RNA–Protein interactions for RNA: ENST00000503258.5

PDE4D-210, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-210ENST00000503258 MLH3Q9UHC1 1453 aa13.33□□□□□ -0.28
PDE4D-210ENST00000503258 PREX2Q70Z35 1606 aa13.33□□□□□ -0.28
PDE4D-210ENST00000503258 STRCQ7RTU9 1775 aa13.32□□□□□ -0.28
PDE4D-210ENST00000503258 ZNF518AQ6AHZ1 1483 aa13.31□□□□□ -0.28
PDE4D-210ENST00000503258 DIP2CQ9Y2E4 1556 aa13.3□□□□□ -0.28
PDE4D-210ENST00000503258 FMN1Q68DA7 1419 aa13.3□□□□□ -0.28
PDE4D-210ENST00000503258 CNTLNQ9NXG0 1405 aa13.29□□□□□ -0.28
PDE4D-210ENST00000503258 SETD1BQ9UPS6 1966 aaKnown RBP13.28□□□□□ -0.28
PDE4D-210ENST00000503258 NPATQ14207 1427 aa13.28□□□□□ -0.28
PDE4D-210ENST00000503258 CCDC18Q5T9S5 1454 aa13.27□□□□□ -0.28
PDE4D-210ENST00000503258 C3P01024 1663 aa13.27□□□□□ -0.29
PDE4D-210ENST00000503258 ABCC1P33527 1531 aa13.27□□□□□ -0.29
PDE4D-210ENST00000503258 CDC42BPBQ9Y5S2 1711 aa13.26□□□□□ -0.29
PDE4D-210ENST00000503258 CSRNP3Q8WYN3 585 aa13.26□□□□□ -0.29
PDE4D-210ENST00000503258 YEATS2Q9ULM3 1422 aa13.25□□□□□ -0.29
PDE4D-210ENST00000503258 LRRIQ1Q96JM4 1722 aa13.24□□□□□ -0.29
PDE4D-210ENST00000503258 ABCA6Q8N139 1617 aa13.24□□□□□ -0.29
PDE4D-210ENST00000503258 TROQ12816 1431 aaPredicted RBP13.24□□□□□ -0.29
PDE4D-210ENST00000503258 PLXNC1O60486 1568 aa13.24□□□□□ -0.29
PDE4D-210ENST00000503258 PLEKHD1A6NEE1 506 aa13.22□□□□□ -0.29
PDE4D-210ENST00000503258 DMRT2Q9Y5R5 561 aa13.22□□□□□ -0.29
PDE4D-210ENST00000503258 LTBP4Q8N2S1 1624 aa13.22□□□□□ -0.29
PDE4D-210ENST00000503258 PLA2R1Q13018 1463 aa13.22□□□□□ -0.29
PDE4D-210ENST00000503258 CLIP1P30622 1438 aa13.2□□□□□ -0.3
PDE4D-210ENST00000503258 KIDINS220Q9ULH0 1771 aa13.2□□□□□ -0.3
PDE4D-210ENST00000503258 INO80Q9ULG1 1556 aaPredicted RBP13.19□□□□□ -0.3
PDE4D-210ENST00000503258 ADGBQ8N7X0 1667 aa13.19□□□□□ -0.3
PDE4D-210ENST00000503258 CDC42BPAQ5VT25 1732 aa13.19□□□□□ -0.3
PDE4D-210ENST00000503258 KCNH8Q96L42 1107 aa13.18□□□□□ -0.3
PDE4D-210ENST00000503258 PLEKHH2Q8IVE3 1493 aa13.18□□□□□ -0.3
PDE4D-210ENST00000503258 SCAPERQ9BY12 1400 aa13.18□□□□□ -0.3
PDE4D-210ENST00000503258 UHRF1BP1Q6BDS2 1440 aa13.17□□□□□ -0.3
PDE4D-210ENST00000503258 KIAA1107Q9UPP5 1409 aa13.16□□□□□ -0.3
PDE4D-210ENST00000503258 CASKIN1Q8WXD9 1431 aa13.16□□□□□ -0.3
PDE4D-210ENST00000503258 ARHGAP35Q9NRY4 1499 aa13.16□□□□□ -0.3
PDE4D-210ENST00000503258 NCOA1Q15788 1441 aa13.15□□□□□ -0.3
PDE4D-210ENST00000503258 CERKQ8TCT0 537 aa13.15□□□□□ -0.3
PDE4D-210ENST00000503258 CDK13Q14004 1512 aaKnown RBP13.15□□□□□ -0.3
PDE4D-210ENST00000503258 TRAPPC8Q9Y2L5 1435 aa13.15□□□□□ -0.3
PDE4D-210ENST00000503258 PPP6R1Q9UPN7 881 aa13.15□□□□□ -0.3
PDE4D-210ENST00000503258 FYCO1Q9BQS8 1478 aa13.15□□□□□ -0.3
PDE4D-210ENST00000503258 RAPGEF3O95398 923 aa13.14□□□□□ -0.31
PDE4D-210ENST00000503258 EFCAB2Q5VUJ9 269 aa13.14□□□□□ -0.31
PDE4D-210ENST00000503258 SPATA31D1Q6ZQQ2 1576 aa13.13□□□□□ -0.31
PDE4D-210ENST00000503258 SAMD9LQ8IVG5 1584 aa13.13□□□□□ -0.31
PDE4D-210ENST00000503258 MYO3AQ8NEV4 1616 aa13.13□□□□□ -0.31
PDE4D-210ENST00000503258 CDK11AQ9UQ88 783 aaPredicted RBP13.12□□□□□ -0.31
PDE4D-210ENST00000503258 ARHGAP5Q13017 1502 aa13.11□□□□□ -0.31
PDE4D-210ENST00000503258 TCOF1Q13428 1488 aaKnown RBP13.1□□□□□ -0.31
PDE4D-210ENST00000503258 DEPDC5O75140 1603 aa13.09□□□□□ -0.31
PDE4D-210ENST00000503258 POLR1AO95602 1720 aaPredicted RBP13.09□□□□□ -0.31
PDE4D-210ENST00000503258 RTEL1-TNFRSF6BF6WH68 1400 aa13.08□□□□□ -0.32
PDE4D-210ENST00000503258 TTBK1Q5TCY1 1321 aaPredicted RBP13.08□□□□□ -0.32
PDE4D-210ENST00000503258 ZC3H13Q5T200 1668 aaKnown RBP13.07□□□□□ -0.32
PDE4D-210ENST00000503258 CPS1P31327 1500 aa13.07□□□□□ -0.32
PDE4D-210ENST00000503258 ATP7AQ04656 1500 aa13.05□□□□□ -0.32
PDE4D-210ENST00000503258 CEP170BQ9Y4F5 1589 aaPredicted RBP13.04□□□□□ -0.32
PDE4D-210ENST00000503258 SYNMO15061 1565 aa13.03□□□□□ -0.32
PDE4D-210ENST00000503258 EIF2AK4Q9P2K8 1649 aaKnown RBP13.03□□□□□ -0.32
PDE4D-210ENST00000503258 SUPT6HQ7KZ85 1726 aaKnown RBP13.03□□□□□ -0.32
PDE4D-210ENST00000503258 MAST1Q9Y2H9 1570 aa13.02□□□□□ -0.32
PDE4D-210ENST00000503258 KDM5AP29375 1690 aaKnown RBP13.02□□□□□ -0.32
PDE4D-210ENST00000503258 ARID4BQ4LE39 1312 aaPredicted RBP13.02□□□□□ -0.33
PDE4D-210ENST00000503258 CAMSAP1Q5T5Y3 1602 aa13.01□□□□□ -0.33
PDE4D-210ENST00000503258 RNF17Q9BXT8 1623 aaKnown RBP13.01□□□□□ -0.33
PDE4D-210ENST00000503258 ARHGEF5Q12774 1597 aa13.01□□□□□ -0.33
PDE4D-210ENST00000503258 CLTCQ00610 1675 aaKnown RBP13.01□□□□□ -0.33
PDE4D-210ENST00000503258 PTPRKQ15262 1439 aa13.01□□□□□ -0.33
PDE4D-210ENST00000503258 A2ML1A8K2U0 1454 aa13□□□□□ -0.33
PDE4D-210ENST00000503258 MED14O60244 1454 aa13□□□□□ -0.33
PDE4D-210ENST00000503258 PKD2Q13563 968 aa12.99□□□□□ -0.33
PDE4D-210ENST00000503258 KDM5DQ9BY66 1539 aa12.99□□□□□ -0.33
PDE4D-210ENST00000503258 EHBP1L1Q8N3D4 1523 aa12.99□□□□□ -0.33
PDE4D-210ENST00000503258 GPATCH8Q9UKJ3 1502 aaKnown RBP12.99□□□□□ -0.33
PDE4D-210ENST00000503258 SOCS7O14512 581 aa12.98□□□□□ -0.33
PDE4D-210ENST00000503258 CAMSAP2Q08AD1 1489 aa12.98□□□□□ -0.33
PDE4D-210ENST00000503258 DNMT1P26358 1616 aaKnown RBP12.98□□□□□ -0.33
PDE4D-210ENST00000503258 A2MP01023 1474 aa12.97□□□□□ -0.33
PDE4D-210ENST00000503258 NEURL4Q96JN8 1562 aa12.96□□□□□ -0.33
PDE4D-210ENST00000503258 NLRP1Q9C000 1473 aa12.95□□□□□ -0.34
PDE4D-210ENST00000503258 SYCP2Q9BX26 1530 aa12.94□□□□□ -0.34
PDE4D-210ENST00000503258 PZPP20742 1482 aa12.94□□□□□ -0.34
PDE4D-210ENST00000503258 CEP162Q5TB80 1403 aa12.94□□□□□ -0.34
PDE4D-210ENST00000503258 TIAM1Q13009 1591 aa12.94□□□□□ -0.34
PDE4D-210ENST00000503258 P3H3Q8IVL6 736 aa12.93□□□□□ -0.34
PDE4D-210ENST00000503258 MAP3K1Q13233 1512 aa12.93□□□□□ -0.34
PDE4D-210ENST00000503258 VWDEQ8N2E2 1590 aa12.92□□□□□ -0.34
PDE4D-210ENST00000503258 MBD5Q9P267 1494 aa12.91□□□□□ -0.34
PDE4D-210ENST00000503258 ZMYM3Q14202 1370 aa12.9□□□□□ -0.34
PDE4D-210ENST00000503258 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.89□□□□□ -0.35
PDE4D-210ENST00000503258 HNRNPUL2Q1KMD3 747 aaKnown RBP12.89□□□□□ -0.35
PDE4D-210ENST00000503258 RSPH4AQ5TD94 716 aa12.89□□□□□ -0.35
PDE4D-210ENST00000503258 IQGAP1P46940 1657 aa12.86□□□□□ -0.35
PDE4D-210ENST00000503258 HSPA2P54652 639 aa12.86□□□□□ -0.35
PDE4D-210ENST00000503258 MED1Q15648 1581 aaPredicted RBP12.86□□□□□ -0.35
PDE4D-210ENST00000503258 DHX29Q7Z478 1369 aaKnown RBP12.85□□□□□ -0.35
PDE4D-210ENST00000503258 ALKQ9UM73 1620 aa12.85□□□□□ -0.35
PDE4D-210ENST00000503258 NCOA2Q15596 1464 aa12.84□□□□□ -0.35
PDE4D-210ENST00000503258 CCDC141Q6ZP82 1450 aa12.84□□□□□ -0.35
PDE4D-210ENST00000503258 SLIT1O75093 1534 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms