RNA–Protein interactions for RNA: ENST00000506351.6

TNPO1-204, Transcript of transportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNPO1, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-204ENST00000506351 PREX2Q70Z35 1606 aa10.65□□□□□ -0.71
TNPO1-204ENST00000506351 CDC42BPBQ9Y5S2 1711 aa10.64□□□□□ -0.71
TNPO1-204ENST00000506351 ROCK1Q13464 1354 aa10.64□□□□□ -0.71
TNPO1-204ENST00000506351 ABCC2Q92887 1545 aa10.63□□□□□ -0.71
TNPO1-204ENST00000506351 DENND4BO75064 1496 aaPredicted RBP10.61□□□□□ -0.71
TNPO1-204ENST00000506351 RRP7BPQ9NSQ0 103 aa10.61□□□□□ -0.71
TNPO1-204ENST00000506351 CHIC2Q9UKJ5 165 aa10.61□□□□□ -0.71
TNPO1-204ENST00000506351 SIN3AQ96ST3 1273 aa10.61□□□□□ -0.71
TNPO1-204ENST00000506351 MYO5CQ9NQX4 1742 aa10.61□□□□□ -0.71
TNPO1-204ENST00000506351 ADGRL2O95490 1459 aa10.61□□□□□ -0.71
TNPO1-204ENST00000506351 ZCCHC11Q5TAX3 1644 aaKnown RBP10.61□□□□□ -0.71
TNPO1-204ENST00000506351 ZNF644Q9H582 1327 aaPredicted RBP10.6□□□□□ -0.71
TNPO1-204ENST00000506351 TTC37Q6PGP7 1564 aa10.6□□□□□ -0.71
TNPO1-204ENST00000506351 ARHGEF5Q12774 1597 aa10.59□□□□□ -0.71
TNPO1-204ENST00000506351 TIMELESSQ9UNS1 1208 aa10.59□□□□□ -0.71
TNPO1-204ENST00000506351 SHANK2Q9UPX8 1470 aa10.59□□□□□ -0.71
TNPO1-204ENST00000506351 SAMD9LQ8IVG5 1584 aa10.59□□□□□ -0.71
TNPO1-204ENST00000506351 PLEKHD1A6NEE1 506 aa10.58□□□□□ -0.72
TNPO1-204ENST00000506351 NEUROD1Q13562 356 aa10.58□□□□□ -0.72
TNPO1-204ENST00000506351 CFDP1Q9UEE9 299 aaPredicted RBP10.58□□□□□ -0.72
TNPO1-204ENST00000506351 KDM5BQ9UGL1 1544 aa10.57□□□□□ -0.72
TNPO1-204ENST00000506351 UHRF1BP1LA0JNW5 1464 aa10.56□□□□□ -0.72
TNPO1-204ENST00000506351 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.56□□□□□ -0.72
TNPO1-204ENST00000506351 TONSLQ96HA7 1378 aa10.54□□□□□ -0.72
TNPO1-204ENST00000506351 NCOA1Q15788 1441 aa10.54□□□□□ -0.72
TNPO1-204ENST00000506351 ACIN1Q9UKV3 1341 aaKnown RBP10.54□□□□□ -0.72
TNPO1-204ENST00000506351 C9orf84Q5VXU9 1444 aa10.53□□□□□ -0.72
TNPO1-204ENST00000506351 TRIM52Q96A61 297 aa10.52□□□□□ -0.72
TNPO1-204ENST00000506351 ZNF777Q9ULD5 760 aaPredicted RBP10.52□□□□□ -0.72
TNPO1-204ENST00000506351 MAST1Q9Y2H9 1570 aa10.52□□□□□ -0.72
TNPO1-204ENST00000506351 PZPP20742 1482 aa10.52□□□□□ -0.73
TNPO1-204ENST00000506351 ANKRD30AQ9BXX3 1397 aa10.51□□□□□ -0.73
TNPO1-204ENST00000506351 PPP1R15AO75807 674 aaPredicted RBP10.51□□□□□ -0.73
TNPO1-204ENST00000506351 ARHGAP5Q13017 1502 aa10.51□□□□□ -0.73
TNPO1-204ENST00000506351 SYCP2Q9BX26 1530 aa10.51□□□□□ -0.73
TNPO1-204ENST00000506351 MBD5Q9P267 1494 aa10.51□□□□□ -0.73
TNPO1-204ENST00000506351 MIER1Q8N108 512 aa10.51□□□□□ -0.73
TNPO1-204ENST00000506351 CCDC141Q6ZP82 1450 aa10.51□□□□□ -0.73
TNPO1-204ENST00000506351 KDM5DQ9BY66 1539 aa10.5□□□□□ -0.73
TNPO1-204ENST00000506351 MPHOSPH9Q99550 1183 aa10.5□□□□□ -0.73
TNPO1-204ENST00000506351 PLXNC1O60486 1568 aa10.49□□□□□ -0.73
TNPO1-204ENST00000506351 RPRD2Q5VT52 1461 aaKnown RBP10.48□□□□□ -0.73
TNPO1-204ENST00000506351 ANKRD50Q9ULJ7 1429 aa10.48□□□□□ -0.73
TNPO1-204ENST00000506351 ANKRD30BQ9BXX2 1392 aa10.47□□□□□ -0.73
TNPO1-204ENST00000506351 TEX14Q8IWB6 1497 aa10.47□□□□□ -0.73
TNPO1-204ENST00000506351 UNC13BO14795 1591 aa10.46□□□□□ -0.73
TNPO1-204ENST00000506351 PLEKHH2Q8IVE3 1493 aa10.46□□□□□ -0.73
TNPO1-204ENST00000506351 ABCC1P33527 1531 aa10.46□□□□□ -0.73
TNPO1-204ENST00000506351 ARAP3Q8WWN8 1544 aa10.45□□□□□ -0.74
TNPO1-204ENST00000506351 POLR1AO95602 1720 aaPredicted RBP10.45□□□□□ -0.74
TNPO1-204ENST00000506351 KIF15Q9NS87 1388 aa10.44□□□□□ -0.74
TNPO1-204ENST00000506351 KIAA1107Q9UPP5 1409 aa10.44□□□□□ -0.74
TNPO1-204ENST00000506351 FOXD1Q16676 465 aa10.44□□□□□ -0.74
TNPO1-204ENST00000506351 ABCA9Q8IUA7 1624 aa10.44□□□□□ -0.74
TNPO1-204ENST00000506351 HNRNPMP52272 730 aaKnown RBP eCLIP10.44□□□□□ -0.749e-6■■■■□ 22.2
TNPO1-204ENST00000506351 SLC4A1APQ9BWU0 796 aaKnown RBP10.43□□□□□ -0.74
TNPO1-204ENST00000506351 PLCH2O75038 1416 aa10.43□□□□□ -0.74
TNPO1-204ENST00000506351 ARHGEF12Q9NZN5 1544 aa10.42□□□□□ -0.74
TNPO1-204ENST00000506351 WDR7Q9Y4E6 1490 aa10.42□□□□□ -0.74
TNPO1-204ENST00000506351 CENPBP07199 599 aaPredicted RBP10.42□□□□□ -0.74
TNPO1-204ENST00000506351 TSPY4P0CV99 314 aa10.42□□□□□ -0.74
TNPO1-204ENST00000506351 TSPY10P0CW01 314 aa10.42□□□□□ -0.74
TNPO1-204ENST00000506351 IQGAP3Q86VI3 1631 aa10.41□□□□□ -0.74
TNPO1-204ENST00000506351 RSPH4AQ5TD94 716 aa10.41□□□□□ -0.74
TNPO1-204ENST00000506351 FAM135AQ9P2D6 1515 aa10.4□□□□□ -0.74
TNPO1-204ENST00000506351 DUOX2Q9NRD8 1548 aa10.4□□□□□ -0.75
TNPO1-204ENST00000506351 KCNH8Q96L42 1107 aa10.39□□□□□ -0.75
TNPO1-204ENST00000506351 L3MBTL2Q969R5 705 aa10.38□□□□□ -0.75
TNPO1-204ENST00000506351 NUP155O75694 1391 aa10.38□□□□□ -0.75
TNPO1-204ENST00000506351 MAGI2Q86UL8 1455 aa10.38□□□□□ -0.75
TNPO1-204ENST00000506351 ZFYVE16Q7Z3T8 1539 aa10.38□□□□□ -0.75
TNPO1-204ENST00000506351 INO80Q9ULG1 1556 aaPredicted RBP10.38□□□□□ -0.75
TNPO1-204ENST00000506351 SCAF1Q9H7N4 1312 aaKnown RBP10.37□□□□□ -0.75
TNPO1-204ENST00000506351 YTHDC1Q96MU7 727 aaKnown RBP10.37□□□□□ -0.75
TNPO1-204ENST00000506351 HIRIP3Q9BW71 556 aaPredicted RBP10.37□□□□□ -0.75
TNPO1-204ENST00000506351 PKD2Q13563 968 aa10.36□□□□□ -0.75
TNPO1-204ENST00000506351 ERBINQ96RT1 1412 aa10.36□□□□□ -0.75
TNPO1-204ENST00000506351 TRAPPC8Q9Y2L5 1435 aa10.35□□□□□ -0.75
TNPO1-204ENST00000506351 DEPDC5O75140 1603 aa10.35□□□□□ -0.75
TNPO1-204ENST00000506351 CFAP74Q9C0B2 1584 aa10.35□□□□□ -0.75
TNPO1-204ENST00000506351 ASXL2Q76L83 1435 aa10.34□□□□□ -0.75
TNPO1-204ENST00000506351 DDX10Q13206 875 aaKnown RBP10.34□□□□□ -0.75
TNPO1-204ENST00000506351 EFCAB2Q5VUJ9 269 aa10.34□□□□□ -0.75
TNPO1-204ENST00000506351 FANCAO15360 1455 aa10.33□□□□□ -0.76
TNPO1-204ENST00000506351 OSCARQ8IYS5 282 aa10.33□□□□□ -0.76
TNPO1-204ENST00000506351 ATP7AQ04656 1500 aa10.33□□□□□ -0.76
TNPO1-204ENST00000506351 KDM5CP41229 1560 aa10.32□□□□□ -0.76
TNPO1-204ENST00000506351 EIF2AK4Q9P2K8 1649 aaKnown RBP10.32□□□□□ -0.76
TNPO1-204ENST00000506351 HSPA5P11021 654 aaKnown RBP10.32□□□□□ -0.76
TNPO1-204ENST00000506351 NBPF8Q3BBV2 869 aa10.32□□□□□ -0.76
TNPO1-204ENST00000506351 RTEL1-TNFRSF6BF6WH68 1400 aa10.32□□□□□ -0.76
TNPO1-204ENST00000506351 E9PCH4 1651 aa10.32□□□□□ -0.76
TNPO1-204ENST00000506351 UHRF1BP1Q6BDS2 1440 aa10.31□□□□□ -0.76
TNPO1-204ENST00000506351 SPHKAPQ2M3C7 1700 aa10.31□□□□□ -0.76
TNPO1-204ENST00000506351 RALGAPBQ86X10 1494 aa10.3□□□□□ -0.76
TNPO1-204ENST00000506351 EIF4G2P78344 907 aaKnown RBP eCLIP10.3□□□□□ -0.76
TNPO1-204ENST00000506351 KIDINS220Q9ULH0 1771 aa10.3□□□□□ -0.76
TNPO1-204ENST00000506351 ADGRL1O94910 1474 aa10.3□□□□□ -0.76
TNPO1-204ENST00000506351 TRPM1Q7Z4N2 1603 aa10.3□□□□□ -0.76
TNPO1-204ENST00000506351 CEP152O94986 1710 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms