RNA–Protein interactions for RNA: ENST00000504543.1

USP17L28-201, Transcript of ubiquitin specific peptidase 17-like family member 28, humanhuman

APPRIS P1 BASIC

Gene USP17L28, Length 1,593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L28-201ENST00000504543 APLP2Q06481 763 aa15.75■□□□□ 0.11
USP17L28-201ENST00000504543 COL17A1Q9UMD9 1497 aaPredicted RBP15.74■□□□□ 0.11
USP17L28-201ENST00000504543 SUPT6HQ7KZ85 1726 aaKnown RBP15.74■□□□□ 0.11
USP17L28-201ENST00000504543 CDC42BPBQ9Y5S2 1711 aa15.74■□□□□ 0.11
USP17L28-201ENST00000504543 CDC42BPAQ5VT25 1732 aa15.73■□□□□ 0.11
USP17L28-201ENST00000504543 GPATCH8Q9UKJ3 1502 aaKnown RBP15.73■□□□□ 0.11
USP17L28-201ENST00000504543 CCNB3Q8WWL7 1395 aa15.71■□□□□ 0.11
USP17L28-201ENST00000504543 ARHGAP5Q13017 1502 aa15.7■□□□□ 0.1
USP17L28-201ENST00000504543 ITSN2Q9NZM3 1697 aa15.7■□□□□ 0.1
USP17L28-201ENST00000504543 DENND4BO75064 1496 aaPredicted RBP15.7■□□□□ 0.1
USP17L28-201ENST00000504543 NCOA2Q15596 1464 aa15.7■□□□□ 0.1
USP17L28-201ENST00000504543 ADGRL1O94910 1474 aa15.68■□□□□ 0.1
USP17L28-201ENST00000504543 PLEKHH2Q8IVE3 1493 aa15.68■□□□□ 0.1
USP17L28-201ENST00000504543 KIAA1107Q9UPP5 1409 aa15.67■□□□□ 0.1
USP17L28-201ENST00000504543 KANK4Q5T7N3 995 aaPredicted RBP15.67■□□□□ 0.1
USP17L28-201ENST00000504543 ZMYM4Q5VZL5 1548 aa15.66■□□□□ 0.1
USP17L28-201ENST00000504543 RICTORQ6R327 1708 aa15.66■□□□□ 0.1
USP17L28-201ENST00000504543 MAGI2Q86UL8 1455 aa15.65■□□□□ 0.1
USP17L28-201ENST00000504543 SCAPERQ9BY12 1400 aa15.65■□□□□ 0.1
USP17L28-201ENST00000504543 CFDP1Q9UEE9 299 aaPredicted RBP15.65■□□□□ 0.1
USP17L28-201ENST00000504543 ABCC1P33527 1531 aa15.65■□□□□ 0.1
USP17L28-201ENST00000504543 POGZQ7Z3K3 1410 aa15.65■□□□□ 0.1
USP17L28-201ENST00000504543 MIA2Q96PC5 1412 aa15.65■□□□□ 0.1
USP17L28-201ENST00000504543 FRMPD1Q5SYB0 1578 aa15.64■□□□□ 0.09
USP17L28-201ENST00000504543 ZNF518AQ6AHZ1 1483 aa15.63■□□□□ 0.09
USP17L28-201ENST00000504543 KDM5CP41229 1560 aa15.62■□□□□ 0.09
USP17L28-201ENST00000504543 SAMD9LQ8IVG5 1584 aa15.62■□□□□ 0.09
USP17L28-201ENST00000504543 MYOM3Q5VTT5 1437 aa15.62■□□□□ 0.09
USP17L28-201ENST00000504543 RAPGEF3O95398 923 aa15.6■□□□□ 0.09
USP17L28-201ENST00000504543 RSPH4AQ5TD94 716 aa15.6■□□□□ 0.09
USP17L28-201ENST00000504543 SENP3Q9H4L4 574 aaPredicted RBP15.6■□□□□ 0.09
USP17L28-201ENST00000504543 PPARGC1BQ86YN6 1023 aaKnown RBP15.59■□□□□ 0.09
USP17L28-201ENST00000504543 ARHGEF12Q9NZN5 1544 aa15.59■□□□□ 0.09
USP17L28-201ENST00000504543 MLH3Q9UHC1 1453 aa15.58■□□□□ 0.09
USP17L28-201ENST00000504543 HRCP23327 699 aa15.57■□□□□ 0.08
USP17L28-201ENST00000504543 MBD5Q9P267 1494 aa15.56■□□□□ 0.08
USP17L28-201ENST00000504543 ARHGEF40Q8TER5 1519 aa15.56■□□□□ 0.08
USP17L28-201ENST00000504543 SYCP2Q9BX26 1530 aa15.55■□□□□ 0.08
USP17L28-201ENST00000504543 ARHGEF5Q12774 1597 aa15.55■□□□□ 0.08
USP17L28-201ENST00000504543 TRAPPC8Q9Y2L5 1435 aa15.55■□□□□ 0.08
USP17L28-201ENST00000504543 CAMSAP2Q08AD1 1489 aa15.54■□□□□ 0.08
USP17L28-201ENST00000504543 ZFYVE16Q7Z3T8 1539 aa15.54■□□□□ 0.08
USP17L28-201ENST00000504543 HECW2Q9P2P5 1572 aa15.54■□□□□ 0.08
USP17L28-201ENST00000504543 ZNF777Q9ULD5 760 aaPredicted RBP15.53■□□□□ 0.08
USP17L28-201ENST00000504543 TCOF1Q13428 1488 aaKnown RBP15.53■□□□□ 0.08
USP17L28-201ENST00000504543 AFAP1Q8N556 730 aa15.53■□□□□ 0.08
USP17L28-201ENST00000504543 REREQ9P2R6 1566 aa15.52■□□□□ 0.08
USP17L28-201ENST00000504543 RTEL1-TNFRSF6BF6WH68 1400 aa15.52■□□□□ 0.08
USP17L28-201ENST00000504543 FGD6Q6ZV73 1430 aa15.51■□□□□ 0.07
USP17L28-201ENST00000504543 CCDC141Q6ZP82 1450 aa15.51■□□□□ 0.07
USP17L28-201ENST00000504543 HNRNPMP52272 730 aaKnown RBP eCLIP15.5■□□□□ 0.07
USP17L28-201ENST00000504543 ZNF644Q9H582 1327 aaPredicted RBP15.5■□□□□ 0.07
USP17L28-201ENST00000504543 ATP10AO60312 1499 aa15.5■□□□□ 0.07
USP17L28-201ENST00000504543 INO80Q9ULG1 1556 aaPredicted RBP15.49■□□□□ 0.07
USP17L28-201ENST00000504543 PTPN23Q9H3S7 1636 aa15.49■□□□□ 0.07
USP17L28-201ENST00000504543 KIDINS220Q9ULH0 1771 aa15.49■□□□□ 0.07
USP17L28-201ENST00000504543 YEATS2Q9ULM3 1422 aa15.49■□□□□ 0.07
USP17L28-201ENST00000504543 C9orf84Q5VXU9 1444 aa15.48■□□□□ 0.07
USP17L28-201ENST00000504543 RRBP1Q9P2E9 1410 aaKnown RBP15.48■□□□□ 0.07
USP17L28-201ENST00000504543 SPAG9O60271 1321 aaKnown RBP15.48■□□□□ 0.07
USP17L28-201ENST00000504543 MAST1Q9Y2H9 1570 aa15.47■□□□□ 0.07
USP17L28-201ENST00000504543 ATP7AQ04656 1500 aa15.47■□□□□ 0.07
USP17L28-201ENST00000504543 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.47■□□□□ 0.07
USP17L28-201ENST00000504543 DIP2CQ9Y2E4 1556 aa15.47■□□□□ 0.07
USP17L28-201ENST00000504543 AGLP35573 1532 aa15.46■□□□□ 0.07
USP17L28-201ENST00000504543 SHANK2Q9UPX8 1470 aa15.45■□□□□ 0.06
USP17L28-201ENST00000504543 ABCA6Q8N139 1617 aa15.45■□□□□ 0.06
USP17L28-201ENST00000504543 TSPY4P0CV99 314 aa15.44■□□□□ 0.06
USP17L28-201ENST00000504543 TSPY10P0CW01 314 aa15.44■□□□□ 0.06
USP17L28-201ENST00000504543 DNMT1P26358 1616 aaKnown RBP15.43■□□□□ 0.06
USP17L28-201ENST00000504543 ADGBQ8N7X0 1667 aa15.42■□□□□ 0.06
USP17L28-201ENST00000504543 BCORL1Q5H9F3 1711 aa15.4■□□□□ 0.06
USP17L28-201ENST00000504543 PLXNC1O60486 1568 aa15.4■□□□□ 0.06
USP17L28-201ENST00000504543 CROCC2H7BZ55 1655 aa15.4■□□□□ 0.06
USP17L28-201ENST00000504543 ABCC5O15440 1437 aa15.4■□□□□ 0.06
USP17L28-201ENST00000504543 ADAMTSL3P82987 1691 aa15.39■□□□□ 0.05
USP17L28-201ENST00000504543 DAPK1P53355 1430 aa15.39■□□□□ 0.05
USP17L28-201ENST00000504543 ZEB1P37275 1124 aaPredicted RBP15.38■□□□□ 0.05
USP17L28-201ENST00000504543 PHF23Q9BUL5 403 aaPredicted RBP15.38■□□□□ 0.05
USP17L28-201ENST00000504543 MYT1LQ9UL68 1186 aa15.38■□□□□ 0.05
USP17L28-201ENST00000504543 A2MP01023 1474 aa15.38■□□□□ 0.05
USP17L28-201ENST00000504543 DHX29Q7Z478 1369 aaKnown RBP15.37■□□□□ 0.05
USP17L28-201ENST00000504543 KDM4FA0A1W2PPD8 638 aa15.37■□□□□ 0.05
USP17L28-201ENST00000504543 SIGLEC1Q9BZZ2 1709 aa15.37■□□□□ 0.05
USP17L28-201ENST00000504543 ADGRL2O95490 1459 aa15.36■□□□□ 0.05
USP17L28-201ENST00000504543 PPP6R1Q9UPN7 881 aa15.36■□□□□ 0.05
USP17L28-201ENST00000504543 ARID4BQ4LE39 1312 aaPredicted RBP15.34■□□□□ 0.05
USP17L28-201ENST00000504543 FAM135AQ9P2D6 1515 aa15.34■□□□□ 0.05
USP17L28-201ENST00000504543 DUOX2Q9NRD8 1548 aa15.32■□□□□ 0.04
USP17L28-201ENST00000504543 ANKRD30AQ9BXX3 1397 aa15.32■□□□□ 0.04
USP17L28-201ENST00000504543 EIF2AK4Q9P2K8 1649 aaKnown RBP15.32■□□□□ 0.04
USP17L28-201ENST00000504543 NCOA1Q15788 1441 aa15.32■□□□□ 0.04
USP17L28-201ENST00000504543 FAM50AQ14320 339 aaKnown RBP15.32■□□□□ 0.04
USP17L28-201ENST00000504543 ROCK1Q13464 1354 aa15.31■□□□□ 0.04
USP17L28-201ENST00000504543 ERBINQ96RT1 1412 aa15.29■□□□□ 0.04
USP17L28-201ENST00000504543 CNTLNQ9NXG0 1405 aa15.29■□□□□ 0.04
USP17L28-201ENST00000504543 KIF15Q9NS87 1388 aa15.28■□□□□ 0.04
USP17L28-201ENST00000504543 MADDQ8WXG6 1647 aa15.28■□□□□ 0.04
USP17L28-201ENST00000504543 FER1L4A9Z1Z3 1794 aa15.27■□□□□ 0.04
USP17L28-201ENST00000504543 RNF17Q9BXT8 1623 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms