RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 ATP10BO94823 1461 aa13.21□□□□□ -0.3
RFC1-207ENST00000504554 WDR7Q9Y4E6 1490 aa13.2□□□□□ -0.3
RFC1-207ENST00000504554 PPRC1Q5VV67 1664 aaKnown RBP13.18□□□□□ -0.3
RFC1-207ENST00000504554 NUP153P49790 1475 aaKnown RBP13.17□□□□□ -0.3
RFC1-207ENST00000504554 ARHGAP35Q9NRY4 1499 aa13.17□□□□□ -0.3
RFC1-207ENST00000504554 KCNH8Q96L42 1107 aa13.17□□□□□ -0.3
RFC1-207ENST00000504554 EFCAB5A4FU69 1503 aa13.17□□□□□ -0.3
RFC1-207ENST00000504554 RAPGEF6Q8TEU7 1601 aa13.17□□□□□ -0.3
RFC1-207ENST00000504554 TSPOAP1O95153 1857 aa13.16□□□□□ -0.3
RFC1-207ENST00000504554 MAP3K4Q9Y6R4 1608 aa13.14□□□□□ -0.31
RFC1-207ENST00000504554 COL17A1Q9UMD9 1497 aaPredicted RBP13.13□□□□□ -0.31
RFC1-207ENST00000504554 FXR2P51116 673 aaKnown RBP eCLIP13.13□□□□□ -0.313e-7■■■□□ 19
RFC1-207ENST00000504554 CD109Q6YHK3 1445 aa13.1□□□□□ -0.31
RFC1-207ENST00000504554 KDM6BO15054 1643 aa13.1□□□□□ -0.31
RFC1-207ENST00000504554 CDK13Q14004 1512 aaKnown RBP13.08□□□□□ -0.32
RFC1-207ENST00000504554 SSUH2Q9Y2M2 353 aa13.07□□□□□ -0.32
RFC1-207ENST00000504554 MAGI3Q5TCQ9 1506 aa13.07□□□□□ -0.32
RFC1-207ENST00000504554 FMN1Q68DA7 1419 aa13.05□□□□□ -0.32
RFC1-207ENST00000504554 ZNF692Q9BU19 519 aaPredicted RBP13.05□□□□□ -0.32
RFC1-207ENST00000504554 TEX14Q8IWB6 1497 aa13.04□□□□□ -0.32
RFC1-207ENST00000504554 ATP1B4Q9UN42 357 aaPredicted RBP13.04□□□□□ -0.32
RFC1-207ENST00000504554 CFAP43Q8NDM7 1665 aa13.04□□□□□ -0.32
RFC1-207ENST00000504554 PLEKHD1A6NEE1 506 aa13.03□□□□□ -0.32
RFC1-207ENST00000504554 SP7Q8TDD2 431 aaPredicted RBP13.03□□□□□ -0.32
RFC1-207ENST00000504554 CLIP1P30622 1438 aa13.03□□□□□ -0.32
RFC1-207ENST00000504554 ABCA9Q8IUA7 1624 aa13.02□□□□□ -0.32
RFC1-207ENST00000504554 LOC105371045A0A1W2PR82 267 aa13.02□□□□□ -0.33
RFC1-207ENST00000504554 HECW1Q76N89 1606 aa13□□□□□ -0.33
RFC1-207ENST00000504554 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.99□□□□□ -0.33
RFC1-207ENST00000504554 SPDYE1Q8NFV5 336 aaPredicted RBP12.99□□□□□ -0.33
RFC1-207ENST00000504554 PCF11O94913 1555 aaKnown RBP12.98□□□□□ -0.33
RFC1-207ENST00000504554 CASKIN1Q8WXD9 1431 aa12.98□□□□□ -0.33
RFC1-207ENST00000504554 LRRIQ1Q96JM4 1722 aa12.98□□□□□ -0.33
RFC1-207ENST00000504554 CLEC11AQ9Y240 323 aa12.97□□□□□ -0.33
RFC1-207ENST00000504554 TTC37Q6PGP7 1564 aa12.97□□□□□ -0.33
RFC1-207ENST00000504554 KDM4FA0A1W2PPD8 638 aa12.96□□□□□ -0.33
RFC1-207ENST00000504554 CEP162Q5TB80 1403 aa12.96□□□□□ -0.34
RFC1-207ENST00000504554 ARAP3Q8WWN8 1544 aa12.95□□□□□ -0.34
RFC1-207ENST00000504554 HAX1O00165 279 aa12.95□□□□□ -0.34
RFC1-207ENST00000504554 RAPGEF3O95398 923 aa12.95□□□□□ -0.34
RFC1-207ENST00000504554 TROQ12816 1431 aaPredicted RBP12.94□□□□□ -0.34
RFC1-207ENST00000504554 NEO1Q92859 1461 aa12.93□□□□□ -0.34
RFC1-207ENST00000504554 KIF14Q15058 1648 aa12.93□□□□□ -0.34
RFC1-207ENST00000504554 FYCO1Q9BQS8 1478 aa12.92□□□□□ -0.34
RFC1-207ENST00000504554 FRMPD1Q5SYB0 1578 aa12.91□□□□□ -0.34
RFC1-207ENST00000504554 PLCH2O75038 1416 aa12.91□□□□□ -0.34
RFC1-207ENST00000504554 AKNAQ7Z591 1439 aa12.91□□□□□ -0.34
RFC1-207ENST00000504554 CDK11AQ9UQ88 783 aaPredicted RBP12.91□□□□□ -0.34
RFC1-207ENST00000504554 PHLDB1Q86UU1 1377 aa12.91□□□□□ -0.34
RFC1-207ENST00000504554 FANCAO15360 1455 aa12.91□□□□□ -0.34
RFC1-207ENST00000504554 CCDC18Q5T9S5 1454 aa12.9□□□□□ -0.34
RFC1-207ENST00000504554 PRKAR2AP13861 404 aaKnown RBP12.89□□□□□ -0.35
RFC1-207ENST00000504554 DENND4BO75064 1496 aaPredicted RBP12.86□□□□□ -0.35
RFC1-207ENST00000504554 ADGRL1O94910 1474 aa12.86□□□□□ -0.35
RFC1-207ENST00000504554 EVX2Q03828 476 aa12.85□□□□□ -0.35
RFC1-207ENST00000504554 SCAPERQ9BY12 1400 aa12.84□□□□□ -0.35
RFC1-207ENST00000504554 EFCAB2Q5VUJ9 269 aa12.83□□□□□ -0.36
RFC1-207ENST00000504554 RICTORQ6R327 1708 aa12.82□□□□□ -0.36
RFC1-207ENST00000504554 CFAP74Q9C0B2 1584 aa12.81□□□□□ -0.36
RFC1-207ENST00000504554 POGZQ7Z3K3 1410 aa12.81□□□□□ -0.36
RFC1-207ENST00000504554 YEATS2Q9ULM3 1422 aa12.81□□□□□ -0.36
RFC1-207ENST00000504554 MYO5CQ9NQX4 1742 aa12.81□□□□□ -0.36
RFC1-207ENST00000504554 ARHGAP5Q13017 1502 aa12.81□□□□□ -0.36
RFC1-207ENST00000504554 ARHGEF12Q9NZN5 1544 aa12.8□□□□□ -0.36
RFC1-207ENST00000504554 GPATCH8Q9UKJ3 1502 aaKnown RBP12.79□□□□□ -0.36
RFC1-207ENST00000504554 AFAP1Q8N556 730 aa12.79□□□□□ -0.36
RFC1-207ENST00000504554 CDC42BPBQ9Y5S2 1711 aa12.79□□□□□ -0.36
RFC1-207ENST00000504554 VPS8Q8N3P4 1428 aa12.79□□□□□ -0.36
RFC1-207ENST00000504554 ZMYM4Q5VZL5 1548 aa12.78□□□□□ -0.36
RFC1-207ENST00000504554 PREX2Q70Z35 1606 aa12.78□□□□□ -0.36
RFC1-207ENST00000504554 MTUS2Q5JR59 1369 aa12.78□□□□□ -0.36
RFC1-207ENST00000504554 ARHGEF40Q8TER5 1519 aa12.78□□□□□ -0.36
RFC1-207ENST00000504554 TRAPPC8Q9Y2L5 1435 aa12.77□□□□□ -0.37
RFC1-207ENST00000504554 CDC42BPAQ5VT25 1732 aa12.76□□□□□ -0.37
RFC1-207ENST00000504554 SIGLEC1Q9BZZ2 1709 aa12.76□□□□□ -0.37
RFC1-207ENST00000504554 ABCC1P33527 1531 aa12.75□□□□□ -0.37
RFC1-207ENST00000504554 CHADLQ6NUI6 762 aa12.75□□□□□ -0.37
RFC1-207ENST00000504554 ZFYVE16Q7Z3T8 1539 aa12.75□□□□□ -0.37
RFC1-207ENST00000504554 EHBP1L1Q8N3D4 1523 aa12.74□□□□□ -0.37
RFC1-207ENST00000504554 PRR29P0C7W0 189 aa12.74□□□□□ -0.37
RFC1-207ENST00000504554 ZNF777Q9ULD5 760 aaPredicted RBP12.74□□□□□ -0.37
RFC1-207ENST00000504554 KDM5CP41229 1560 aa12.73□□□□□ -0.37
RFC1-207ENST00000504554 TIAM1Q13009 1591 aa12.73□□□□□ -0.37
RFC1-207ENST00000504554 SAMD9LQ8IVG5 1584 aa12.73□□□□□ -0.37
RFC1-207ENST00000504554 ZNF518AQ6AHZ1 1483 aa12.73□□□□□ -0.37
RFC1-207ENST00000504554 MAGI2Q86UL8 1455 aa12.73□□□□□ -0.37
RFC1-207ENST00000504554 CCNB3Q8WWL7 1395 aa12.73□□□□□ -0.37
RFC1-207ENST00000504554 ZNF644Q9H582 1327 aaPredicted RBP12.73□□□□□ -0.37
RFC1-207ENST00000504554 KANK4Q5T7N3 995 aaPredicted RBP12.73□□□□□ -0.37
RFC1-207ENST00000504554 ARID4BQ4LE39 1312 aaPredicted RBP12.72□□□□□ -0.37
RFC1-207ENST00000504554 HNRNPMP52272 730 aaKnown RBP eCLIP12.72□□□□□ -0.37
RFC1-207ENST00000504554 CFDP1Q9UEE9 299 aaPredicted RBP12.72□□□□□ -0.37
RFC1-207ENST00000504554 C19orf67A6NJJ6 358 aa12.71□□□□□ -0.37
RFC1-207ENST00000504554 NCOA2Q15596 1464 aa12.71□□□□□ -0.38
RFC1-207ENST00000504554 ADAMTSL3P82987 1691 aa12.7□□□□□ -0.38
RFC1-207ENST00000504554 SYCP2Q9BX26 1530 aa12.7□□□□□ -0.38
RFC1-207ENST00000504554 ATP10AO60312 1499 aa12.7□□□□□ -0.38
RFC1-207ENST00000504554 LRRC9Q6ZRR7 1453 aa12.7□□□□□ -0.38
RFC1-207ENST00000504554 ITSN2Q9NZM3 1697 aa12.7□□□□□ -0.38
RFC1-207ENST00000504554 BCORL1Q5H9F3 1711 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms