RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 WASHC2CQ9Y4E1 1318 aa18.06■□□□□ 0.48
LETM1-203ENST00000505551 SNAPC4Q5SXM2 1469 aa18.06■□□□□ 0.48
LETM1-203ENST00000505551 A0A0U1RQG5 324 aaPredicted RBP18.06■□□□□ 0.48
LETM1-203ENST00000505551 MAP3K1Q13233 1512 aa18.05■□□□□ 0.48
LETM1-203ENST00000505551 WDR62O43379 1518 aa18.05■□□□□ 0.48
LETM1-203ENST00000505551 FGD1P98174 961 aa18.04■□□□□ 0.48
LETM1-203ENST00000505551 USP35Q9P2H5 1018 aa18.02■□□□□ 0.48
LETM1-203ENST00000505551 ADAMTS12P58397 1594 aa18.02■□□□□ 0.47
LETM1-203ENST00000505551 CHIC2Q9UKJ5 165 aa18■□□□□ 0.47
LETM1-203ENST00000505551 SAMD9Q5K651 1589 aa18■□□□□ 0.47
LETM1-203ENST00000505551 CFAP43Q8NDM7 1665 aa17.99■□□□□ 0.47
LETM1-203ENST00000505551 IQGAP2Q13576 1575 aa17.98■□□□□ 0.47
LETM1-203ENST00000505551 TULP1O00294 542 aaPredicted RBP17.97■□□□□ 0.47
LETM1-203ENST00000505551 EIF4G3O43432 1585 aaKnown RBP17.96■□□□□ 0.47
LETM1-203ENST00000505551 ZBED9Q6R2W3 1325 aa17.95■□□□□ 0.46
LETM1-203ENST00000505551 FGD6Q6ZV73 1430 aa17.93■□□□□ 0.46
LETM1-203ENST00000505551 NCOA2Q15596 1464 aa17.93■□□□□ 0.46
LETM1-203ENST00000505551 CDK13Q14004 1512 aaKnown RBP17.93■□□□□ 0.46
LETM1-203ENST00000505551 LRRIQ1Q96JM4 1722 aa17.93■□□□□ 0.46
LETM1-203ENST00000505551 GRIN2AQ12879 1464 aa17.93■□□□□ 0.46
LETM1-203ENST00000505551 RRP7BPQ9NSQ0 103 aa17.92■□□□□ 0.46
LETM1-203ENST00000505551 THOC2Q8NI27 1593 aaKnown RBP17.91■□□□□ 0.46
LETM1-203ENST00000505551 NEFMP07197 916 aa17.91■□□□□ 0.46
LETM1-203ENST00000505551 MAGI3Q5TCQ9 1506 aa17.9■□□□□ 0.46
LETM1-203ENST00000505551 JPH4Q96JJ6 628 aa17.9■□□□□ 0.46
LETM1-203ENST00000505551 PTPRKQ15262 1439 aa17.9■□□□□ 0.46
LETM1-203ENST00000505551 KIAA0586Q9BVV6 1533 aa17.89■□□□□ 0.45
LETM1-203ENST00000505551 TONSLQ96HA7 1378 aa17.87■□□□□ 0.45
LETM1-203ENST00000505551 BRPF3Q9ULD4 1205 aa17.87■□□□□ 0.45
LETM1-203ENST00000505551 EPRSP07814 1512 aaKnown RBP17.87■□□□□ 0.45
LETM1-203ENST00000505551 RNF123Q5XPI4 1314 aa17.86■□□□□ 0.45
LETM1-203ENST00000505551 DISP1Q96F81 1524 aa17.86■□□□□ 0.45
LETM1-203ENST00000505551 CCDC184Q52MB2 194 aa17.85■□□□□ 0.45
LETM1-203ENST00000505551 MYOM3Q5VTT5 1437 aa17.85■□□□□ 0.45
LETM1-203ENST00000505551 ZNF644Q9H582 1327 aaPredicted RBP17.84■□□□□ 0.45
LETM1-203ENST00000505551 PPM1GO15355 546 aaPredicted RBP17.84■□□□□ 0.45
LETM1-203ENST00000505551 SMG6Q86US8 1419 aaKnown RBP17.84■□□□□ 0.45
LETM1-203ENST00000505551 KDM5BQ9UGL1 1544 aa17.83■□□□□ 0.44
LETM1-203ENST00000505551 CNTLNQ9NXG0 1405 aa17.83■□□□□ 0.44
LETM1-203ENST00000505551 LAS1LQ9Y4W2 734 aaKnown RBP17.83■□□□□ 0.44
LETM1-203ENST00000505551 SYNJ2O15056 1496 aa17.82■□□□□ 0.44
LETM1-203ENST00000505551 UGGT2Q9NYU1 1516 aa17.82■□□□□ 0.44
LETM1-203ENST00000505551 AAMPQ13685 434 aa17.82■□□□□ 0.44
LETM1-203ENST00000505551 ZNF777Q9ULD5 760 aaPredicted RBP17.81■□□□□ 0.44
LETM1-203ENST00000505551 ZMYND15Q9H091 742 aa17.81■□□□□ 0.44
LETM1-203ENST00000505551 MAGI1Q96QZ7 1491 aaPredicted RBP17.8■□□□□ 0.44
LETM1-203ENST00000505551 RSPH6AQ9H0K4 717 aa17.8■□□□□ 0.44
LETM1-203ENST00000505551 CEP170Q5SW79 1584 aa17.8■□□□□ 0.44
LETM1-203ENST00000505551 AKNAQ7Z591 1439 aa17.8■□□□□ 0.44
LETM1-203ENST00000505551 PLB1Q6P1J6 1458 aa17.8■□□□□ 0.44
LETM1-203ENST00000505551 TAF7LQ5H9L4 462 aa17.79■□□□□ 0.44
LETM1-203ENST00000505551 DHX37Q8IY37 1157 aaKnown RBP17.79■□□□□ 0.44
LETM1-203ENST00000505551 CCDC18Q5T9S5 1454 aa17.78■□□□□ 0.44
LETM1-203ENST00000505551 HECW1Q76N89 1606 aa17.78■□□□□ 0.44
LETM1-203ENST00000505551 GSE1Q14687 1217 aa17.78■□□□□ 0.44
LETM1-203ENST00000505551 EHBP1L1Q8N3D4 1523 aa17.78■□□□□ 0.44
LETM1-203ENST00000505551 SUPT6HQ7KZ85 1726 aaKnown RBP17.78■□□□□ 0.44
LETM1-203ENST00000505551 KIAA0556O60303 1618 aa17.78■□□□□ 0.44
LETM1-203ENST00000505551 FAM9BQ8IZU0 186 aa17.77■□□□□ 0.43
LETM1-203ENST00000505551 PRKRIP1Q9H875 184 aaPredicted RBP17.76■□□□□ 0.43
LETM1-203ENST00000505551 RBM10P98175 930 aaKnown RBP17.76■□□□□ 0.43
LETM1-203ENST00000505551 NUP153P49790 1475 aaKnown RBP17.76■□□□□ 0.43
LETM1-203ENST00000505551 PRG4Q92954 1404 aaPredicted RBP17.75■□□□□ 0.43
LETM1-203ENST00000505551 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.75■□□□□ 0.43
LETM1-203ENST00000505551 MRS2Q9HD23 443 aa17.74■□□□□ 0.43
LETM1-203ENST00000505551 FOXD1Q16676 465 aa17.73■□□□□ 0.43
LETM1-203ENST00000505551 HOMEZQ8IX15 550 aa17.73■□□□□ 0.43
LETM1-203ENST00000505551 PTPN23Q9H3S7 1636 aa17.73■□□□□ 0.43
LETM1-203ENST00000505551 NUDCQ9Y266 331 aa17.72■□□□□ 0.43
LETM1-203ENST00000505551 NPM2Q86SE8 214 aaKnown RBP17.72■□□□□ 0.43
LETM1-203ENST00000505551 NAIPQ13075 1403 aa17.72■□□□□ 0.43
LETM1-203ENST00000505551 TCERG1O14776 1098 aaKnown RBP17.71■□□□□ 0.43
LETM1-203ENST00000505551 HSPA5P11021 654 aaKnown RBP17.71■□□□□ 0.43
LETM1-203ENST00000505551 FAM43AQ8N2R8 423 aa17.71■□□□□ 0.42
LETM1-203ENST00000505551 CARMIL2Q6F5E8 1435 aa17.7■□□□□ 0.42
LETM1-203ENST00000505551 CHMP4AQ9BY43 222 aa17.7■□□□□ 0.42
LETM1-203ENST00000505551 CFDP1Q9UEE9 299 aaPredicted RBP17.7■□□□□ 0.42
LETM1-203ENST00000505551 HFM1A2PYH4 1435 aa17.69■□□□□ 0.42
LETM1-203ENST00000505551 UACAQ9BZF9 1416 aa17.69■□□□□ 0.42
LETM1-203ENST00000505551 NUP160Q12769 1436 aa17.69■□□□□ 0.42
LETM1-203ENST00000505551 ARHGEF11O15085 1522 aa17.67■□□□□ 0.42
LETM1-203ENST00000505551 PDE4AP27815 886 aa17.67■□□□□ 0.42
LETM1-203ENST00000505551 VSIG10Q8N0Z9 540 aa17.67■□□□□ 0.42
LETM1-203ENST00000505551 BACH2Q9BYV9 841 aa17.67■□□□□ 0.42
LETM1-203ENST00000505551 RAPGEF6Q8TEU7 1601 aa17.67■□□□□ 0.42
LETM1-203ENST00000505551 PLEKHD1A6NEE1 506 aa17.66■□□□□ 0.42
LETM1-203ENST00000505551 NCOA1Q15788 1441 aa17.66■□□□□ 0.42
LETM1-203ENST00000505551 FRAT1Q92837 279 aaPredicted RBP17.66■□□□□ 0.42
LETM1-203ENST00000505551 MS4A1P11836 297 aa17.65■□□□□ 0.42
LETM1-203ENST00000505551 CCDC7Q96M83 1385 aa17.64■□□□□ 0.41
LETM1-203ENST00000505551 NFKBIBQ15653 356 aa17.63■□□□□ 0.41
LETM1-203ENST00000505551 PAXIP1Q6ZW49 1069 aaPredicted RBP17.63■□□□□ 0.41
LETM1-203ENST00000505551 GLIPR1L2Q4G1C9 344 aa17.62■□□□□ 0.41
LETM1-203ENST00000505551 HAP1P54257 671 aaPredicted RBP17.62■□□□□ 0.41
LETM1-203ENST00000505551 EIF4G2P78344 907 aaKnown RBP eCLIP17.62■□□□□ 0.41
LETM1-203ENST00000505551 DDRGK1Q96HY6 314 aa17.62■□□□□ 0.41
LETM1-203ENST00000505551 PTPRGP23470 1445 aa17.6■□□□□ 0.41
LETM1-203ENST00000505551 MPHOSPH9Q99550 1183 aa17.6■□□□□ 0.41
LETM1-203ENST00000505551 POLR1AO95602 1720 aaPredicted RBP17.59■□□□□ 0.41
LETM1-203ENST00000505551 KDM6BO15054 1643 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms