RNA–Protein interactions for RNA: ENST00000506437.1

ITGA3-208, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 3,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-208ENST00000506437 TTC37Q6PGP7 1564 aa16.93■□□□□ 0.3
ITGA3-208ENST00000506437 RRP7BPQ9NSQ0 103 aa16.92■□□□□ 0.3
ITGA3-208ENST00000506437 RRBP1Q9P2E9 1410 aaKnown RBP16.92■□□□□ 0.3
ITGA3-208ENST00000506437 GPATCH8Q9UKJ3 1502 aaKnown RBP16.92■□□□□ 0.3
ITGA3-208ENST00000506437 FAM69CQ0P6D2 419 aa16.92■□□□□ 0.3
ITGA3-208ENST00000506437 ANP32EQ9BTT0 268 aa16.91■□□□□ 0.3
ITGA3-208ENST00000506437 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.91■□□□□ 0.3
ITGA3-208ENST00000506437 WDR7Q9Y4E6 1490 aa16.91■□□□□ 0.3
ITGA3-208ENST00000506437 PTPRKQ15262 1439 aa16.89■□□□□ 0.29
ITGA3-208ENST00000506437 ABCC10Q5T3U5 1492 aa16.88■□□□□ 0.29
ITGA3-208ENST00000506437 PTPN23Q9H3S7 1636 aa16.87■□□□□ 0.29
ITGA3-208ENST00000506437 TRHP20396 242 aaPredicted RBP16.87■□□□□ 0.29
ITGA3-208ENST00000506437 CDC42BPAQ5VT25 1732 aa16.86■□□□□ 0.29
ITGA3-208ENST00000506437 YTHDC1Q96MU7 727 aaKnown RBP16.85■□□□□ 0.29
ITGA3-208ENST00000506437 ARHGAP5Q13017 1502 aa16.85■□□□□ 0.29
ITGA3-208ENST00000506437 MYT1LQ9UL68 1186 aa16.84■□□□□ 0.29
ITGA3-208ENST00000506437 AFAP1Q8N556 730 aa16.83■□□□□ 0.28
ITGA3-208ENST00000506437 CAMSAP2Q08AD1 1489 aa16.82■□□□□ 0.28
ITGA3-208ENST00000506437 CDC42BPBQ9Y5S2 1711 aa16.82■□□□□ 0.28
ITGA3-208ENST00000506437 TSPOAP1O95153 1857 aa16.81■□□□□ 0.28
ITGA3-208ENST00000506437 ERICH6Q7L0X2 663 aa16.79■□□□□ 0.28
ITGA3-208ENST00000506437 CD109Q6YHK3 1445 aa16.79■□□□□ 0.28
ITGA3-208ENST00000506437 EFCAB2Q5VUJ9 269 aa16.78■□□□□ 0.28
ITGA3-208ENST00000506437 CCER1Q8TC90 406 aaPredicted RBP16.78■□□□□ 0.28
ITGA3-208ENST00000506437 RAPGEF3O95398 923 aa16.78■□□□□ 0.28
ITGA3-208ENST00000506437 PLCH2O75038 1416 aa16.76■□□□□ 0.27
ITGA3-208ENST00000506437 MIA2Q96PC5 1412 aa16.76■□□□□ 0.27
ITGA3-208ENST00000506437 MYO5CQ9NQX4 1742 aa16.75■□□□□ 0.27
ITGA3-208ENST00000506437 SYCP2Q9BX26 1530 aa16.75■□□□□ 0.27
ITGA3-208ENST00000506437 ABCC5O15440 1437 aa16.75■□□□□ 0.27
ITGA3-208ENST00000506437 SAMD9LQ8IVG5 1584 aa16.75■□□□□ 0.27
ITGA3-208ENST00000506437 DIEXFQ68CQ4 756 aaKnown RBP16.75■□□□□ 0.27
ITGA3-208ENST00000506437 ARHGEF12Q9NZN5 1544 aa16.75■□□□□ 0.27
ITGA3-208ENST00000506437 FANCAO15360 1455 aa16.75■□□□□ 0.27
ITGA3-208ENST00000506437 ITSN2Q9NZM3 1697 aa16.74■□□□□ 0.27
ITGA3-208ENST00000506437 PREX2Q70Z35 1606 aa16.74■□□□□ 0.27
ITGA3-208ENST00000506437 DAPK1P53355 1430 aa16.74■□□□□ 0.27
ITGA3-208ENST00000506437 TSPY4P0CV99 314 aa16.73■□□□□ 0.27
ITGA3-208ENST00000506437 TSPY10P0CW01 314 aa16.73■□□□□ 0.27
ITGA3-208ENST00000506437 RAB3GAP2Q9H2M9 1393 aa16.73■□□□□ 0.27
ITGA3-208ENST00000506437 TRAPPC8Q9Y2L5 1435 aa16.72■□□□□ 0.27
ITGA3-208ENST00000506437 TCOF1Q13428 1488 aaKnown RBP16.71■□□□□ 0.27
ITGA3-208ENST00000506437 MAPKBP1O60336 1514 aa16.71■□□□□ 0.26
ITGA3-208ENST00000506437 SCAPERQ9BY12 1400 aa16.7■□□□□ 0.26
ITGA3-208ENST00000506437 TRIM52Q96A61 297 aa16.7■□□□□ 0.26
ITGA3-208ENST00000506437 ABCA9Q8IUA7 1624 aa16.7■□□□□ 0.26
ITGA3-208ENST00000506437 MBD5Q9P267 1494 aa16.68■□□□□ 0.26
ITGA3-208ENST00000506437 DIP2BQ9P265 1576 aa16.67■□□□□ 0.26
ITGA3-208ENST00000506437 ADGRL1O94910 1474 aa16.67■□□□□ 0.26
ITGA3-208ENST00000506437 FOXD1Q16676 465 aa16.67■□□□□ 0.26
ITGA3-208ENST00000506437 KDM6BO15054 1643 aa16.67■□□□□ 0.26
ITGA3-208ENST00000506437 AKNAQ7Z591 1439 aa16.66■□□□□ 0.26
ITGA3-208ENST00000506437 SETD5Q9C0A6 1442 aa16.66■□□□□ 0.26
ITGA3-208ENST00000506437 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.66■□□□□ 0.26
ITGA3-208ENST00000506437 C9orf84Q5VXU9 1444 aa16.65■□□□□ 0.26
ITGA3-208ENST00000506437 DNMT1P26358 1616 aaKnown RBP16.64■□□□□ 0.25
ITGA3-208ENST00000506437 NAIPQ13075 1403 aa16.64■□□□□ 0.25
ITGA3-208ENST00000506437 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.64■□□□□ 0.25
ITGA3-208ENST00000506437 SPAG9O60271 1321 aaKnown RBP16.63■□□□□ 0.25
ITGA3-208ENST00000506437 KIF13AQ9H1H9 1805 aa16.62■□□□□ 0.25
ITGA3-208ENST00000506437 CCDC141Q6ZP82 1450 aa16.61■□□□□ 0.25
ITGA3-208ENST00000506437 NCOA1Q15788 1441 aa16.6■□□□□ 0.25
ITGA3-208ENST00000506437 ABCC1P33527 1531 aa16.6■□□□□ 0.25
ITGA3-208ENST00000506437 KIF15Q9NS87 1388 aa16.59■□□□□ 0.25
ITGA3-208ENST00000506437 HFM1A2PYH4 1435 aa16.58■□□□□ 0.24
ITGA3-208ENST00000506437 MAP3K4Q9Y6R4 1608 aa16.58■□□□□ 0.24
ITGA3-208ENST00000506437 ANKRD30AQ9BXX3 1397 aa16.57■□□□□ 0.24
ITGA3-208ENST00000506437 COL17A1Q9UMD9 1497 aaPredicted RBP16.57■□□□□ 0.24
ITGA3-208ENST00000506437 SIN3AQ96ST3 1273 aa16.56■□□□□ 0.24
ITGA3-208ENST00000506437 ANO8Q9HCE9 1232 aaPredicted RBP16.55■□□□□ 0.24
ITGA3-208ENST00000506437 DHX57Q6P158 1386 aaKnown RBP16.55■□□□□ 0.24
ITGA3-208ENST00000506437 TSHZ2Q9NRE2 1034 aa16.55■□□□□ 0.24
ITGA3-208ENST00000506437 KIAA1107Q9UPP5 1409 aa16.54■□□□□ 0.24
ITGA3-208ENST00000506437 PPRC1Q5VV67 1664 aaKnown RBP16.54■□□□□ 0.24
ITGA3-208ENST00000506437 CROCC2H7BZ55 1655 aa16.53■□□□□ 0.24
ITGA3-208ENST00000506437 ANKRD50Q9ULJ7 1429 aa16.53■□□□□ 0.24
ITGA3-208ENST00000506437 PLEKHH2Q8IVE3 1493 aa16.52■□□□□ 0.24
ITGA3-208ENST00000506437 KIF3BO15066 747 aa16.52■□□□□ 0.23
ITGA3-208ENST00000506437 MLECQ14165 292 aa16.52■□□□□ 0.23
ITGA3-208ENST00000506437 RSPH4AQ5TD94 716 aa16.51■□□□□ 0.23
ITGA3-208ENST00000506437 GGT6Q6P531 493 aa16.51■□□□□ 0.23
ITGA3-208ENST00000506437 YEATS2Q9ULM3 1422 aa16.51■□□□□ 0.23
ITGA3-208ENST00000506437 GLI2P10070 1586 aa16.51■□□□□ 0.23
ITGA3-208ENST00000506437 DENND4BO75064 1496 aaPredicted RBP16.5■□□□□ 0.23
ITGA3-208ENST00000506437 ARHGEF5Q12774 1597 aa16.5■□□□□ 0.23
ITGA3-208ENST00000506437 SLC4A1APQ9BWU0 796 aaKnown RBP16.5■□□□□ 0.23
ITGA3-208ENST00000506437 POGZQ7Z3K3 1410 aa16.49■□□□□ 0.23
ITGA3-208ENST00000506437 ROCK1Q13464 1354 aa16.49■□□□□ 0.23
ITGA3-208ENST00000506437 ARAP3Q8WWN8 1544 aa16.48■□□□□ 0.23
ITGA3-208ENST00000506437 NUP155O75694 1391 aa16.48■□□□□ 0.23
ITGA3-208ENST00000506437 MPHOSPH9Q99550 1183 aa16.48■□□□□ 0.23
ITGA3-208ENST00000506437 ZNF518AQ6AHZ1 1483 aa16.47■□□□□ 0.23
ITGA3-208ENST00000506437 PLPPR3Q6T4P5 718 aa16.47■□□□□ 0.23
ITGA3-208ENST00000506437 ADGBQ8N7X0 1667 aa16.46■□□□□ 0.23
ITGA3-208ENST00000506437 NEO1Q92859 1461 aa16.46■□□□□ 0.23
ITGA3-208ENST00000506437 ATP7AQ04656 1500 aa16.46■□□□□ 0.23
ITGA3-208ENST00000506437 ZFYVE16Q7Z3T8 1539 aa16.46■□□□□ 0.23
ITGA3-208ENST00000506437 ADGRL2O95490 1459 aa16.45■□□□□ 0.22
ITGA3-208ENST00000506437 SHANK2Q9UPX8 1470 aa16.44■□□□□ 0.22
ITGA3-208ENST00000506437 GCC2Q8IWJ2 1684 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms