RNA–Protein interactions for RNA: ENST00000504273.5

SNX25-202, Transcript of sorting nexin 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX25, Length 3,323 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-202ENST00000504273 KDM5BQ9UGL1 1544 aa10.42□□□□□ -0.74
SNX25-202ENST00000504273 ITGAEP38570 1179 aa10.42□□□□□ -0.74
SNX25-202ENST00000504273 MADDQ8WXG6 1647 aa10.41□□□□□ -0.74
SNX25-202ENST00000504273 IQGAP2Q13576 1575 aa10.41□□□□□ -0.74
SNX25-202ENST00000504273 CARMIL2Q6F5E8 1435 aa10.41□□□□□ -0.74
SNX25-202ENST00000504273 SETD5Q9C0A6 1442 aa10.4□□□□□ -0.75
SNX25-202ENST00000504273 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.39□□□□□ -0.75
SNX25-202ENST00000504273 ATP1B4Q9UN42 357 aaPredicted RBP10.39□□□□□ -0.75
SNX25-202ENST00000504273 MED1Q15648 1581 aaPredicted RBP10.39□□□□□ -0.75
SNX25-202ENST00000504273 PTPRKQ15262 1439 aa10.38□□□□□ -0.75
SNX25-202ENST00000504273 FGD6Q6ZV73 1430 aa10.38□□□□□ -0.75
SNX25-202ENST00000504273 UACAQ9BZF9 1416 aa10.38□□□□□ -0.75
SNX25-202ENST00000504273 UGGT2Q9NYU1 1516 aa10.37□□□□□ -0.75
SNX25-202ENST00000504273 POGZQ7Z3K3 1410 aa10.37□□□□□ -0.75
SNX25-202ENST00000504273 NCOA2Q15596 1464 aa10.36□□□□□ -0.75
SNX25-202ENST00000504273 CD109Q6YHK3 1445 aa10.36□□□□□ -0.75
SNX25-202ENST00000504273 SUPT6HQ7KZ85 1726 aaKnown RBP10.36□□□□□ -0.75
SNX25-202ENST00000504273 RIMS1Q86UR5 1692 aaKnown RBP10.36□□□□□ -0.75
SNX25-202ENST00000504273 HSPA2P54652 639 aa10.35□□□□□ -0.75
SNX25-202ENST00000504273 FAM50AQ14320 339 aaKnown RBP10.35□□□□□ -0.75
SNX25-202ENST00000504273 WDR7Q9Y4E6 1490 aa10.35□□□□□ -0.75
SNX25-202ENST00000504273 PREX1Q8TCU6 1659 aa10.35□□□□□ -0.75
SNX25-202ENST00000504273 EHBP1L1Q8N3D4 1523 aa10.35□□□□□ -0.75
SNX25-202ENST00000504273 DISP1Q96F81 1524 aa10.35□□□□□ -0.75
SNX25-202ENST00000504273 HECW1Q76N89 1606 aa10.34□□□□□ -0.75
SNX25-202ENST00000504273 LTBP4Q8N2S1 1624 aa10.34□□□□□ -0.75
SNX25-202ENST00000504273 NEUROD1Q13562 356 aa10.33□□□□□ -0.76
SNX25-202ENST00000504273 MIER1Q8N108 512 aa10.33□□□□□ -0.76
SNX25-202ENST00000504273 KIAA0556O60303 1618 aa10.33□□□□□ -0.76
SNX25-202ENST00000504273 PTPN23Q9H3S7 1636 aa10.33□□□□□ -0.76
SNX25-202ENST00000504273 CDK13Q14004 1512 aaKnown RBP10.33□□□□□ -0.76
SNX25-202ENST00000504273 MYOM3Q5VTT5 1437 aa10.32□□□□□ -0.76
SNX25-202ENST00000504273 MTUS2Q5JR59 1369 aa10.32□□□□□ -0.76
SNX25-202ENST00000504273 CCDC18Q5T9S5 1454 aa10.32□□□□□ -0.76
SNX25-202ENST00000504273 ZCCHC11Q5TAX3 1644 aaKnown RBP10.31□□□□□ -0.76
SNX25-202ENST00000504273 ACIN1Q9UKV3 1341 aaKnown RBP10.3□□□□□ -0.76
SNX25-202ENST00000504273 TCOF1Q13428 1488 aaKnown RBP10.3□□□□□ -0.76
SNX25-202ENST00000504273 STRCQ7RTU9 1775 aa10.3□□□□□ -0.76
SNX25-202ENST00000504273 TTC37Q6PGP7 1564 aa10.29□□□□□ -0.76
SNX25-202ENST00000504273 FANCAO15360 1455 aa10.29□□□□□ -0.76
SNX25-202ENST00000504273 SIN3AQ96ST3 1273 aa10.28□□□□□ -0.76
SNX25-202ENST00000504273 HFM1A2PYH4 1435 aa10.28□□□□□ -0.76
SNX25-202ENST00000504273 NAIPQ13075 1403 aa10.28□□□□□ -0.76
SNX25-202ENST00000504273 ARID4BQ4LE39 1312 aaPredicted RBP10.27□□□□□ -0.76
SNX25-202ENST00000504273 NUP153P49790 1475 aaKnown RBP10.27□□□□□ -0.77
SNX25-202ENST00000504273 GCC2Q8IWJ2 1684 aa10.27□□□□□ -0.77
SNX25-202ENST00000504273 RAPGEF6Q8TEU7 1601 aa10.27□□□□□ -0.77
SNX25-202ENST00000504273 NEO1Q92859 1461 aa10.27□□□□□ -0.77
SNX25-202ENST00000504273 ADRA2BP18089 450 aa10.26□□□□□ -0.77
SNX25-202ENST00000504273 DENND4BO75064 1496 aaPredicted RBP10.26□□□□□ -0.77
SNX25-202ENST00000504273 ARHGEF40Q8TER5 1519 aa10.25□□□□□ -0.77
SNX25-202ENST00000504273 SETD1BQ9UPS6 1966 aaKnown RBP10.24□□□□□ -0.77
SNX25-202ENST00000504273 UBAP1LF5GYI3 381 aa10.23□□□□□ -0.77
SNX25-202ENST00000504273 PRKCSHP14314 528 aaPredicted RBP10.23□□□□□ -0.77
SNX25-202ENST00000504273 UHRF1BP1Q6BDS2 1440 aa10.23□□□□□ -0.77
SNX25-202ENST00000504273 AKNAQ7Z591 1439 aa10.21□□□□□ -0.77
SNX25-202ENST00000504273 ARID3CA6NKF2 412 aa10.21□□□□□ -0.77
SNX25-202ENST00000504273 SENP3Q9H4L4 574 aaPredicted RBP10.21□□□□□ -0.77
SNX25-202ENST00000504273 MIA2Q96PC5 1412 aa10.21□□□□□ -0.77
SNX25-202ENST00000504273 FER1L4A9Z1Z3 1794 aa10.2□□□□□ -0.78
SNX25-202ENST00000504273 DNMT1P26358 1616 aaKnown RBP10.19□□□□□ -0.78
SNX25-202ENST00000504273 KIF14Q15058 1648 aa10.18□□□□□ -0.78
SNX25-202ENST00000504273 MAGI2Q86UL8 1455 aa10.18□□□□□ -0.78
SNX25-202ENST00000504273 PPP1R15AO75807 674 aaPredicted RBP10.18□□□□□ -0.78
SNX25-202ENST00000504273 TIMELESSQ9UNS1 1208 aa10.17□□□□□ -0.78
SNX25-202ENST00000504273 ABCA8O94911 1581 aa10.17□□□□□ -0.78
SNX25-202ENST00000504273 KCNA4P22459 653 aa10.17□□□□□ -0.78
SNX25-202ENST00000504273 BCL11AQ9H165 835 aa10.16□□□□□ -0.78
SNX25-202ENST00000504273 RRP7BPQ9NSQ0 103 aa10.16□□□□□ -0.78
SNX25-202ENST00000504273 ABCC5O15440 1437 aa10.16□□□□□ -0.78
SNX25-202ENST00000504273 ZNF644Q9H582 1327 aaPredicted RBP10.16□□□□□ -0.78
SNX25-202ENST00000504273 YTHDC1Q96MU7 727 aaKnown RBP10.16□□□□□ -0.78
SNX25-202ENST00000504273 CHIC2Q9UKJ5 165 aa10.16□□□□□ -0.78
SNX25-202ENST00000504273 DAPK1P53355 1430 aa10.16□□□□□ -0.78
SNX25-202ENST00000504273 CENPBP07199 599 aaPredicted RBP10.15□□□□□ -0.78
SNX25-202ENST00000504273 GTF3C3Q9Y5Q9 886 aa10.15□□□□□ -0.78
SNX25-202ENST00000504273 ABCA9Q8IUA7 1624 aa10.15□□□□□ -0.78
SNX25-202ENST00000504273 FRMPD1Q5SYB0 1578 aa10.15□□□□□ -0.78
SNX25-202ENST00000504273 ARHGEF12Q9NZN5 1544 aa10.15□□□□□ -0.79
SNX25-202ENST00000504273 TOM1O60784 492 aa10.14□□□□□ -0.79
SNX25-202ENST00000504273 ZMYM4Q5VZL5 1548 aa10.14□□□□□ -0.79
SNX25-202ENST00000504273 TROQ12816 1431 aaPredicted RBP10.14□□□□□ -0.79
SNX25-202ENST00000504273 CROCC2H7BZ55 1655 aa10.14□□□□□ -0.79
SNX25-202ENST00000504273 NCOA1Q15788 1441 aa10.14□□□□□ -0.79
SNX25-202ENST00000504273 CDC42BPAQ5VT25 1732 aa10.13□□□□□ -0.79
SNX25-202ENST00000504273 HSPA1LP34931 641 aa10.13□□□□□ -0.79
SNX25-202ENST00000504273 GPATCH8Q9UKJ3 1502 aaKnown RBP10.13□□□□□ -0.79
SNX25-202ENST00000504273 ITSN2Q9NZM3 1697 aa10.12□□□□□ -0.79
SNX25-202ENST00000504273 ROCK1Q13464 1354 aa10.12□□□□□ -0.79
SNX25-202ENST00000504273 CFAP74Q9C0B2 1584 aa10.11□□□□□ -0.79
SNX25-202ENST00000504273 ADGBQ8N7X0 1667 aa10.11□□□□□ -0.79
SNX25-202ENST00000504273 CAMSAP2Q08AD1 1489 aa10.11□□□□□ -0.79
SNX25-202ENST00000504273 ATP10BO94823 1461 aa10.11□□□□□ -0.79
SNX25-202ENST00000504273 HIRIP3Q9BW71 556 aaPredicted RBP10.1□□□□□ -0.79
SNX25-202ENST00000504273 ZFYVE16Q7Z3T8 1539 aa10.1□□□□□ -0.79
SNX25-202ENST00000504273 KCNH8Q96L42 1107 aa10.09□□□□□ -0.79
SNX25-202ENST00000504273 CPS1P31327 1500 aa10.09□□□□□ -0.79
SNX25-202ENST00000504273 RAPGEF3O95398 923 aa10.08□□□□□ -0.8
SNX25-202ENST00000504273 RICTORQ6R327 1708 aa10.08□□□□□ -0.8
SNX25-202ENST00000504273 MPHOSPH9Q99550 1183 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms