RNA–Protein interactions for RNA: ENST00000504023.1

MATR3-207, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-207ENST00000504023 CFAP74Q9C0B2 1584 aa12.87□□□□□ -0.35
MATR3-207ENST00000504023 CDC42BPAQ5VT25 1732 aa12.85□□□□□ -0.35
MATR3-207ENST00000504023 LOC105371045A0A1W2PR82 267 aa12.84□□□□□ -0.35
MATR3-207ENST00000504023 CD109Q6YHK3 1445 aa12.84□□□□□ -0.35
MATR3-207ENST00000504023 CDC42BPBQ9Y5S2 1711 aa12.84□□□□□ -0.35
MATR3-207ENST00000504023 PREX2Q70Z35 1606 aa12.84□□□□□ -0.35
MATR3-207ENST00000504023 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.83□□□□□ -0.36
MATR3-207ENST00000504023 HNRNPUL2Q1KMD3 747 aaKnown RBP12.83□□□□□ -0.36
MATR3-207ENST00000504023 TROQ12816 1431 aaPredicted RBP12.82□□□□□ -0.36
MATR3-207ENST00000504023 KCNH8Q96L42 1107 aa12.82□□□□□ -0.36
MATR3-207ENST00000504023 RICTORQ6R327 1708 aa12.81□□□□□ -0.36
MATR3-207ENST00000504023 ARAP3Q8WWN8 1544 aa12.81□□□□□ -0.36
MATR3-207ENST00000504023 VPS8Q8N3P4 1428 aa12.8□□□□□ -0.36
MATR3-207ENST00000504023 PLEKHD1A6NEE1 506 aa12.8□□□□□ -0.36
MATR3-207ENST00000504023 ATP1B4Q9UN42 357 aaPredicted RBP12.8□□□□□ -0.36
MATR3-207ENST00000504023 TIAM1Q13009 1591 aa12.8□□□□□ -0.36
MATR3-207ENST00000504023 EHBP1L1Q8N3D4 1523 aa12.79□□□□□ -0.36
MATR3-207ENST00000504023 NEO1Q92859 1461 aa12.78□□□□□ -0.36
MATR3-207ENST00000504023 ITSN2Q9NZM3 1697 aa12.78□□□□□ -0.36
MATR3-207ENST00000504023 FRMPD1Q5SYB0 1578 aa12.77□□□□□ -0.36
MATR3-207ENST00000504023 COL17A1Q9UMD9 1497 aaPredicted RBP12.77□□□□□ -0.37
MATR3-207ENST00000504023 SUPT6HQ7KZ85 1726 aaKnown RBP12.76□□□□□ -0.37
MATR3-207ENST00000504023 CDK11AQ9UQ88 783 aaPredicted RBP12.76□□□□□ -0.37
MATR3-207ENST00000504023 FANCAO15360 1455 aa12.75□□□□□ -0.37
MATR3-207ENST00000504023 MAP3K1Q13233 1512 aa12.73□□□□□ -0.37
MATR3-207ENST00000504023 PHLDB1Q86UU1 1377 aa12.73□□□□□ -0.37
MATR3-207ENST00000504023 ARHGAP5Q13017 1502 aa12.72□□□□□ -0.37
MATR3-207ENST00000504023 PLCH2O75038 1416 aa12.72□□□□□ -0.37
MATR3-207ENST00000504023 ZMYM4Q5VZL5 1548 aa12.71□□□□□ -0.38
MATR3-207ENST00000504023 ABCC1P33527 1531 aa12.7□□□□□ -0.38
MATR3-207ENST00000504023 AKNAQ7Z591 1439 aa12.7□□□□□ -0.38
MATR3-207ENST00000504023 SAMD9LQ8IVG5 1584 aa12.69□□□□□ -0.38
MATR3-207ENST00000504023 ARHGEF40Q8TER5 1519 aa12.69□□□□□ -0.38
MATR3-207ENST00000504023 ADGRL1O94910 1474 aa12.69□□□□□ -0.38
MATR3-207ENST00000504023 MTUS2Q5JR59 1369 aa12.69□□□□□ -0.38
MATR3-207ENST00000504023 LRRC9Q6ZRR7 1453 aa12.67□□□□□ -0.38
MATR3-207ENST00000504023 KDM5CP41229 1560 aa12.67□□□□□ -0.38
MATR3-207ENST00000504023 GPATCH8Q9UKJ3 1502 aaKnown RBP12.67□□□□□ -0.38
MATR3-207ENST00000504023 DENND4BO75064 1496 aaPredicted RBP12.66□□□□□ -0.38
MATR3-207ENST00000504023 HECW2Q9P2P5 1572 aa12.65□□□□□ -0.38
MATR3-207ENST00000504023 POGZQ7Z3K3 1410 aa12.65□□□□□ -0.38
MATR3-207ENST00000504023 CAPN15O75808 1086 aa12.65□□□□□ -0.38
MATR3-207ENST00000504023 NCOA2Q15596 1464 aa12.65□□□□□ -0.38
MATR3-207ENST00000504023 SIGLEC1Q9BZZ2 1709 aa12.63□□□□□ -0.39
MATR3-207ENST00000504023 SYCP2Q9BX26 1530 aa12.62□□□□□ -0.39
MATR3-207ENST00000504023 ABCA6Q8N139 1617 aa12.62□□□□□ -0.39
MATR3-207ENST00000504023 ZFYVE16Q7Z3T8 1539 aa12.62□□□□□ -0.39
MATR3-207ENST00000504023 SCAPERQ9BY12 1400 aa12.62□□□□□ -0.39
MATR3-207ENST00000504023 KIDINS220Q9ULH0 1771 aa12.61□□□□□ -0.39
MATR3-207ENST00000504023 ZNF518AQ6AHZ1 1483 aa12.61□□□□□ -0.39
MATR3-207ENST00000504023 EFCAB2Q5VUJ9 269 aa12.61□□□□□ -0.39
MATR3-207ENST00000504023 INO80Q9ULG1 1556 aaPredicted RBP12.6□□□□□ -0.39
MATR3-207ENST00000504023 CCNB3Q8WWL7 1395 aa12.6□□□□□ -0.39
MATR3-207ENST00000504023 ARHGEF12Q9NZN5 1544 aa12.6□□□□□ -0.39
MATR3-207ENST00000504023 MAGI2Q86UL8 1455 aa12.59□□□□□ -0.39
MATR3-207ENST00000504023 DSG3P32926 999 aa12.59□□□□□ -0.39
MATR3-207ENST00000504023 DIP2CQ9Y2E4 1556 aa12.59□□□□□ -0.39
MATR3-207ENST00000504023 BCORL1Q5H9F3 1711 aa12.59□□□□□ -0.39
MATR3-207ENST00000504023 PLEKHH2Q8IVE3 1493 aa12.59□□□□□ -0.39
MATR3-207ENST00000504023 CROCC2H7BZ55 1655 aa12.58□□□□□ -0.4
MATR3-207ENST00000504023 RAPGEF3O95398 923 aa12.58□□□□□ -0.4
MATR3-207ENST00000504023 REREQ9P2R6 1566 aa12.57□□□□□ -0.4
MATR3-207ENST00000504023 CAMSAP2Q08AD1 1489 aa12.57□□□□□ -0.4
MATR3-207ENST00000504023 ADGBQ8N7X0 1667 aa12.57□□□□□ -0.4
MATR3-207ENST00000504023 ARHGEF5Q12774 1597 aa12.56□□□□□ -0.4
MATR3-207ENST00000504023 ADAMTSL3P82987 1691 aa12.56□□□□□ -0.4
MATR3-207ENST00000504023 YEATS2Q9ULM3 1422 aa12.55□□□□□ -0.4
MATR3-207ENST00000504023 TRAPPC8Q9Y2L5 1435 aa12.55□□□□□ -0.4
MATR3-207ENST00000504023 MLH3Q9UHC1 1453 aa12.55□□□□□ -0.4
MATR3-207ENST00000504023 FER1L4A9Z1Z3 1794 aa12.55□□□□□ -0.4
MATR3-207ENST00000504023 KIAA1107Q9UPP5 1409 aa12.54□□□□□ -0.4
MATR3-207ENST00000504023 ATP7AQ04656 1500 aa12.54□□□□□ -0.4
MATR3-207ENST00000504023 KANK4Q5T7N3 995 aaPredicted RBP12.54□□□□□ -0.4
MATR3-207ENST00000504023 PTPN23Q9H3S7 1636 aa12.54□□□□□ -0.4
MATR3-207ENST00000504023 MYOM3Q5VTT5 1437 aa12.54□□□□□ -0.4
MATR3-207ENST00000504023 MADDQ8WXG6 1647 aa12.52□□□□□ -0.4
MATR3-207ENST00000504023 CFDP1Q9UEE9 299 aaPredicted RBP12.52□□□□□ -0.41
MATR3-207ENST00000504023 MBD5Q9P267 1494 aa12.52□□□□□ -0.41
MATR3-207ENST00000504023 APLP2Q06481 763 aa12.51□□□□□ -0.41
MATR3-207ENST00000504023 C9orf84Q5VXU9 1444 aa12.51□□□□□ -0.41
MATR3-207ENST00000504023 MIA2Q96PC5 1412 aa12.51□□□□□ -0.41
MATR3-207ENST00000504023 CCDC141Q6ZP82 1450 aa12.51□□□□□ -0.41
MATR3-207ENST00000504023 PLXNC1O60486 1568 aa12.51□□□□□ -0.41
MATR3-207ENST00000504023 MAST1Q9Y2H9 1570 aa12.51□□□□□ -0.41
MATR3-207ENST00000504023 RIMS1Q86UR5 1692 aaKnown RBP12.51□□□□□ -0.41
MATR3-207ENST00000504023 DNMT1P26358 1616 aaKnown RBP12.49□□□□□ -0.41
MATR3-207ENST00000504023 ATP10AO60312 1499 aa12.49□□□□□ -0.41
MATR3-207ENST00000504023 SPINK5Q9NQ38 1064 aaPredicted RBP12.49□□□□□ -0.41
MATR3-207ENST00000504023 ZNF777Q9ULD5 760 aaPredicted RBP12.49□□□□□ -0.41
MATR3-207ENST00000504023 AFAP1Q8N556 730 aa12.48□□□□□ -0.41
MATR3-207ENST00000504023 AGLP35573 1532 aa12.47□□□□□ -0.41
MATR3-207ENST00000504023 TCOF1Q13428 1488 aaKnown RBP12.47□□□□□ -0.41
MATR3-207ENST00000504023 FOXD4L1Q9NU39 408 aa12.47□□□□□ -0.41
MATR3-207ENST00000504023 FGD6Q6ZV73 1430 aa12.46□□□□□ -0.41
MATR3-207ENST00000504023 ZNF644Q9H582 1327 aaPredicted RBP12.46□□□□□ -0.41
MATR3-207ENST00000504023 KDM4FA0A1W2PPD8 638 aa12.46□□□□□ -0.41
MATR3-207ENST00000504023 HNRNPMP52272 730 aaKnown RBP eCLIP12.45□□□□□ -0.422e-9■■■■■ 32.6
MATR3-207ENST00000504023 SHANK2Q9UPX8 1470 aa12.44□□□□□ -0.42
MATR3-207ENST00000504023 MROH2AA6NES4 1674 aa12.44□□□□□ -0.42
MATR3-207ENST00000504023 RTEL1-TNFRSF6BF6WH68 1400 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms