RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 ATP10BO94823 1461 aa14.44□□□□□ -0.1
TPM3-218ENST00000505010 NEO1Q92859 1461 aa14.44□□□□□ -0.1
TPM3-218ENST00000505010 KANK4Q5T7N3 995 aaPredicted RBP14.43□□□□□ -0.1
TPM3-218ENST00000505010 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.42□□□□□ -0.1
TPM3-218ENST00000505010 HNRNPUL2Q1KMD3 747 aaKnown RBP14.42□□□□□ -0.1
TPM3-218ENST00000505010 ABCA9Q8IUA7 1624 aa14.41□□□□□ -0.1
TPM3-218ENST00000505010 SUPT6HQ7KZ85 1726 aaKnown RBP14.41□□□□□ -0.1
TPM3-218ENST00000505010 TRIM26Q12899 539 aaPredicted RBP14.4□□□□□ -0.1
TPM3-218ENST00000505010 MTUS2Q5JR59 1369 aa14.39□□□□□ -0.11
TPM3-218ENST00000505010 RIMS1Q86UR5 1692 aaKnown RBP14.39□□□□□ -0.11
TPM3-218ENST00000505010 POGZQ7Z3K3 1410 aa14.38□□□□□ -0.11
TPM3-218ENST00000505010 FRMPD1Q5SYB0 1578 aa14.36□□□□□ -0.11
TPM3-218ENST00000505010 PCGF6Q9BYE7 350 aa14.35□□□□□ -0.11
TPM3-218ENST00000505010 DENND4BO75064 1496 aaPredicted RBP14.35□□□□□ -0.11
TPM3-218ENST00000505010 MLECQ14165 292 aa14.34□□□□□ -0.11
TPM3-218ENST00000505010 FANCAO15360 1455 aa14.33□□□□□ -0.12
TPM3-218ENST00000505010 NCOA2Q15596 1464 aa14.33□□□□□ -0.12
TPM3-218ENST00000505010 DMRT2Q9Y5R5 561 aa14.33□□□□□ -0.12
TPM3-218ENST00000505010 AKNAQ7Z591 1439 aa14.32□□□□□ -0.12
TPM3-218ENST00000505010 ARHGEF40Q8TER5 1519 aa14.32□□□□□ -0.12
TPM3-218ENST00000505010 KIF14Q15058 1648 aa14.32□□□□□ -0.12
TPM3-218ENST00000505010 PLEKHD1A6NEE1 506 aa14.31□□□□□ -0.12
TPM3-218ENST00000505010 CDK11AQ9UQ88 783 aaPredicted RBP14.31□□□□□ -0.12
TPM3-218ENST00000505010 TROQ12816 1431 aaPredicted RBP14.31□□□□□ -0.12
TPM3-218ENST00000505010 ITSN2Q9NZM3 1697 aa14.29□□□□□ -0.12
TPM3-218ENST00000505010 RICTORQ6R327 1708 aa14.27□□□□□ -0.12
TPM3-218ENST00000505010 RRBP1Q9P2E9 1410 aaKnown RBP14.27□□□□□ -0.12
TPM3-218ENST00000505010 YEATS2Q9ULM3 1422 aa14.27□□□□□ -0.12
TPM3-218ENST00000505010 ZFYVE16Q7Z3T8 1539 aa14.25□□□□□ -0.13
TPM3-218ENST00000505010 MAGI2Q86UL8 1455 aa14.25□□□□□ -0.13
TPM3-218ENST00000505010 MYOM3Q5VTT5 1437 aa14.25□□□□□ -0.13
TPM3-218ENST00000505010 CDC42BPAQ5VT25 1732 aa14.24□□□□□ -0.13
TPM3-218ENST00000505010 CCNB3Q8WWL7 1395 aa14.24□□□□□ -0.13
TPM3-218ENST00000505010 CEBPAP49715 358 aaPredicted RBP14.24□□□□□ -0.13
TPM3-218ENST00000505010 FGD6Q6ZV73 1430 aa14.24□□□□□ -0.13
TPM3-218ENST00000505010 PTPN23Q9H3S7 1636 aa14.23□□□□□ -0.13
TPM3-218ENST00000505010 ZMYM4Q5VZL5 1548 aa14.23□□□□□ -0.13
TPM3-218ENST00000505010 TTC37Q6PGP7 1564 aa14.22□□□□□ -0.13
TPM3-218ENST00000505010 CFAP74Q9C0B2 1584 aa14.22□□□□□ -0.13
TPM3-218ENST00000505010 FER1L4A9Z1Z3 1794 aa14.22□□□□□ -0.13
TPM3-218ENST00000505010 SPATA31D1Q6ZQQ2 1576 aa14.22□□□□□ -0.13
TPM3-218ENST00000505010 MYO5CQ9NQX4 1742 aa14.21□□□□□ -0.13
TPM3-218ENST00000505010 SIGLEC1Q9BZZ2 1709 aa14.21□□□□□ -0.14
TPM3-218ENST00000505010 PREX1Q8TCU6 1659 aa14.2□□□□□ -0.14
TPM3-218ENST00000505010 PREX2Q70Z35 1606 aa14.19□□□□□ -0.14
TPM3-218ENST00000505010 SCAPERQ9BY12 1400 aa14.19□□□□□ -0.14
TPM3-218ENST00000505010 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.19□□□□□ -0.143e-7■□□□□ 8.5
TPM3-218ENST00000505010 ATP10AO60312 1499 aa14.18□□□□□ -0.14
TPM3-218ENST00000505010 UHRF1BP1Q6BDS2 1440 aa14.18□□□□□ -0.14
TPM3-218ENST00000505010 STRCQ7RTU9 1775 aa14.17□□□□□ -0.14
TPM3-218ENST00000505010 ARHGEF12Q9NZN5 1544 aa14.17□□□□□ -0.14
TPM3-218ENST00000505010 FAM50AQ14320 339 aaKnown RBP14.17□□□□□ -0.14
TPM3-218ENST00000505010 CDC42BPBQ9Y5S2 1711 aa14.17□□□□□ -0.14
TPM3-218ENST00000505010 MIA2Q96PC5 1412 aa14.16□□□□□ -0.14
TPM3-218ENST00000505010 TCOF1Q13428 1488 aaKnown RBP14.16□□□□□ -0.14
TPM3-218ENST00000505010 PTPRTO14522 1441 aa14.15□□□□□ -0.14
TPM3-218ENST00000505010 C9orf84Q5VXU9 1444 aa14.15□□□□□ -0.14
TPM3-218ENST00000505010 GPATCH8Q9UKJ3 1502 aaKnown RBP14.15□□□□□ -0.14
TPM3-218ENST00000505010 SETD1BQ9UPS6 1966 aaKnown RBP14.15□□□□□ -0.14
TPM3-218ENST00000505010 EFCAB2Q5VUJ9 269 aa14.14□□□□□ -0.15
TPM3-218ENST00000505010 PLCH2O75038 1416 aa14.14□□□□□ -0.15
TPM3-218ENST00000505010 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.13□□□□□ -0.151e-7■■□□□ 12.2
TPM3-218ENST00000505010 MYT1LQ9UL68 1186 aa14.13□□□□□ -0.15
TPM3-218ENST00000505010 CAMSAP2Q08AD1 1489 aa14.12□□□□□ -0.15
TPM3-218ENST00000505010 ITGAEP38570 1179 aa14.12□□□□□ -0.15
TPM3-218ENST00000505010 ARHGAP5Q13017 1502 aa14.11□□□□□ -0.15
TPM3-218ENST00000505010 ESF1Q9H501 851 aaKnown RBP14.11□□□□□ -0.15
TPM3-218ENST00000505010 DNMT1P26358 1616 aaKnown RBP14.11□□□□□ -0.15
TPM3-218ENST00000505010 CROCC2H7BZ55 1655 aa14.1□□□□□ -0.15
TPM3-218ENST00000505010 IQSEC2Q5JU85 1478 aa14.1□□□□□ -0.15
TPM3-218ENST00000505010 SAMD9LQ8IVG5 1584 aa14.09□□□□□ -0.15
TPM3-218ENST00000505010 CFDP1Q9UEE9 299 aaPredicted RBP14.09□□□□□ -0.15
TPM3-218ENST00000505010 LTBP4Q8N2S1 1624 aa14.08□□□□□ -0.15
TPM3-218ENST00000505010 AFAP1Q8N556 730 aa14.08□□□□□ -0.16
TPM3-218ENST00000505010 ADGBQ8N7X0 1667 aa14.07□□□□□ -0.16
TPM3-218ENST00000505010 UBAP1LF5GYI3 381 aa14.06□□□□□ -0.16
TPM3-218ENST00000505010 ZNF777Q9ULD5 760 aaPredicted RBP14.06□□□□□ -0.16
TPM3-218ENST00000505010 TRAPPC8Q9Y2L5 1435 aa14.06□□□□□ -0.16
TPM3-218ENST00000505010 ZNF518AQ6AHZ1 1483 aa14.06□□□□□ -0.16
TPM3-218ENST00000505010 ZNF644Q9H582 1327 aaPredicted RBP14.05□□□□□ -0.16
TPM3-218ENST00000505010 DAPK1P53355 1430 aa14.04□□□□□ -0.16
TPM3-218ENST00000505010 GCC2Q8IWJ2 1684 aa14.04□□□□□ -0.16
TPM3-218ENST00000505010 NCOA1Q15788 1441 aa14.03□□□□□ -0.16
TPM3-218ENST00000505010 SYCP2Q9BX26 1530 aa14.03□□□□□ -0.16
TPM3-218ENST00000505010 ARHGEF5Q12774 1597 aa14.03□□□□□ -0.16
TPM3-218ENST00000505010 ABCC1P33527 1531 aa14.02□□□□□ -0.16
TPM3-218ENST00000505010 PTPRKQ15262 1439 aa14.02□□□□□ -0.16
TPM3-218ENST00000505010 C3P01024 1663 aa14.01□□□□□ -0.17
TPM3-218ENST00000505010 PLEKHH2Q8IVE3 1493 aa14□□□□□ -0.17
TPM3-218ENST00000505010 ABCC5O15440 1437 aa14□□□□□ -0.17
TPM3-218ENST00000505010 ZNF335Q9H4Z2 1342 aaPredicted RBP13.99□□□□□ -0.17
TPM3-218ENST00000505010 NCKAP5LQ9HCH0 1330 aa13.99□□□□□ -0.17
TPM3-218ENST00000505010 KDM5CP41229 1560 aa13.99□□□□□ -0.17
TPM3-218ENST00000505010 CCDC141Q6ZP82 1450 aa13.99□□□□□ -0.17
TPM3-218ENST00000505010 SHANK2Q9UPX8 1470 aa13.99□□□□□ -0.17
TPM3-218ENST00000505010 REREQ9P2R6 1566 aa13.98□□□□□ -0.17
TPM3-218ENST00000505010 DIP2CQ9Y2E4 1556 aa13.98□□□□□ -0.17
TPM3-218ENST00000505010 CNTLNQ9NXG0 1405 aa13.98□□□□□ -0.17
TPM3-218ENST00000505010 MLH3Q9UHC1 1453 aa13.97□□□□□ -0.17
TPM3-218ENST00000505010 SETD5Q9C0A6 1442 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms