RNA–Protein interactions for RNA: ENST00000506430.2

AP3S1-204, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5

Gene AP3S1, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-204ENST00000506430 ARHGEF40Q8TER5 1519 aa27.94■■■□□ 2.06
AP3S1-204ENST00000506430 ZMYM4Q5VZL5 1548 aa27.93■■■□□ 2.06
AP3S1-204ENST00000506430 ARHGAP5Q13017 1502 aa27.92■■■□□ 2.06
AP3S1-204ENST00000506430 ADAMTSL3P82987 1691 aa27.91■■■□□ 2.06
AP3S1-204ENST00000506430 ZFYVE16Q7Z3T8 1539 aa27.89■■■□□ 2.06
AP3S1-204ENST00000506430 MAGI2Q86UL8 1455 aa27.89■■■□□ 2.05
AP3S1-204ENST00000506430 BCORL1Q5H9F3 1711 aa27.87■■■□□ 2.05
AP3S1-204ENST00000506430 AFAP1Q8N556 730 aa27.87■■■□□ 2.05
AP3S1-204ENST00000506430 PTPRMP28827 1452 aa27.87■■■□□ 2.05
AP3S1-204ENST00000506430 HECW2Q9P2P5 1572 aa27.86■■■□□ 2.05
AP3S1-204ENST00000506430 CDC42BPBQ9Y5S2 1711 aa27.84■■■□□ 2.05
AP3S1-204ENST00000506430 SIGLEC1Q9BZZ2 1709 aa27.82■■■□□ 2.04
AP3S1-204ENST00000506430 MADDQ8WXG6 1647 aa27.81■■■□□ 2.04
AP3S1-204ENST00000506430 CEP162Q5TB80 1403 aa27.81■■■□□ 2.04
AP3S1-204ENST00000506430 ZNF518AQ6AHZ1 1483 aa27.79■■■□□ 2.04
AP3S1-204ENST00000506430 LOC105371045A0A1W2PR82 267 aa27.79■■■□□ 2.04
AP3S1-204ENST00000506430 MLECQ14165 292 aa27.79■■■□□ 2.04
AP3S1-204ENST00000506430 PREX2Q70Z35 1606 aa27.78■■■□□ 2.04
AP3S1-204ENST00000506430 ATP10AO60312 1499 aa27.78■■■□□ 2.04
AP3S1-204ENST00000506430 ARHGEF12Q9NZN5 1544 aa27.77■■■□□ 2.04
AP3S1-204ENST00000506430 MYT1LQ9UL68 1186 aa27.75■■■□□ 2.03
AP3S1-204ENST00000506430 TRAPPC8Q9Y2L5 1435 aa27.75■■■□□ 2.03
AP3S1-204ENST00000506430 ZNF777Q9ULD5 760 aaPredicted RBP27.74■■■□□ 2.03
AP3S1-204ENST00000506430 KDM5CP41229 1560 aa27.73■■■□□ 2.03
AP3S1-204ENST00000506430 CDC42BPAQ5VT25 1732 aa27.72■■■□□ 2.03
AP3S1-204ENST00000506430 GPATCH8Q9UKJ3 1502 aaKnown RBP27.72■■■□□ 2.03
AP3S1-204ENST00000506430 C9orf84Q5VXU9 1444 aa27.72■■■□□ 2.03
AP3S1-204ENST00000506430 ABCC1P33527 1531 aa27.72■■■□□ 2.03
AP3S1-204ENST00000506430 RIMS1Q86UR5 1692 aaKnown RBP27.71■■■□□ 2.03
AP3S1-204ENST00000506430 PLPPR3Q6T4P5 718 aa27.7■■■□□ 2.02
AP3S1-204ENST00000506430 MTUS2Q5JR59 1369 aa27.7■■■□□ 2.02
AP3S1-204ENST00000506430 MLH3Q9UHC1 1453 aa27.67■■■□□ 2.02
AP3S1-204ENST00000506430 CCNB3Q8WWL7 1395 aa27.65■■■□□ 2.02
AP3S1-204ENST00000506430 CFDP1Q9UEE9 299 aaPredicted RBP27.65■■■□□ 2.02
AP3S1-204ENST00000506430 ITSN2Q9NZM3 1697 aa27.65■■■□□ 2.02
AP3S1-204ENST00000506430 HNRNPMP52272 730 aaKnown RBP eCLIP27.64■■■□□ 2.02
AP3S1-204ENST00000506430 SAMD9LQ8IVG5 1584 aa27.63■■■□□ 2.01
AP3S1-204ENST00000506430 DIP2CQ9Y2E4 1556 aa27.63■■■□□ 2.01
AP3S1-204ENST00000506430 ABCA6Q8N139 1617 aa27.59■■■□□ 2.01
AP3S1-204ENST00000506430 SYCP2Q9BX26 1530 aa27.58■■■□□ 2.01
AP3S1-204ENST00000506430 FER1L4A9Z1Z3 1794 aa27.57■■■□□ 2
AP3S1-204ENST00000506430 LMTK3Q96Q04 1460 aa27.57■■■□□ 2
AP3S1-204ENST00000506430 ZNF644Q9H582 1327 aaPredicted RBP27.56■■■□□ 2
AP3S1-204ENST00000506430 EHBP1L1Q8N3D4 1523 aa27.56■■■□□ 2
AP3S1-204ENST00000506430 KIAA1107Q9UPP5 1409 aa27.55■■■□□ 2
AP3S1-204ENST00000506430 KIDINS220Q9ULH0 1771 aa27.55■■■□□ 2
AP3S1-204ENST00000506430 CEBPAP49715 358 aaPredicted RBP27.54■■■□□ 2
AP3S1-204ENST00000506430 REREQ9P2R6 1566 aa27.54■■■□□ 2
AP3S1-204ENST00000506430 SPAG9O60271 1321 aaKnown RBP27.53■■■□□ 2
AP3S1-204ENST00000506430 TIAM1Q13009 1591 aa27.52■■■□□ 2
AP3S1-204ENST00000506430 PLEKHH2Q8IVE3 1493 aa27.51■■■□□ 2
AP3S1-204ENST00000506430 HSPA2P54652 639 aa27.5■■□□□ 1.99
AP3S1-204ENST00000506430 VPS8Q8N3P4 1428 aa27.5■■□□□ 1.99
AP3S1-204ENST00000506430 AGLP35573 1532 aa27.48■■□□□ 1.99
AP3S1-204ENST00000506430 NCOA2Q15596 1464 aa27.45■■□□□ 1.99
AP3S1-204ENST00000506430 ILDR1Q86SU0 546 aaPredicted RBP27.45■■□□□ 1.98
AP3S1-204ENST00000506430 ATP7AQ04656 1500 aa27.42■■□□□ 1.98
AP3S1-204ENST00000506430 MBD5Q9P267 1494 aa27.42■■□□□ 1.98
AP3S1-204ENST00000506430 ESF1Q9H501 851 aaKnown RBP27.4■■□□□ 1.98
AP3S1-204ENST00000506430 SUPT6HQ7KZ85 1726 aaKnown RBP27.39■■□□□ 1.98
AP3S1-204ENST00000506430 KANK4Q5T7N3 995 aaPredicted RBP27.39■■□□□ 1.98
AP3S1-204ENST00000506430 INO80Q9ULG1 1556 aaPredicted RBP27.39■■□□□ 1.97
AP3S1-204ENST00000506430 LRRC9Q6ZRR7 1453 aa27.38■■□□□ 1.97
AP3S1-204ENST00000506430 A2MP01023 1474 aa27.35■■□□□ 1.97
AP3S1-204ENST00000506430 CAMSAP2Q08AD1 1489 aa27.32■■□□□ 1.96
AP3S1-204ENST00000506430 PLXNC1O60486 1568 aa27.31■■□□□ 1.96
AP3S1-204ENST00000506430 C3P01024 1663 aa27.3■■□□□ 1.96
AP3S1-204ENST00000506430 GGT6Q6P531 493 aa27.29■■□□□ 1.96
AP3S1-204ENST00000506430 RTEL1-TNFRSF6BF6WH68 1400 aa27.29■■□□□ 1.96
AP3S1-204ENST00000506430 CNTLNQ9NXG0 1405 aa27.29■■□□□ 1.96
AP3S1-204ENST00000506430 MAP3K1Q13233 1512 aa27.29■■□□□ 1.96
AP3S1-204ENST00000506430 PREX1Q8TCU6 1659 aa27.29■■□□□ 1.96
AP3S1-204ENST00000506430 RSPH4AQ5TD94 716 aa27.27■■□□□ 1.96
AP3S1-204ENST00000506430 CCDC141Q6ZP82 1450 aa27.26■■□□□ 1.95
AP3S1-204ENST00000506430 UHRF1BP1Q6BDS2 1440 aa27.26■■□□□ 1.95
AP3S1-204ENST00000506430 ZMYM3Q14202 1370 aa27.26■■□□□ 1.95
AP3S1-204ENST00000506430 SETD1BQ9UPS6 1966 aaKnown RBP27.24■■□□□ 1.95
AP3S1-204ENST00000506430 ADGBQ8N7X0 1667 aa27.23■■□□□ 1.95
AP3S1-204ENST00000506430 DHX29Q7Z478 1369 aaKnown RBP27.22■■□□□ 1.95
AP3S1-204ENST00000506430 TSPY4P0CV99 314 aa27.19■■□□□ 1.94
AP3S1-204ENST00000506430 TSPY10P0CW01 314 aa27.19■■□□□ 1.94
AP3S1-204ENST00000506430 APLP2Q06481 763 aa27.18■■□□□ 1.94
AP3S1-204ENST00000506430 KIF3BO15066 747 aa27.17■■□□□ 1.94
AP3S1-204ENST00000506430 PPP6R1Q9UPN7 881 aa27.17■■□□□ 1.94
AP3S1-204ENST00000506430 ARHGEF5Q12774 1597 aa27.17■■□□□ 1.94
AP3S1-204ENST00000506430 CLTCQ00610 1675 aaKnown RBP27.17■■□□□ 1.94
AP3S1-204ENST00000506430 MYOM3Q5VTT5 1437 aa27.16■■□□□ 1.94
AP3S1-204ENST00000506430 MROH2AA6NES4 1674 aa27.16■■□□□ 1.94
AP3S1-204ENST00000506430 NPATQ14207 1427 aa27.15■■□□□ 1.94
AP3S1-204ENST00000506430 MIA2Q96PC5 1412 aa27.14■■□□□ 1.93
AP3S1-204ENST00000506430 FBXO41Q8TF61 875 aa27.12■■□□□ 1.93
AP3S1-204ENST00000506430 STRCQ7RTU9 1775 aa27.12■■□□□ 1.93
AP3S1-204ENST00000506430 PTPRKQ15262 1439 aa27.1■■□□□ 1.93
AP3S1-204ENST00000506430 DMRT2Q9Y5R5 561 aa27.08■■□□□ 1.93
AP3S1-204ENST00000506430 WASHC2CQ9Y4E1 1318 aa27.04■■□□□ 1.92
AP3S1-204ENST00000506430 CERKQ8TCT0 537 aa27.03■■□□□ 1.92
AP3S1-204ENST00000506430 MAST1Q9Y2H9 1570 aa27.03■■□□□ 1.92
AP3S1-204ENST00000506430 FBXO31Q5XUX0 539 aaPredicted RBP27.02■■□□□ 1.92
AP3S1-204ENST00000506430 NCOA1Q15788 1441 aa27■■□□□ 1.91
AP3S1-204ENST00000506430 CAMSAP1Q5T5Y3 1602 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms