RNA–Protein interactions for RNA: ENST00000504086.1

ITGA1-202, Transcript of integrin subunit alpha 1, humanhuman

TSL 2

Gene ITGA1, Length 1,366 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-202ENST00000504086 ARAP3Q8WWN8 1544 aa27.6■■■□□ 2.01
ITGA1-202ENST00000504086 KANK4Q5T7N3 995 aaPredicted RBP27.6■■■□□ 2.01
ITGA1-202ENST00000504086 PREX2Q70Z35 1606 aa27.57■■■□□ 2
ITGA1-202ENST00000504086 SUPT6HQ7KZ85 1726 aaKnown RBP27.57■■■□□ 2
ITGA1-202ENST00000504086 ADGRL1O94910 1474 aa27.56■■■□□ 2
ITGA1-202ENST00000504086 RAPGEF3O95398 923 aa27.55■■■□□ 2
ITGA1-202ENST00000504086 ZNF777Q9ULD5 760 aaPredicted RBP27.55■■■□□ 2
ITGA1-202ENST00000504086 NCOA2Q15596 1464 aa27.55■■■□□ 2
ITGA1-202ENST00000504086 GPATCH8Q9UKJ3 1502 aaKnown RBP27.55■■■□□ 2
ITGA1-202ENST00000504086 CDC42BPAQ5VT25 1732 aa27.54■■■□□ 2
ITGA1-202ENST00000504086 CDC42BPBQ9Y5S2 1711 aa27.53■■■□□ 2
ITGA1-202ENST00000504086 CFDP1Q9UEE9 299 aaPredicted RBP27.53■■■□□ 2
ITGA1-202ENST00000504086 DENND4BO75064 1496 aaPredicted RBP27.52■■■□□ 2
ITGA1-202ENST00000504086 SCAPERQ9BY12 1400 aa27.51■■□□□ 1.99
ITGA1-202ENST00000504086 ITSN2Q9NZM3 1697 aa27.46■■□□□ 1.99
ITGA1-202ENST00000504086 FRMPD1Q5SYB0 1578 aa27.43■■□□□ 1.98
ITGA1-202ENST00000504086 POGZQ7Z3K3 1410 aa27.43■■□□□ 1.98
ITGA1-202ENST00000504086 ABCC1P33527 1531 aa27.41■■□□□ 1.98
ITGA1-202ENST00000504086 SAMD9LQ8IVG5 1584 aa27.41■■□□□ 1.98
ITGA1-202ENST00000504086 RICTORQ6R327 1708 aa27.4■■□□□ 1.98
ITGA1-202ENST00000504086 MYT1LQ9UL68 1186 aa27.38■■□□□ 1.97
ITGA1-202ENST00000504086 ZNF518AQ6AHZ1 1483 aa27.37■■□□□ 1.97
ITGA1-202ENST00000504086 SYCP2Q9BX26 1530 aa27.37■■□□□ 1.97
ITGA1-202ENST00000504086 ZNF644Q9H582 1327 aaPredicted RBP27.37■■□□□ 1.97
ITGA1-202ENST00000504086 PLEKHH2Q8IVE3 1493 aa27.36■■□□□ 1.97
ITGA1-202ENST00000504086 HNRNPMP52272 730 aaKnown RBP eCLIP27.35■■□□□ 1.97
ITGA1-202ENST00000504086 AFAP1Q8N556 730 aa27.35■■□□□ 1.97
ITGA1-202ENST00000504086 ARHGEF12Q9NZN5 1544 aa27.35■■□□□ 1.97
ITGA1-202ENST00000504086 MYOM3Q5VTT5 1437 aa27.35■■□□□ 1.97
ITGA1-202ENST00000504086 PPARGC1BQ86YN6 1023 aaKnown RBP27.35■■□□□ 1.97
ITGA1-202ENST00000504086 TRAPPC8Q9Y2L5 1435 aa27.34■■□□□ 1.97
ITGA1-202ENST00000504086 ZMYM4Q5VZL5 1548 aa27.32■■□□□ 1.96
ITGA1-202ENST00000504086 KIAA1107Q9UPP5 1409 aa27.3■■□□□ 1.96
ITGA1-202ENST00000504086 CAMSAP2Q08AD1 1489 aa27.3■■□□□ 1.96
ITGA1-202ENST00000504086 ZFYVE16Q7Z3T8 1539 aa27.29■■□□□ 1.96
ITGA1-202ENST00000504086 MAGI2Q86UL8 1455 aa27.27■■□□□ 1.96
ITGA1-202ENST00000504086 ARHGEF40Q8TER5 1519 aa27.27■■□□□ 1.96
ITGA1-202ENST00000504086 KDM5CP41229 1560 aa27.26■■□□□ 1.96
ITGA1-202ENST00000504086 MIA2Q96PC5 1412 aa27.26■■□□□ 1.95
ITGA1-202ENST00000504086 YEATS2Q9ULM3 1422 aa27.26■■□□□ 1.95
ITGA1-202ENST00000504086 HECW2Q9P2P5 1572 aa27.23■■□□□ 1.95
ITGA1-202ENST00000504086 SPAG9O60271 1321 aaKnown RBP27.23■■□□□ 1.95
ITGA1-202ENST00000504086 ARID4BQ4LE39 1312 aaPredicted RBP27.21■■□□□ 1.95
ITGA1-202ENST00000504086 FGD6Q6ZV73 1430 aa27.2■■□□□ 1.95
ITGA1-202ENST00000504086 MBD5Q9P267 1494 aa27.2■■□□□ 1.94
ITGA1-202ENST00000504086 MLH3Q9UHC1 1453 aa27.2■■□□□ 1.94
ITGA1-202ENST00000504086 CCDC141Q6ZP82 1450 aa27.18■■□□□ 1.94
ITGA1-202ENST00000504086 PTPN23Q9H3S7 1636 aa27.17■■□□□ 1.94
ITGA1-202ENST00000504086 SENP3Q9H4L4 574 aaPredicted RBP27.16■■□□□ 1.94
ITGA1-202ENST00000504086 RSPH4AQ5TD94 716 aa27.15■■□□□ 1.94
ITGA1-202ENST00000504086 ATP10AO60312 1499 aa27.15■■□□□ 1.94
ITGA1-202ENST00000504086 FAM50AQ14320 339 aaKnown RBP27.13■■□□□ 1.93
ITGA1-202ENST00000504086 C9orf84Q5VXU9 1444 aa27.13■■□□□ 1.93
ITGA1-202ENST00000504086 ATP7AQ04656 1500 aa27.13■■□□□ 1.93
ITGA1-202ENST00000504086 TSPY4P0CV99 314 aa27.12■■□□□ 1.93
ITGA1-202ENST00000504086 TSPY10P0CW01 314 aa27.12■■□□□ 1.93
ITGA1-202ENST00000504086 ARHGEF5Q12774 1597 aa27.12■■□□□ 1.93
ITGA1-202ENST00000504086 DIP2CQ9Y2E4 1556 aa27.12■■□□□ 1.93
ITGA1-202ENST00000504086 ABCA6Q8N139 1617 aa27.12■■□□□ 1.93
ITGA1-202ENST00000504086 KIDINS220Q9ULH0 1771 aa27.11■■□□□ 1.93
ITGA1-202ENST00000504086 TCOF1Q13428 1488 aaKnown RBP27.09■■□□□ 1.93
ITGA1-202ENST00000504086 INO80Q9ULG1 1556 aaPredicted RBP27.09■■□□□ 1.93
ITGA1-202ENST00000504086 KDM4FA0A1W2PPD8 638 aa27.07■■□□□ 1.92
ITGA1-202ENST00000504086 RTEL1-TNFRSF6BF6WH68 1400 aa27.05■■□□□ 1.92
ITGA1-202ENST00000504086 MLECQ14165 292 aa27.04■■□□□ 1.92
ITGA1-202ENST00000504086 SIGLEC1Q9BZZ2 1709 aa27.01■■□□□ 1.91
ITGA1-202ENST00000504086 DAPK1P53355 1430 aa27.01■■□□□ 1.91
ITGA1-202ENST00000504086 ABCC5O15440 1437 aa27■■□□□ 1.91
ITGA1-202ENST00000504086 REREQ9P2R6 1566 aa26.99■■□□□ 1.91
ITGA1-202ENST00000504086 A2MP01023 1474 aa26.99■■□□□ 1.91
ITGA1-202ENST00000504086 DNMT1P26358 1616 aaKnown RBP26.98■■□□□ 1.91
ITGA1-202ENST00000504086 BCORL1Q5H9F3 1711 aa26.97■■□□□ 1.91
ITGA1-202ENST00000504086 MAST1Q9Y2H9 1570 aa26.96■■□□□ 1.91
ITGA1-202ENST00000504086 CHIC2Q9UKJ5 165 aa26.96■■□□□ 1.91
ITGA1-202ENST00000504086 CROCC2H7BZ55 1655 aa26.95■■□□□ 1.9
ITGA1-202ENST00000504086 ADGBQ8N7X0 1667 aa26.95■■□□□ 1.9
ITGA1-202ENST00000504086 SHANK2Q9UPX8 1470 aa26.95■■□□□ 1.9
ITGA1-202ENST00000504086 AGLP35573 1532 aa26.92■■□□□ 1.9
ITGA1-202ENST00000504086 ITGAEP38570 1179 aa26.92■■□□□ 1.9
ITGA1-202ENST00000504086 DHX29Q7Z478 1369 aaKnown RBP26.9■■□□□ 1.9
ITGA1-202ENST00000504086 ADAMTSL3P82987 1691 aa26.9■■□□□ 1.9
ITGA1-202ENST00000504086 PLXNC1O60486 1568 aa26.9■■□□□ 1.9
ITGA1-202ENST00000504086 RRP7BPQ9NSQ0 103 aa26.89■■□□□ 1.9
ITGA1-202ENST00000504086 MADDQ8WXG6 1647 aa26.88■■□□□ 1.89
ITGA1-202ENST00000504086 RRBP1Q9P2E9 1410 aaKnown RBP26.87■■□□□ 1.89
ITGA1-202ENST00000504086 ANKRD30AQ9BXX3 1397 aa26.87■■□□□ 1.89
ITGA1-202ENST00000504086 ESF1Q9H501 851 aaKnown RBP26.86■■□□□ 1.89
ITGA1-202ENST00000504086 KIF15Q9NS87 1388 aa26.86■■□□□ 1.89
ITGA1-202ENST00000504086 GGT6Q6P531 493 aa26.85■■□□□ 1.89
ITGA1-202ENST00000504086 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.85■■□□□ 1.895e-6■■■■■ 46.2
ITGA1-202ENST00000504086 KIF3BO15066 747 aa26.84■■□□□ 1.89
ITGA1-202ENST00000504086 PLPPR3Q6T4P5 718 aa26.84■■□□□ 1.89
ITGA1-202ENST00000504086 RIMS1Q86UR5 1692 aaKnown RBP26.83■■□□□ 1.89
ITGA1-202ENST00000504086 FER1L4A9Z1Z3 1794 aa26.82■■□□□ 1.88
ITGA1-202ENST00000504086 DUOX2Q9NRD8 1548 aa26.81■■□□□ 1.88
ITGA1-202ENST00000504086 PTPRMP28827 1452 aa26.8■■□□□ 1.88
ITGA1-202ENST00000504086 PTPRKQ15262 1439 aa26.79■■□□□ 1.88
ITGA1-202ENST00000504086 NCOA1Q15788 1441 aa26.78■■□□□ 1.88
ITGA1-202ENST00000504086 ADGRL2O95490 1459 aa26.78■■□□□ 1.88
ITGA1-202ENST00000504086 ERBINQ96RT1 1412 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms