RNA–Protein interactions for RNA: ENST00000506862.1

LINC01411-202, Transcript of long intergenic non-protein coding RNA 1411, humanhuman

TSL 3 BASIC

Gene LINC01411, Length 744 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01411-202ENST00000506862 ZEB1P37275 1124 aaPredicted RBP13.41□□□□□ -0.26
LINC01411-202ENST00000506862 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.4□□□□□ -0.26
LINC01411-202ENST00000506862 ITSN2Q9NZM3 1697 aa13.39□□□□□ -0.27
LINC01411-202ENST00000506862 FGD6Q6ZV73 1430 aa13.39□□□□□ -0.27
LINC01411-202ENST00000506862 NPM3O75607 178 aaKnown RBP13.38□□□□□ -0.27
LINC01411-202ENST00000506862 MIA2Q96PC5 1412 aa13.38□□□□□ -0.27
LINC01411-202ENST00000506862 CFDP1Q9UEE9 299 aaPredicted RBP13.37□□□□□ -0.27
LINC01411-202ENST00000506862 WDR7Q9Y4E6 1490 aa13.36□□□□□ -0.27
LINC01411-202ENST00000506862 DCAF8L1A6NGE4 600 aa13.36□□□□□ -0.27
LINC01411-202ENST00000506862 KCNA4P22459 653 aa13.36□□□□□ -0.27
LINC01411-202ENST00000506862 ASXL2Q76L83 1435 aa13.36□□□□□ -0.27
LINC01411-202ENST00000506862 PTPN23Q9H3S7 1636 aa13.35□□□□□ -0.27
LINC01411-202ENST00000506862 ITGAEP38570 1179 aa13.35□□□□□ -0.27
LINC01411-202ENST00000506862 CCER1Q8TC90 406 aaPredicted RBP13.35□□□□□ -0.27
LINC01411-202ENST00000506862 ZNF777Q9ULD5 760 aaPredicted RBP13.34□□□□□ -0.27
LINC01411-202ENST00000506862 ABCC10Q5T3U5 1492 aa13.34□□□□□ -0.27
LINC01411-202ENST00000506862 GPATCH8Q9UKJ3 1502 aaKnown RBP13.34□□□□□ -0.27
LINC01411-202ENST00000506862 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.32□□□□□ -0.28
LINC01411-202ENST00000506862 CDC42BPAQ5VT25 1732 aa13.3□□□□□ -0.28
LINC01411-202ENST00000506862 TCOF1Q13428 1488 aaKnown RBP13.29□□□□□ -0.28
LINC01411-202ENST00000506862 EFCAB2Q5VUJ9 269 aa13.29□□□□□ -0.28
LINC01411-202ENST00000506862 MYO5CQ9NQX4 1742 aa13.29□□□□□ -0.28
LINC01411-202ENST00000506862 MAPKBP1O60336 1514 aa13.29□□□□□ -0.28
LINC01411-202ENST00000506862 PLCH2O75038 1416 aa13.28□□□□□ -0.28
LINC01411-202ENST00000506862 TTC37Q6PGP7 1564 aa13.28□□□□□ -0.28
LINC01411-202ENST00000506862 ARHGAP5Q13017 1502 aa13.27□□□□□ -0.29
LINC01411-202ENST00000506862 PREX2Q70Z35 1606 aa13.27□□□□□ -0.29
LINC01411-202ENST00000506862 ZNF644Q9H582 1327 aaPredicted RBP13.26□□□□□ -0.29
LINC01411-202ENST00000506862 CDC42BPBQ9Y5S2 1711 aa13.26□□□□□ -0.29
LINC01411-202ENST00000506862 ABCA9Q8IUA7 1624 aa13.25□□□□□ -0.29
LINC01411-202ENST00000506862 CAMSAP2Q08AD1 1489 aa13.25□□□□□ -0.29
LINC01411-202ENST00000506862 RSPH4AQ5TD94 716 aa13.25□□□□□ -0.29
LINC01411-202ENST00000506862 SETD5Q9C0A6 1442 aa13.24□□□□□ -0.29
LINC01411-202ENST00000506862 TSPY4P0CV99 314 aa13.23□□□□□ -0.29
LINC01411-202ENST00000506862 TSPY10P0CW01 314 aa13.23□□□□□ -0.29
LINC01411-202ENST00000506862 PLEKHH2Q8IVE3 1493 aa13.23□□□□□ -0.29
LINC01411-202ENST00000506862 CD109Q6YHK3 1445 aa13.22□□□□□ -0.29
LINC01411-202ENST00000506862 HNRNPMP52272 730 aaKnown RBP eCLIP13.22□□□□□ -0.29
LINC01411-202ENST00000506862 FAM69CQ0P6D2 419 aa13.22□□□□□ -0.29
LINC01411-202ENST00000506862 ARAP3Q8WWN8 1544 aa13.22□□□□□ -0.29
LINC01411-202ENST00000506862 DNMT1P26358 1616 aaKnown RBP13.21□□□□□ -0.29
LINC01411-202ENST00000506862 CHIC2Q9UKJ5 165 aa13.21□□□□□ -0.29
LINC01411-202ENST00000506862 DAPK1P53355 1430 aa13.21□□□□□ -0.3
LINC01411-202ENST00000506862 ACIN1Q9UKV3 1341 aaKnown RBP13.2□□□□□ -0.3
LINC01411-202ENST00000506862 GCC2Q8IWJ2 1684 aa13.2□□□□□ -0.3
LINC01411-202ENST00000506862 GLI2P10070 1586 aa13.2□□□□□ -0.3
LINC01411-202ENST00000506862 SAMD9LQ8IVG5 1584 aa13.2□□□□□ -0.3
LINC01411-202ENST00000506862 CLSPNQ9HAW4 1339 aa13.19□□□□□ -0.3
LINC01411-202ENST00000506862 ADGBQ8N7X0 1667 aa13.19□□□□□ -0.3
LINC01411-202ENST00000506862 ABCC5O15440 1437 aa13.19□□□□□ -0.3
LINC01411-202ENST00000506862 KIAA1107Q9UPP5 1409 aa13.19□□□□□ -0.3
LINC01411-202ENST00000506862 RAB3GAP2Q9H2M9 1393 aa13.19□□□□□ -0.3
LINC01411-202ENST00000506862 FANCAO15360 1455 aa13.18□□□□□ -0.3
LINC01411-202ENST00000506862 AKNAQ7Z591 1439 aa13.18□□□□□ -0.3
LINC01411-202ENST00000506862 CROCC2H7BZ55 1655 aa13.18□□□□□ -0.3
LINC01411-202ENST00000506862 CFAP74Q9C0B2 1584 aa13.17□□□□□ -0.3
LINC01411-202ENST00000506862 HFM1A2PYH4 1435 aa13.17□□□□□ -0.3
LINC01411-202ENST00000506862 PTPRKQ15262 1439 aa13.17□□□□□ -0.3
LINC01411-202ENST00000506862 ARHGEF5Q12774 1597 aa13.16□□□□□ -0.3
LINC01411-202ENST00000506862 RRP7BPQ9NSQ0 103 aa13.16□□□□□ -0.3
LINC01411-202ENST00000506862 CCDC141Q6ZP82 1450 aa13.16□□□□□ -0.3
LINC01411-202ENST00000506862 DIP2BQ9P265 1576 aa13.15□□□□□ -0.3
LINC01411-202ENST00000506862 ROCK1Q13464 1354 aa13.15□□□□□ -0.3
LINC01411-202ENST00000506862 MBD5Q9P267 1494 aa13.15□□□□□ -0.3
LINC01411-202ENST00000506862 SYCP2Q9BX26 1530 aa13.14□□□□□ -0.31
LINC01411-202ENST00000506862 MAP3K4Q9Y6R4 1608 aa13.14□□□□□ -0.31
LINC01411-202ENST00000506862 ANKRD30AQ9BXX3 1397 aa13.14□□□□□ -0.31
LINC01411-202ENST00000506862 ABCC1P33527 1531 aa13.13□□□□□ -0.31
LINC01411-202ENST00000506862 ADGRL1O94910 1474 aa13.13□□□□□ -0.31
LINC01411-202ENST00000506862 MYT1LQ9UL68 1186 aa13.13□□□□□ -0.31
LINC01411-202ENST00000506862 SCAPERQ9BY12 1400 aa13.13□□□□□ -0.31
LINC01411-202ENST00000506862 NEO1Q92859 1461 aa13.12□□□□□ -0.31
LINC01411-202ENST00000506862 SHANK2Q9UPX8 1470 aa13.12□□□□□ -0.31
LINC01411-202ENST00000506862 DHX57Q6P158 1386 aaKnown RBP13.12□□□□□ -0.31
LINC01411-202ENST00000506862 NAIPQ13075 1403 aa13.12□□□□□ -0.31
LINC01411-202ENST00000506862 C9orf84Q5VXU9 1444 aa13.12□□□□□ -0.31
LINC01411-202ENST00000506862 TEX14Q8IWB6 1497 aa13.1□□□□□ -0.31
LINC01411-202ENST00000506862 TRHP20396 242 aaPredicted RBP13.1□□□□□ -0.31
LINC01411-202ENST00000506862 NCOA1Q15788 1441 aa13.1□□□□□ -0.31
LINC01411-202ENST00000506862 TSPOAP1O95153 1857 aa13.1□□□□□ -0.31
LINC01411-202ENST00000506862 SPAG9O60271 1321 aaKnown RBP13.1□□□□□ -0.31
LINC01411-202ENST00000506862 ADGRL2O95490 1459 aa13.1□□□□□ -0.31
LINC01411-202ENST00000506862 ARHGEF12Q9NZN5 1544 aa13.09□□□□□ -0.31
LINC01411-202ENST00000506862 AFAP1Q8N556 730 aa13.09□□□□□ -0.31
LINC01411-202ENST00000506862 TRAPPC8Q9Y2L5 1435 aa13.09□□□□□ -0.31
LINC01411-202ENST00000506862 MAST1Q9Y2H9 1570 aa13.08□□□□□ -0.32
LINC01411-202ENST00000506862 KIF13AQ9H1H9 1805 aa13.08□□□□□ -0.32
LINC01411-202ENST00000506862 TRIM52Q96A61 297 aa13.07□□□□□ -0.32
LINC01411-202ENST00000506862 RTEL1-TNFRSF6BF6WH68 1400 aa13.06□□□□□ -0.32
LINC01411-202ENST00000506862 DENND4BO75064 1496 aaPredicted RBP13.06□□□□□ -0.32
LINC01411-202ENST00000506862 ZNF518AQ6AHZ1 1483 aa13.05□□□□□ -0.32
LINC01411-202ENST00000506862 KIF15Q9NS87 1388 aa13.05□□□□□ -0.32
LINC01411-202ENST00000506862 ANKRD50Q9ULJ7 1429 aa13.03□□□□□ -0.32
LINC01411-202ENST00000506862 POGZQ7Z3K3 1410 aa13.02□□□□□ -0.33
LINC01411-202ENST00000506862 RAPGEF3O95398 923 aa13.01□□□□□ -0.33
LINC01411-202ENST00000506862 PLXNC1O60486 1568 aa13.01□□□□□ -0.33
LINC01411-202ENST00000506862 PPRC1Q5VV67 1664 aaKnown RBP13.01□□□□□ -0.33
LINC01411-202ENST00000506862 ATP7AQ04656 1500 aa13□□□□□ -0.33
LINC01411-202ENST00000506862 DUOX2Q9NRD8 1548 aa13□□□□□ -0.33
LINC01411-202ENST00000506862 MLH3Q9UHC1 1453 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms