RNA–Protein interactions for RNA: ENST00000505138.1

PHF3-207, Transcript of PHD finger protein 3, humanhuman

TSL 3

Gene PHF3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-207ENST00000505138 SLAIN1Q8ND83 568 aa8.66□□□□□ -1.02
PHF3-207ENST00000505138 ST18O60284 1047 aa8.65□□□□□ -1.02
PHF3-207ENST00000505138 COLQQ9Y215 455 aaPredicted RBP8.65□□□□□ -1.02
PHF3-207ENST00000505138 PCDHB13Q9Y5F0 798 aa8.64□□□□□ -1.03
PHF3-207ENST00000505138 MMRN1Q13201 1228 aa8.63□□□□□ -1.03
PHF3-207ENST00000505138 ARXQ96QS3 562 aa8.63□□□□□ -1.03
PHF3-207ENST00000505138 TRIM35Q9UPQ4 493 aa8.63□□□□□ -1.03
PHF3-207ENST00000505138 LMOD2Q6P5Q4 547 aa8.61□□□□□ -1.03
PHF3-207ENST00000505138 ZNF467Q7Z7K2 595 aaPredicted RBP8.61□□□□□ -1.03
PHF3-207ENST00000505138 KCNV2Q8TDN2 545 aa8.61□□□□□ -1.03
PHF3-207ENST00000505138 TRPC6Q9Y210 931 aa8.61□□□□□ -1.03
PHF3-207ENST00000505138 CADPS2Q86UW7 1296 aa8.6□□□□□ -1.03
PHF3-207ENST00000505138 SPNS2Q8IVW8 549 aa8.6□□□□□ -1.03
PHF3-207ENST00000505138 CC2D2AQ9P2K1 1620 aa8.59□□□□□ -1.03
PHF3-207ENST00000505138 PLCG2P16885 1265 aa8.59□□□□□ -1.03
PHF3-207ENST00000505138 SHROOM4Q9ULL8 1493 aa8.57□□□□□ -1.04
PHF3-207ENST00000505138 EIF4G1Q04637 1599 aaKnown RBP8.57□□□□□ -1.04
PHF3-207ENST00000505138 PDAP1Q13442 181 aaKnown RBP8.57□□□□□ -1.04
PHF3-207ENST00000505138 ARHGEF1Q92888 912 aaKnown RBP8.56□□□□□ -1.04
PHF3-207ENST00000505138 IFNL1Q8IU54 200 aa8.53□□□□□ -1.04
PHF3-207ENST00000505138 C14orf37Q86TY3 774 aa8.52□□□□□ -1.05
PHF3-207ENST00000505138 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.52□□□□□ -1.05
PHF3-207ENST00000505138 MFRPQ9BY79 579 aa8.51□□□□□ -1.05
PHF3-207ENST00000505138 OCEL1Q9H607 264 aa8.51□□□□□ -1.05
PHF3-207ENST00000505138 BRPF1P55201 1214 aaPredicted RBP8.5□□□□□ -1.05
PHF3-207ENST00000505138 IRX5P78411 483 aaPredicted RBP8.5□□□□□ -1.05
PHF3-207ENST00000505138 ZC3H15Q8WU90 426 aaKnown RBP8.5□□□□□ -1.05
PHF3-207ENST00000505138 TMEM106CQ9BVX2 250 aa8.5□□□□□ -1.05
PHF3-207ENST00000505138 PSEN1P49768 467 aa8.49□□□□□ -1.05
PHF3-207ENST00000505138 GOLGA2Q08379 1002 aa8.49□□□□□ -1.05
PHF3-207ENST00000505138 E2F4Q16254 413 aa8.49□□□□□ -1.05
PHF3-207ENST00000505138 PCDHB8Q9UN66 801 aa8.49□□□□□ -1.05
PHF3-207ENST00000505138 TESPA1A2RU30 521 aaPredicted RBP8.46□□□□□ -1.06
PHF3-207ENST00000505138 CECR2Q9BXF3 1484 aa8.45□□□□□ -1.06
PHF3-207ENST00000505138 SOX12O15370 315 aa8.45□□□□□ -1.06
PHF3-207ENST00000505138 NLRP6P59044 892 aa8.45□□□□□ -1.06
PHF3-207ENST00000505138 PPP1R37O75864 691 aa8.44□□□□□ -1.06
PHF3-207ENST00000505138 SEMA3EO15041 775 aa8.43□□□□□ -1.06
PHF3-207ENST00000505138 NEUROD2Q15784 382 aa8.42□□□□□ -1.06
PHF3-207ENST00000505138 SMYD5Q6GMV2 418 aa8.42□□□□□ -1.06
PHF3-207ENST00000505138 HOMEZQ8IX15 550 aa8.42□□□□□ -1.06
PHF3-207ENST00000505138 FBXO22Q8NEZ5 403 aa8.42□□□□□ -1.06
PHF3-207ENST00000505138 DAXXQ9UER7 740 aaPredicted RBP8.42□□□□□ -1.06
PHF3-207ENST00000505138 EMP3P54852 163 aa8.41□□□□□ -1.06
PHF3-207ENST00000505138 MKRN3Q13064 507 aaKnown RBP8.41□□□□□ -1.06
PHF3-207ENST00000505138 SLC24A3Q9HC58 644 aa8.41□□□□□ -1.06
PHF3-207ENST00000505138 EFCAB3Q8N7B9 438 aa8.4□□□□□ -1.06
PHF3-207ENST00000505138 L3MBTL3Q96JM7 780 aaPredicted RBP8.4□□□□□ -1.06
PHF3-207ENST00000505138 ZMYND10O75800 440 aa8.39□□□□□ -1.07
PHF3-207ENST00000505138 PDE4AP27815 886 aa8.39□□□□□ -1.07
PHF3-207ENST00000505138 C3orf67Q6ZVT6 689 aa8.39□□□□□ -1.07
PHF3-207ENST00000505138 MARVELD3Q96A59 401 aa8.39□□□□□ -1.07
PHF3-207ENST00000505138 ARIH1Q9Y4X5 557 aaPredicted RBP8.38□□□□□ -1.07
PHF3-207ENST00000505138 PHF8Q9UPP1 1060 aa8.37□□□□□ -1.07
PHF3-207ENST00000505138 LARP6Q9BRS8 491 aaKnown RBP8.36□□□□□ -1.07
PHF3-207ENST00000505138 CABP2Q9NPB3 220 aa8.36□□□□□ -1.07
PHF3-207ENST00000505138 NCKAP5LQ9HCH0 1330 aa8.34□□□□□ -1.07
PHF3-207ENST00000505138 MFSD10Q14728 455 aa8.34□□□□□ -1.07
PHF3-207ENST00000505138 BARGINQ6ZT62 677 aa8.34□□□□□ -1.07
PHF3-207ENST00000505138 HS3ST6Q96QI5 342 aa8.33□□□□□ -1.08
PHF3-207ENST00000505138 G3V3G9 751 aa8.31□□□□□ -1.08
PHF3-207ENST00000505138 KRTAP3-3Q9BYR6 98 aa8.31□□□□□ -1.08
PHF3-207ENST00000505138 KRTAP3-2Q9BYR7 98 aa8.31□□□□□ -1.08
PHF3-207ENST00000505138 SMARCA4P51532 1647 aa8.31□□□□□ -1.08
PHF3-207ENST00000505138 CAMK2BQ13554 666 aa8.3□□□□□ -1.08
PHF3-207ENST00000505138 AK7Q96M32 723 aa8.3□□□□□ -1.08
PHF3-207ENST00000505138 CRISPLD2Q9H0B8 497 aa8.3□□□□□ -1.08
PHF3-207ENST00000505138 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.3□□□□□ -1.084e-9■■■□□ 19.2
PHF3-207ENST00000505138 FAM205CA6NFA0 338 aa8.29□□□□□ -1.08
PHF3-207ENST00000505138 DDX27Q96GQ7 796 aaKnown RBP8.29□□□□□ -1.08
PHF3-207ENST00000505138 SUPT5HO00267 1087 aaKnown RBP8.27□□□□□ -1.09
PHF3-207ENST00000505138 PDCD7Q8N8D1 485 aaKnown RBP8.27□□□□□ -1.09
PHF3-207ENST00000505138 MS4A4AQ96JQ5 239 aa8.26□□□□□ -1.09
PHF3-207ENST00000505138 ATAD2BQ9ULI0 1458 aa8.25□□□□□ -1.09
PHF3-207ENST00000505138 PEG3Q9GZU2 1588 aa8.24□□□□□ -1.09
PHF3-207ENST00000505138 KRI1Q8N9T8 703 aaKnown RBP8.24□□□□□ -1.09
PHF3-207ENST00000505138 NCAPD3P42695 1498 aa8.24□□□□□ -1.09
PHF3-207ENST00000505138 HMGXB3Q12766 1538 aa8.23□□□□□ -1.09
PHF3-207ENST00000505138 PTGER2P43116 358 aa8.22□□□□□ -1.09
PHF3-207ENST00000505138 RNF166Q96A37 237 aaPredicted RBP8.22□□□□□ -1.09
PHF3-207ENST00000505138 MROH2BQ7Z745 1585 aa8.22□□□□□ -1.09
PHF3-207ENST00000505138 RBM26Q5T8P6 1007 aaKnown RBP8.21□□□□□ -1.1
PHF3-207ENST00000505138 POTEB3A0JP26 581 aa8.2□□□□□ -1.1
PHF3-207ENST00000505138 POTEBQ6S5H4 581 aa8.2□□□□□ -1.1
PHF3-207ENST00000505138 GPIHBP1Q8IV16 184 aa8.2□□□□□ -1.1
PHF3-207ENST00000505138 NESP48681 1621 aa8.2□□□□□ -1.1
PHF3-207ENST00000505138 HOXB1P14653 301 aaPredicted RBP8.19□□□□□ -1.1
PHF3-207ENST00000505138 MLLT3P42568 568 aaPredicted RBP8.19□□□□□ -1.1
PHF3-207ENST00000505138 DOK7Q18PE1 504 aa8.19□□□□□ -1.1
PHF3-207ENST00000505138 ZNF710Q8N1W2 664 aa8.19□□□□□ -1.1
PHF3-207ENST00000505138 IL27Q8NEV9 243 aa8.19□□□□□ -1.1
PHF3-207ENST00000505138 ZMYND15Q9H091 742 aa8.19□□□□□ -1.1
PHF3-207ENST00000505138 RIMBP2O15034 1052 aa8.18□□□□□ -1.1
PHF3-207ENST00000505138 GPBP1L1Q9HC44 474 aaPredicted RBP8.18□□□□□ -1.1
PHF3-207ENST00000505138 GPHNQ9NQX3 736 aaPredicted RBP8.18□□□□□ -1.1
PHF3-207ENST00000505138 THOC2Q8NI27 1593 aaKnown RBP8.18□□□□□ -1.1
PHF3-207ENST00000505138 SPDYE16A6NNV3 312 aaPredicted RBP8.17□□□□□ -1.1
PHF3-207ENST00000505138 TRIM66O15016 1216 aa8.17□□□□□ -1.1
PHF3-207ENST00000505138 ILDR1Q86SU0 546 aaPredicted RBP8.17□□□□□ -1.1
PHF3-207ENST00000505138 KDM4CQ9H3R0 1056 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms