RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 CASKIN1Q8WXD9 1431 aa11.55□□□□□ -0.56
GYPB-206ENST00000506516 CD109Q6YHK3 1445 aa11.54□□□□□ -0.56
GYPB-206ENST00000506516 HECW1Q76N89 1606 aa11.54□□□□□ -0.56
GYPB-206ENST00000506516 TEX14Q8IWB6 1497 aa11.52□□□□□ -0.56
GYPB-206ENST00000506516 FYCO1Q9BQS8 1478 aa11.51□□□□□ -0.57
GYPB-206ENST00000506516 CDK13Q14004 1512 aaKnown RBP11.5□□□□□ -0.57
GYPB-206ENST00000506516 CCDC18Q5T9S5 1454 aa11.5□□□□□ -0.57
GYPB-206ENST00000506516 TSPOAP1O95153 1857 aa11.49□□□□□ -0.57
GYPB-206ENST00000506516 MAGI3Q5TCQ9 1506 aa11.49□□□□□ -0.57
GYPB-206ENST00000506516 MAP3K4Q9Y6R4 1608 aa11.49□□□□□ -0.57
GYPB-206ENST00000506516 CFAP43Q8NDM7 1665 aa11.47□□□□□ -0.57
GYPB-206ENST00000506516 PCF11O94913 1555 aaKnown RBP11.47□□□□□ -0.57
GYPB-206ENST00000506516 TROQ12816 1431 aaPredicted RBP11.47□□□□□ -0.57
GYPB-206ENST00000506516 PHLDB1Q86UU1 1377 aa11.47□□□□□ -0.57
GYPB-206ENST00000506516 ABCA9Q8IUA7 1624 aa11.46□□□□□ -0.58
GYPB-206ENST00000506516 ABCB7O75027 752 aa11.45□□□□□ -0.58
GYPB-206ENST00000506516 VPS8Q8N3P4 1428 aa11.44□□□□□ -0.58
GYPB-206ENST00000506516 KDM6BO15054 1643 aa11.44□□□□□ -0.58
GYPB-206ENST00000506516 EFCAB2Q5VUJ9 269 aa11.43□□□□□ -0.58
GYPB-206ENST00000506516 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.43□□□□□ -0.58
GYPB-206ENST00000506516 PPRC1Q5VV67 1664 aaKnown RBP11.43□□□□□ -0.58
GYPB-206ENST00000506516 MTUS2Q5JR59 1369 aa11.42□□□□□ -0.58
GYPB-206ENST00000506516 PLCH2O75038 1416 aa11.42□□□□□ -0.58
GYPB-206ENST00000506516 NEO1Q92859 1461 aa11.41□□□□□ -0.58
GYPB-206ENST00000506516 COL17A1Q9UMD9 1497 aaPredicted RBP11.4□□□□□ -0.58
GYPB-206ENST00000506516 KIF14Q15058 1648 aa11.4□□□□□ -0.58
GYPB-206ENST00000506516 LRRIQ1Q96JM4 1722 aa11.4□□□□□ -0.58
GYPB-206ENST00000506516 FANCAO15360 1455 aa11.39□□□□□ -0.59
GYPB-206ENST00000506516 AKNAQ7Z591 1439 aa11.39□□□□□ -0.59
GYPB-206ENST00000506516 ARAP3Q8WWN8 1544 aa11.39□□□□□ -0.59
GYPB-206ENST00000506516 RAPGEF3O95398 923 aa11.38□□□□□ -0.59
GYPB-206ENST00000506516 TTC37Q6PGP7 1564 aa11.37□□□□□ -0.59
GYPB-206ENST00000506516 FKBP8Q14318 412 aa11.36□□□□□ -0.59
GYPB-206ENST00000506516 CFDP1Q9UEE9 299 aaPredicted RBP11.36□□□□□ -0.59
GYPB-206ENST00000506516 CCNB3Q8WWL7 1395 aa11.36□□□□□ -0.59
GYPB-206ENST00000506516 ZNF777Q9ULD5 760 aaPredicted RBP11.35□□□□□ -0.59
GYPB-206ENST00000506516 DENND4BO75064 1496 aaPredicted RBP11.35□□□□□ -0.59
GYPB-206ENST00000506516 CFAP74Q9C0B2 1584 aa11.35□□□□□ -0.59
GYPB-206ENST00000506516 ARHGAP5Q13017 1502 aa11.35□□□□□ -0.59
GYPB-206ENST00000506516 MAP3K1Q13233 1512 aa11.34□□□□□ -0.59
GYPB-206ENST00000506516 SCAPERQ9BY12 1400 aa11.34□□□□□ -0.59
GYPB-206ENST00000506516 ADGRL1O94910 1474 aa11.33□□□□□ -0.6
GYPB-206ENST00000506516 KANK4Q5T7N3 995 aaPredicted RBP11.33□□□□□ -0.6
GYPB-206ENST00000506516 EHBP1L1Q8N3D4 1523 aa11.33□□□□□ -0.6
GYPB-206ENST00000506516 TIAM1Q13009 1591 aa11.33□□□□□ -0.6
GYPB-206ENST00000506516 MYO5CQ9NQX4 1742 aa11.32□□□□□ -0.6
GYPB-206ENST00000506516 GPATCH8Q9UKJ3 1502 aaKnown RBP11.32□□□□□ -0.6
GYPB-206ENST00000506516 MYT1LQ9UL68 1186 aa11.32□□□□□ -0.6
GYPB-206ENST00000506516 LRRC9Q6ZRR7 1453 aa11.32□□□□□ -0.6
GYPB-206ENST00000506516 POLA2Q14181 598 aa11.31□□□□□ -0.6
GYPB-206ENST00000506516 AFAP1Q8N556 730 aa11.3□□□□□ -0.6
GYPB-206ENST00000506516 NCOA2Q15596 1464 aa11.28□□□□□ -0.6
GYPB-206ENST00000506516 HNRNPMP52272 730 aaKnown RBP eCLIP11.28□□□□□ -0.6
GYPB-206ENST00000506516 PREX2Q70Z35 1606 aa11.27□□□□□ -0.6
GYPB-206ENST00000506516 POGZQ7Z3K3 1410 aa11.27□□□□□ -0.6
GYPB-206ENST00000506516 MAGI2Q86UL8 1455 aa11.27□□□□□ -0.6
GYPB-206ENST00000506516 SUPT6HQ7KZ85 1726 aaKnown RBP11.27□□□□□ -0.61
GYPB-206ENST00000506516 CDC42BPBQ9Y5S2 1711 aa11.27□□□□□ -0.61
GYPB-206ENST00000506516 KIAA1107Q9UPP5 1409 aa11.26□□□□□ -0.61
GYPB-206ENST00000506516 ZNF518AQ6AHZ1 1483 aa11.26□□□□□ -0.61
GYPB-206ENST00000506516 PLEKHH2Q8IVE3 1493 aa11.26□□□□□ -0.61
GYPB-206ENST00000506516 RSPH4AQ5TD94 716 aa11.26□□□□□ -0.61
GYPB-206ENST00000506516 CDC42BPAQ5VT25 1732 aa11.25□□□□□ -0.61
GYPB-206ENST00000506516 ARID4BQ4LE39 1312 aaPredicted RBP11.25□□□□□ -0.61
GYPB-206ENST00000506516 ZNF644Q9H582 1327 aaPredicted RBP11.25□□□□□ -0.61
GYPB-206ENST00000506516 RICTORQ6R327 1708 aa11.23□□□□□ -0.61
GYPB-206ENST00000506516 KDM4FA0A1W2PPD8 638 aa11.23□□□□□ -0.61
GYPB-206ENST00000506516 SPAG9O60271 1321 aaKnown RBP11.23□□□□□ -0.61
GYPB-206ENST00000506516 TRAPPC8Q9Y2L5 1435 aa11.23□□□□□ -0.61
GYPB-206ENST00000506516 ABCC1P33527 1531 aa11.23□□□□□ -0.61
GYPB-206ENST00000506516 ARHGEF12Q9NZN5 1544 aa11.23□□□□□ -0.61
GYPB-206ENST00000506516 FRMPD1Q5SYB0 1578 aa11.23□□□□□ -0.61
GYPB-206ENST00000506516 TSPY4P0CV99 314 aa11.22□□□□□ -0.61
GYPB-206ENST00000506516 TSPY10P0CW01 314 aa11.22□□□□□ -0.61
GYPB-206ENST00000506516 ZMYM4Q5VZL5 1548 aa11.22□□□□□ -0.61
GYPB-206ENST00000506516 MIA2Q96PC5 1412 aa11.22□□□□□ -0.61
GYPB-206ENST00000506516 ITSN2Q9NZM3 1697 aa11.22□□□□□ -0.61
GYPB-206ENST00000506516 SAMD9LQ8IVG5 1584 aa11.21□□□□□ -0.61
GYPB-206ENST00000506516 ZFYVE16Q7Z3T8 1539 aa11.21□□□□□ -0.61
GYPB-206ENST00000506516 MLH3Q9UHC1 1453 aa11.21□□□□□ -0.61
GYPB-206ENST00000506516 MYOM3Q5VTT5 1437 aa11.21□□□□□ -0.61
GYPB-206ENST00000506516 MKRN4PQ13434 485 aaPredicted RBP11.21□□□□□ -0.61
GYPB-206ENST00000506516 ATP10AO60312 1499 aa11.2□□□□□ -0.62
GYPB-206ENST00000506516 YEATS2Q9ULM3 1422 aa11.2□□□□□ -0.62
GYPB-206ENST00000506516 SYCP2Q9BX26 1530 aa11.19□□□□□ -0.62
GYPB-206ENST00000506516 KDM5CP41229 1560 aa11.19□□□□□ -0.62
GYPB-206ENST00000506516 MBD5Q9P267 1494 aa11.19□□□□□ -0.62
GYPB-206ENST00000506516 CAMSAP2Q08AD1 1489 aa11.18□□□□□ -0.62
GYPB-206ENST00000506516 C9orf84Q5VXU9 1444 aa11.18□□□□□ -0.62
GYPB-206ENST00000506516 MLECQ14165 292 aa11.17□□□□□ -0.62
GYPB-206ENST00000506516 PPARGC1BQ86YN6 1023 aaKnown RBP11.17□□□□□ -0.62
GYPB-206ENST00000506516 ARHGEF40Q8TER5 1519 aa11.17□□□□□ -0.62
GYPB-206ENST00000506516 HECW2Q9P2P5 1572 aa11.16□□□□□ -0.62
GYPB-206ENST00000506516 RTEL1-TNFRSF6BF6WH68 1400 aa11.16□□□□□ -0.62
GYPB-206ENST00000506516 CCDC141Q6ZP82 1450 aa11.15□□□□□ -0.62
GYPB-206ENST00000506516 ZBTB12Q9Y330 459 aaPredicted RBP11.15□□□□□ -0.62
GYPB-206ENST00000506516 FAM50AQ14320 339 aaKnown RBP11.14□□□□□ -0.63
GYPB-206ENST00000506516 ESF1Q9H501 851 aaKnown RBP11.14□□□□□ -0.63
GYPB-206ENST00000506516 FGD6Q6ZV73 1430 aa11.14□□□□□ -0.63
GYPB-206ENST00000506516 ATP7AQ04656 1500 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms