RNA–Protein interactions for RNA: ENST00000506714.5

HERC6-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 2

Gene HERC6, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-206ENST00000506714 HSPA5P11021 654 aaKnown RBP20.84■□□□□ 0.93
HERC6-206ENST00000506714 EIF4G2P78344 907 aaKnown RBP eCLIP20.84■□□□□ 0.93
HERC6-206ENST00000506714 WASHC2AQ641Q2 1341 aa20.84■□□□□ 0.93
HERC6-206ENST00000506714 ERICH6BQ5W0A0 696 aa20.84■□□□□ 0.93
HERC6-206ENST00000506714 DENND4BO75064 1496 aaPredicted RBP20.83■□□□□ 0.92
HERC6-206ENST00000506714 RRP7BPQ9NSQ0 103 aa20.83■□□□□ 0.92
HERC6-206ENST00000506714 CARMIL2Q6F5E8 1435 aa20.81■□□□□ 0.92
HERC6-206ENST00000506714 CNTLNQ9NXG0 1405 aa20.81■□□□□ 0.92
HERC6-206ENST00000506714 JPH4Q96JJ6 628 aa20.8■□□□□ 0.92
HERC6-206ENST00000506714 EPRSP07814 1512 aaKnown RBP20.79■□□□□ 0.92
HERC6-206ENST00000506714 KDM6BO15054 1643 aa20.77■□□□□ 0.92
HERC6-206ENST00000506714 MPHOSPH9Q99550 1183 aa20.77■□□□□ 0.92
HERC6-206ENST00000506714 CHIC2Q9UKJ5 165 aa20.77■□□□□ 0.92
HERC6-206ENST00000506714 RAPGEF6Q8TEU7 1601 aa20.76■□□□□ 0.91
HERC6-206ENST00000506714 POLR1AO95602 1720 aaPredicted RBP20.76■□□□□ 0.91
HERC6-206ENST00000506714 CDK11AQ9UQ88 783 aaPredicted RBP20.74■□□□□ 0.91
HERC6-206ENST00000506714 NCOA1Q15788 1441 aa20.74■□□□□ 0.91
HERC6-206ENST00000506714 ROCK1Q13464 1354 aa20.72■□□□□ 0.91
HERC6-206ENST00000506714 CDK13Q14004 1512 aaKnown RBP20.72■□□□□ 0.91
HERC6-206ENST00000506714 L3MBTL2Q969R5 705 aa20.71■□□□□ 0.91
HERC6-206ENST00000506714 CCDC7Q96M83 1385 aa20.71■□□□□ 0.91
HERC6-206ENST00000506714 FANCIQ9NVI1 1328 aa20.7■□□□□ 0.9
HERC6-206ENST00000506714 RPRD2Q5VT52 1461 aaKnown RBP20.7■□□□□ 0.9
HERC6-206ENST00000506714 PRG4Q92954 1404 aaPredicted RBP20.69■□□□□ 0.9
HERC6-206ENST00000506714 SHROOM2Q13796 1616 aa20.68■□□□□ 0.9
HERC6-206ENST00000506714 NUP153P49790 1475 aaKnown RBP20.68■□□□□ 0.9
HERC6-206ENST00000506714 PRKRIP1Q9H875 184 aaPredicted RBP20.68■□□□□ 0.9
HERC6-206ENST00000506714 ARID3CA6NKF2 412 aa20.67■□□□□ 0.9
HERC6-206ENST00000506714 ANKRD30BQ9BXX2 1392 aa20.67■□□□□ 0.9
HERC6-206ENST00000506714 DNMT1P26358 1616 aaKnown RBP20.67■□□□□ 0.9
HERC6-206ENST00000506714 PPP4R2Q9NY27 417 aa20.67■□□□□ 0.9
HERC6-206ENST00000506714 PLB1Q6P1J6 1458 aa20.67■□□□□ 0.9
HERC6-206ENST00000506714 DAPK1P53355 1430 aa20.66■□□□□ 0.9
HERC6-206ENST00000506714 ZBED9Q6R2W3 1325 aa20.64■□□□□ 0.89
HERC6-206ENST00000506714 TEX14Q8IWB6 1497 aa20.64■□□□□ 0.89
HERC6-206ENST00000506714 CLASP1Q7Z460 1538 aa20.62■□□□□ 0.89
HERC6-206ENST00000506714 C11orf95C9JLR9 678 aaPredicted RBP20.61■□□□□ 0.89
HERC6-206ENST00000506714 SPATA31E1Q6ZUB1 1445 aa20.61■□□□□ 0.89
HERC6-206ENST00000506714 IRX6P78412 446 aaPredicted RBP20.61■□□□□ 0.89
HERC6-206ENST00000506714 MRS2Q9HD23 443 aa20.61■□□□□ 0.89
HERC6-206ENST00000506714 ABCA8O94911 1581 aa20.6■□□□□ 0.89
HERC6-206ENST00000506714 CCDC184Q52MB2 194 aa20.6■□□□□ 0.89
HERC6-206ENST00000506714 ABCC5O15440 1437 aa20.59■□□□□ 0.89
HERC6-206ENST00000506714 NBPF8Q3BBV2 869 aa20.58■□□□□ 0.88
HERC6-206ENST00000506714 MSH5O43196 834 aa20.57■□□□□ 0.88
HERC6-206ENST00000506714 FOXD1Q16676 465 aa20.57■□□□□ 0.88
HERC6-206ENST00000506714 FAM9BQ8IZU0 186 aa20.57■□□□□ 0.88
HERC6-206ENST00000506714 PTPRGP23470 1445 aa20.56■□□□□ 0.88
HERC6-206ENST00000506714 KIF7Q2M1P5 1343 aa20.55■□□□□ 0.88
HERC6-206ENST00000506714 ERCC6L2Q5T890 1561 aa20.55■□□□□ 0.88
HERC6-206ENST00000506714 SLC4A1APQ9BWU0 796 aaKnown RBP20.55■□□□□ 0.88
HERC6-206ENST00000506714 ADGBQ8N7X0 1667 aa20.53■□□□□ 0.88
HERC6-206ENST00000506714 ITSN2Q9NZM3 1697 aa20.51■□□□□ 0.87
HERC6-206ENST00000506714 ERICH6Q7L0X2 663 aa20.51■□□□□ 0.87
HERC6-206ENST00000506714 TROQ12816 1431 aaPredicted RBP20.48■□□□□ 0.87
HERC6-206ENST00000506714 PZPP20742 1482 aa20.48■□□□□ 0.87
HERC6-206ENST00000506714 ARID4BQ4LE39 1312 aaPredicted RBP20.48■□□□□ 0.87
HERC6-206ENST00000506714 MBD5Q9P267 1494 aa20.47■□□□□ 0.87
HERC6-206ENST00000506714 BCL11AQ9H165 835 aa20.46■□□□□ 0.87
HERC6-206ENST00000506714 ADCY10Q96PN6 1610 aa20.46■□□□□ 0.87
HERC6-206ENST00000506714 SMG6Q86US8 1419 aaKnown RBP20.45■□□□□ 0.86
HERC6-206ENST00000506714 ATP10BO94823 1461 aa20.45■□□□□ 0.86
HERC6-206ENST00000506714 KIF14Q15058 1648 aa20.45■□□□□ 0.86
HERC6-206ENST00000506714 ZNF644Q9H582 1327 aaPredicted RBP20.44■□□□□ 0.86
HERC6-206ENST00000506714 CROCC2H7BZ55 1655 aa20.44■□□□□ 0.86
HERC6-206ENST00000506714 ADGRL2O95490 1459 aa20.43■□□□□ 0.86
HERC6-206ENST00000506714 CAMSAP2Q08AD1 1489 aa20.43■□□□□ 0.86
HERC6-206ENST00000506714 KIAA1107Q9UPP5 1409 aa20.43■□□□□ 0.86
HERC6-206ENST00000506714 DHX29Q7Z478 1369 aaKnown RBP20.42■□□□□ 0.86
HERC6-206ENST00000506714 B4GALNT3Q6L9W6 998 aa20.42■□□□□ 0.86
HERC6-206ENST00000506714 MYT1LQ9UL68 1186 aa20.42■□□□□ 0.86
HERC6-206ENST00000506714 BCORL1Q5H9F3 1711 aa20.41■□□□□ 0.86
HERC6-206ENST00000506714 ABCC2Q92887 1545 aa20.41■□□□□ 0.86
HERC6-206ENST00000506714 KDM5CP41229 1560 aa20.4■□□□□ 0.86
HERC6-206ENST00000506714 USP47Q96K76 1375 aa20.4■□□□□ 0.86
HERC6-206ENST00000506714 PLEKHD1A6NEE1 506 aa20.39■□□□□ 0.85
HERC6-206ENST00000506714 ROCK2O75116 1388 aaKnown RBP20.39■□□□□ 0.85
HERC6-206ENST00000506714 CFDP1Q9UEE9 299 aaPredicted RBP20.38■□□□□ 0.85
HERC6-206ENST00000506714 NUDCQ9Y266 331 aa20.37■□□□□ 0.85
HERC6-206ENST00000506714 GPATCH8Q9UKJ3 1502 aaKnown RBP20.36■□□□□ 0.85
HERC6-206ENST00000506714 RNF123Q5XPI4 1314 aa20.36■□□□□ 0.85
HERC6-206ENST00000506714 ANKRD30AQ9BXX3 1397 aa20.36■□□□□ 0.85
HERC6-206ENST00000506714 UHRF1BP1Q6BDS2 1440 aa20.35■□□□□ 0.85
HERC6-206ENST00000506714 OSCARQ8IYS5 282 aa20.34■□□□□ 0.85
HERC6-206ENST00000506714 RALGAPBQ86X10 1494 aa20.32■□□□□ 0.84
HERC6-206ENST00000506714 CDC42BPAQ5VT25 1732 aa20.32■□□□□ 0.84
HERC6-206ENST00000506714 ARHGEF12Q9NZN5 1544 aa20.32■□□□□ 0.84
HERC6-206ENST00000506714 PKD2Q13563 968 aa20.32■□□□□ 0.84
HERC6-206ENST00000506714 ZCCHC11Q5TAX3 1644 aaKnown RBP20.3■□□□□ 0.84
HERC6-206ENST00000506714 ANKRD50Q9ULJ7 1429 aa20.3■□□□□ 0.84
HERC6-206ENST00000506714 UHRF1BP1LA0JNW5 1464 aa20.3■□□□□ 0.84
HERC6-206ENST00000506714 KTN1Q86UP2 1357 aaKnown RBP20.29■□□□□ 0.84
HERC6-206ENST00000506714 ABCC10Q5T3U5 1492 aa20.28■□□□□ 0.84
HERC6-206ENST00000506714 SHANK2Q9UPX8 1470 aa20.28■□□□□ 0.84
HERC6-206ENST00000506714 PNISRQ8TF01 805 aaKnown RBP20.28■□□□□ 0.84
HERC6-206ENST00000506714 KIF15Q9NS87 1388 aa20.27■□□□□ 0.84
HERC6-206ENST00000506714 ZNF326Q5BKZ1 582 aaKnown RBP20.27■□□□□ 0.83
HERC6-206ENST00000506714 KDM5DQ9BY66 1539 aa20.26■□□□□ 0.83
HERC6-206ENST00000506714 TMC1Q8TDI8 760 aa20.26■□□□□ 0.83
HERC6-206ENST00000506714 CCDC136Q96JN2 1154 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms