RNA–Protein interactions for RNA: ENST00000504927.5

DDR1-255, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-255ENST00000504927 ARHGAP5Q13017 1502 aa32.54■■■□□ 2.8
DDR1-255ENST00000504927 MAP3K1Q13233 1512 aa32.54■■■□□ 2.8
DDR1-255ENST00000504927 EHBP1L1Q8N3D4 1523 aa32.54■■■□□ 2.8
DDR1-255ENST00000504927 ADGRL1O94910 1474 aa32.52■■■□□ 2.8
DDR1-255ENST00000504927 TIAM1Q13009 1591 aa32.52■■■□□ 2.8
DDR1-255ENST00000504927 CCNB3Q8WWL7 1395 aa32.51■■■□□ 2.79
DDR1-255ENST00000504927 CDC42BPBQ9Y5S2 1711 aa32.51■■■□□ 2.79
DDR1-255ENST00000504927 SCAPERQ9BY12 1400 aa32.51■■■□□ 2.79
DDR1-255ENST00000504927 PREX2Q70Z35 1606 aa32.49■■■□□ 2.79
DDR1-255ENST00000504927 GPATCH8Q9UKJ3 1502 aaKnown RBP32.48■■■□□ 2.79
DDR1-255ENST00000504927 CDC42BPAQ5VT25 1732 aa32.46■■■□□ 2.79
DDR1-255ENST00000504927 CFDP1Q9UEE9 299 aaPredicted RBP32.46■■■□□ 2.79
DDR1-255ENST00000504927 LRRC9Q6ZRR7 1453 aa32.45■■■□□ 2.79
DDR1-255ENST00000504927 POGZQ7Z3K3 1410 aa32.43■■■□□ 2.78
DDR1-255ENST00000504927 ZMYM4Q5VZL5 1548 aa32.43■■■□□ 2.78
DDR1-255ENST00000504927 ARHGEF40Q8TER5 1519 aa32.41■■■□□ 2.78
DDR1-255ENST00000504927 KANK4Q5T7N3 995 aaPredicted RBP32.41■■■□□ 2.78
DDR1-255ENST00000504927 ZNF777Q9ULD5 760 aaPredicted RBP32.4■■■□□ 2.78
DDR1-255ENST00000504927 NCOA2Q15596 1464 aa32.37■■■□□ 2.77
DDR1-255ENST00000504927 SUPT6HQ7KZ85 1726 aaKnown RBP32.36■■■□□ 2.77
DDR1-255ENST00000504927 MAGI2Q86UL8 1455 aa32.35■■■□□ 2.77
DDR1-255ENST00000504927 YEATS2Q9ULM3 1422 aa32.34■■■□□ 2.77
DDR1-255ENST00000504927 AFAP1Q8N556 730 aa32.34■■■□□ 2.77
DDR1-255ENST00000504927 ABCC1P33527 1531 aa32.34■■■□□ 2.77
DDR1-255ENST00000504927 ZNF518AQ6AHZ1 1483 aa32.34■■■□□ 2.77
DDR1-255ENST00000504927 ZFYVE16Q7Z3T8 1539 aa32.32■■■□□ 2.76
DDR1-255ENST00000504927 ARHGEF12Q9NZN5 1544 aa32.32■■■□□ 2.76
DDR1-255ENST00000504927 PLEKHH2Q8IVE3 1493 aa32.3■■■□□ 2.76
DDR1-255ENST00000504927 KIAA1107Q9UPP5 1409 aa32.3■■■□□ 2.76
DDR1-255ENST00000504927 SIGLEC1Q9BZZ2 1709 aa32.29■■■□□ 2.76
DDR1-255ENST00000504927 KDM5CP41229 1560 aa32.28■■■□□ 2.76
DDR1-255ENST00000504927 SAMD9LQ8IVG5 1584 aa32.28■■■□□ 2.76
DDR1-255ENST00000504927 ITSN2Q9NZM3 1697 aa32.28■■■□□ 2.76
DDR1-255ENST00000504927 HNRNPMP52272 730 aaKnown RBP eCLIP32.26■■■□□ 2.75
DDR1-255ENST00000504927 TRAPPC8Q9Y2L5 1435 aa32.25■■■□□ 2.75
DDR1-255ENST00000504927 MYT1LQ9UL68 1186 aa32.23■■■□□ 2.75
DDR1-255ENST00000504927 ZNF644Q9H582 1327 aaPredicted RBP32.22■■■□□ 2.75
DDR1-255ENST00000504927 SYCP2Q9BX26 1530 aa32.2■■■□□ 2.74
DDR1-255ENST00000504927 ADAMTSL3P82987 1691 aa32.19■■■□□ 2.74
DDR1-255ENST00000504927 MLH3Q9UHC1 1453 aa32.19■■■□□ 2.74
DDR1-255ENST00000504927 BCORL1Q5H9F3 1711 aa32.19■■■□□ 2.74
DDR1-255ENST00000504927 HECW2Q9P2P5 1572 aa32.19■■■□□ 2.74
DDR1-255ENST00000504927 RSPH4AQ5TD94 716 aa32.18■■■□□ 2.74
DDR1-255ENST00000504927 ARID4BQ4LE39 1312 aaPredicted RBP32.17■■■□□ 2.74
DDR1-255ENST00000504927 ATP10AO60312 1499 aa32.16■■■□□ 2.74
DDR1-255ENST00000504927 SPAG9O60271 1321 aaKnown RBP32.14■■■□□ 2.74
DDR1-255ENST00000504927 MYOM3Q5VTT5 1437 aa32.14■■■□□ 2.74
DDR1-255ENST00000504927 MIA2Q96PC5 1412 aa32.14■■■□□ 2.74
DDR1-255ENST00000504927 ABCA6Q8N139 1617 aa32.13■■■□□ 2.73
DDR1-255ENST00000504927 DIP2CQ9Y2E4 1556 aa32.13■■■□□ 2.73
DDR1-255ENST00000504927 MADDQ8WXG6 1647 aa32.11■■■□□ 2.73
DDR1-255ENST00000504927 MBD5Q9P267 1494 aa32.11■■■□□ 2.73
DDR1-255ENST00000504927 C9orf84Q5VXU9 1444 aa32.09■■■□□ 2.73
DDR1-255ENST00000504927 KIDINS220Q9ULH0 1771 aa32.09■■■□□ 2.73
DDR1-255ENST00000504927 CAMSAP2Q08AD1 1489 aa32.08■■■□□ 2.73
DDR1-255ENST00000504927 PTPRMP28827 1452 aa32.02■■■□□ 2.72
DDR1-255ENST00000504927 TSPY4P0CV99 314 aa32.01■■■□□ 2.71
DDR1-255ENST00000504927 TSPY10P0CW01 314 aa32.01■■■□□ 2.71
DDR1-255ENST00000504927 REREQ9P2R6 1566 aa32■■■□□ 2.71
DDR1-255ENST00000504927 RTEL1-TNFRSF6BF6WH68 1400 aa32■■■□□ 2.71
DDR1-255ENST00000504927 RIMS1Q86UR5 1692 aaKnown RBP31.99■■■□□ 2.71
DDR1-255ENST00000504927 INO80Q9ULG1 1556 aaPredicted RBP31.99■■■□□ 2.71
DDR1-255ENST00000504927 CCDC141Q6ZP82 1450 aa31.99■■■□□ 2.71
DDR1-255ENST00000504927 MLECQ14165 292 aa31.97■■■□□ 2.71
DDR1-255ENST00000504927 ATP7AQ04656 1500 aa31.96■■■□□ 2.71
DDR1-255ENST00000504927 ARHGEF5Q12774 1597 aa31.95■■■□□ 2.71
DDR1-255ENST00000504927 FGD6Q6ZV73 1430 aa31.94■■■□□ 2.7
DDR1-255ENST00000504927 FER1L4A9Z1Z3 1794 aa31.92■■■□□ 2.7
DDR1-255ENST00000504927 AGLP35573 1532 aa31.89■■■□□ 2.7
DDR1-255ENST00000504927 PTPN23Q9H3S7 1636 aa31.87■■■□□ 2.69
DDR1-255ENST00000504927 TCOF1Q13428 1488 aaKnown RBP31.86■■■□□ 2.69
DDR1-255ENST00000504927 A2MP01023 1474 aa31.85■■■□□ 2.69
DDR1-255ENST00000504927 PPARGC1BQ86YN6 1023 aaKnown RBP31.84■■■□□ 2.69
DDR1-255ENST00000504927 PLXNC1O60486 1568 aa31.84■■■□□ 2.69
DDR1-255ENST00000504927 DHX29Q7Z478 1369 aaKnown RBP31.81■■■□□ 2.68
DDR1-255ENST00000504927 FAM50AQ14320 339 aaKnown RBP31.79■■■□□ 2.68
DDR1-255ENST00000504927 ABCC5O15440 1437 aa31.78■■■□□ 2.68
DDR1-255ENST00000504927 ADGBQ8N7X0 1667 aa31.77■■■□□ 2.68
DDR1-255ENST00000504927 ESF1Q9H501 851 aaKnown RBP31.77■■■□□ 2.68
DDR1-255ENST00000504927 MAST1Q9Y2H9 1570 aa31.77■■■□□ 2.68
DDR1-255ENST00000504927 PLPPR3Q6T4P5 718 aa31.76■■■□□ 2.67
DDR1-255ENST00000504927 PPP6R1Q9UPN7 881 aa31.74■■■□□ 2.67
DDR1-255ENST00000504927 DAPK1P53355 1430 aa31.74■■■□□ 2.67
DDR1-255ENST00000504927 SHANK2Q9UPX8 1470 aa31.72■■■□□ 2.67
DDR1-255ENST00000504927 GGT6Q6P531 493 aa31.69■■■□□ 2.66
DDR1-255ENST00000504927 DNMT1P26358 1616 aaKnown RBP31.68■■■□□ 2.66
DDR1-255ENST00000504927 KIF3BO15066 747 aa31.68■■■□□ 2.66
DDR1-255ENST00000504927 CEBPAP49715 358 aaPredicted RBP31.67■■■□□ 2.66
DDR1-255ENST00000504927 LMTK3Q96Q04 1460 aa31.66■■■□□ 2.66
DDR1-255ENST00000504927 CNTLNQ9NXG0 1405 aa31.66■■■□□ 2.66
DDR1-255ENST00000504927 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.65■■■□□ 2.66
DDR1-255ENST00000504927 C3P01024 1663 aa31.64■■■□□ 2.66
DDR1-255ENST00000504927 CHIC2Q9UKJ5 165 aa31.64■■■□□ 2.66
DDR1-255ENST00000504927 RRP7BPQ9NSQ0 103 aa31.63■■■□□ 2.65
DDR1-255ENST00000504927 ANKRD30AQ9BXX3 1397 aa31.63■■■□□ 2.65
DDR1-255ENST00000504927 CROCC2H7BZ55 1655 aa31.61■■■□□ 2.65
DDR1-255ENST00000504927 KIF15Q9NS87 1388 aa31.6■■■□□ 2.65
DDR1-255ENST00000504927 DUOX2Q9NRD8 1548 aa31.59■■■□□ 2.65
DDR1-255ENST00000504927 NCOA1Q15788 1441 aa31.58■■■□□ 2.65
DDR1-255ENST00000504927 CLTCQ00610 1675 aaKnown RBP31.57■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms