■□□□ 1.8
SNX2-205ENST00000506874 KIDINS220Q9ULH0 1771 aa26.25■■□□□ 1.79
SNX2-205ENST00000506874 ESF1Q9H501 851 aaKnown RBP26.24■■□□□ 1.79
SNX2-205ENST00000506874 SAMD9LQ8IVG5 1584 aa26.23■■□□□ 1.79
SNX2-205ENST00000506874 GPATCH8Q9UKJ3 1502 aaKnown RBP26.23■■□□□ 1.79
SNX2-205ENST00000506874 SETD1BQ9UPS6 1966 aaKnown RBP26.22■■□□□ 1.79
SNX2-205ENST00000506874 HNRNPMP52272 730 aaKnown RBP eCLIP26.22■■□□□ 1.79
SNX2-205ENST00000506874 AGLP35573 1532 aa26.21■■□□□ 1.79
SNX2-205ENST00000506874 SYCP2Q9BX26 1530 aa26.21■■□□□ 1.79
SNX2-205ENST00000506874 UHRF1BP1Q6BDS2 1440 aa26.19■■□□□ 1.78
SNX2-205ENST00000506874 C3P01024 1663 aa26.19■■□□□ 1.78
SNX2-205ENST00000506874 CFDP1Q9UEE9 299 aaPredicted RBP26.18■■□□□ 1.78
SNX2-205ENST00000506874 SPAG9O60271 1321 aaKnown RBP26.17■■□□□ 1.78
SNX2-205ENST00000506874 MTUS2Q5JR59 1369 aa26.17■■□□□ 1.78
SNX2-205ENST00000506874 CCNB3Q8WWL7 1395 aa26.17■■□□□ 1.78
SNX2-205ENST00000506874 CERKQ8TCT0 537 aa26.15■■□□□ 1.78
SNX2-205ENST00000506874 STRCQ7RTU9 1775 aa26.12■■□□□ 1.77
SNX2-205ENST00000506874 SUPT6HQ7KZ85 1726 aaKnown RBP26.11■■□□□ 1.77
SNX2-205ENST00000506874 PLEKHH2Q8IVE3 1493 aa26.1■■□□□ 1.77
SNX2-205ENST00000506874 ATP7AQ04656 1500 aa26.09■■□□□ 1.77
SNX2-205ENST00000506874 CNTLNQ9NXG0 1405 aa26.09■■□□□ 1.77
SNX2-205ENST00000506874 KIAA1107Q9UPP5 1409 aa26.09■■□□□ 1.77
SNX2-205ENST00000506874 DMRT2Q9Y5R5 561 aa26.08■■□□□ 1.77
SNX2-205ENST00000506874 ZNF644Q9H582 1327 aaPredicted RBP26.06■■□□□ 1.76
SNX2-205ENST00000506874 CEP162Q5TB80 1403 aa26.05■■□□□ 1.76
SNX2-205ENST00000506874 INO80Q9ULG1 1556 aaPredicted RBP26.04■■□□□ 1.76
SNX2-205ENST00000506874 TIAM1Q13009 1591 aa26.03■■□□□ 1.76
SNX2-205ENST00000506874 A2MP01023 1474 aa26.03■■□□□ 1.76
SNX2-205ENST00000506874 EHBP1L1Q8N3D4 1523 aa26.03■■□□□ 1.76
SNX2-205ENST00000506874 ZMYM3Q14202 1370 aa26.01■■□□□ 1.75
SNX2-205ENST00000506874 MROH2AA6NES4 1674 aa26■■□□□ 1.75
SNX2-205ENST00000506874 GGT6Q6P531 493 aa26■■□□□ 1.75
SNX2-205ENST00000506874 CLTCQ00610 1675 aaKnown RBP25.99■■□□□ 1.75
SNX2-205ENST00000506874 PLXNC1O60486 1568 aa25.99■■□□□ 1.75
SNX2-205ENST00000506874 PTPRTO14522 1441 aa25.96■■□□□ 1.75
SNX2-205ENST00000506874 NPATQ14207 1427 aa25.95■■□□□ 1.74
SNX2-205ENST00000506874 ADGBQ8N7X0 1667 aa25.94■■□□□ 1.74
SNX2-205ENST00000506874 MBD5Q9P267 1494 aa25.94■■□□□ 1.74
SNX2-205ENST00000506874 NCOA1Q15788 1441 aa25.93■■□□□ 1.74
SNX2-205ENST00000506874 CAMSAP1Q5T5Y3 1602 aa25.91■■□□□ 1.74
SNX2-205ENST00000506874 NCOA2Q15596 1464 aa25.89■■□□□ 1.73
SNX2-205ENST00000506874 RTEL1-TNFRSF6BF6WH68 1400 aa25.87■■□□□ 1.73
SNX2-205ENST00000506874 PTPRKQ15262 1439 aa25.87■■□□□ 1.73
SNX2-205ENST00000506874 LOC105371045A0A1W2PR82 267 aa25.86■■□□□ 1.73
SNX2-205ENST00000506874 NCKAP5LQ9HCH0 1330 aa25.86■■□□□ 1.73
SNX2-205ENST00000506874 CAMSAP2Q08AD1 1489 aa25.85■■□□□ 1.73
SNX2-205ENST00000506874 MYO3AQ8NEV4 1616 aa25.85■■□□□ 1.73
SNX2-205ENST00000506874 DHX29Q7Z478 1369 aaKnown RBP25.84■■□□□ 1.73
SNX2-205ENST00000506874 PPP6R1Q9UPN7 881 aa25.84■■□□□ 1.73
SNX2-205ENST00000506874 CCDC141Q6ZP82 1450 aa25.83■■□□□ 1.73
SNX2-205ENST00000506874 KIF3BO15066 747 aa25.82■■□□□ 1.72
SNX2-205ENST00000506874 LTBP4Q8N2S1 1624 aa25.81■■□□□ 1.72
SNX2-205ENST00000506874 CEP170BQ9Y4F5 1589 aaPredicted RBP25.81■■□□□ 1.72
SNX2-205ENST00000506874 ZNF142P52746 1687 aaPredicted RBP25.8■■□□□ 1.72
SNX2-205ENST00000506874 RSPH4AQ5TD94 716 aa25.77■■□□□ 1.72
SNX2-205ENST00000506874 VPS8Q8N3P4 1428 aa25.76■■□□□ 1.71
SNX2-205ENST00000506874 PKD2Q13563 968 aa25.75■■□□□ 1.71
SNX2-205ENST00000506874 PLA2R1Q13018 1463 aa25.73■■□□□ 1.71
SNX2-205ENST00000506874 LRRC9Q6ZRR7 1453 aa25.73■■□□□ 1.71
SNX2-205ENST00000506874 ZNF335Q9H4Z2 1342 aaPredicted RBP25.73■■□□□ 1.71
SNX2-205ENST00000506874 TSPY4P0CV99 314 aa25.73■■□□□ 1.71
SNX2-205ENST00000506874 TSPY10P0CW01 314 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms