RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 LOC105371045A0A1W2PR82 267 aa9.21□□□□□ -0.94
CLCN3-203ENST00000502998 PITPNM1O00562 1244 aa9.21□□□□□ -0.94
CLCN3-203ENST00000502998 RBM10P98175 930 aaKnown RBP9.21□□□□□ -0.94
CLCN3-203ENST00000502998 FOXD4L1Q9NU39 408 aa9.21□□□□□ -0.94
CLCN3-203ENST00000502998 BCCIPQ9P287 314 aaKnown RBP eCLIP9.21□□□□□ -0.94
CLCN3-203ENST00000502998 WRNQ14191 1432 aaPredicted RBP eCLIP9.2□□□□□ -0.94
CLCN3-203ENST00000502998 ZMYND15Q9H091 742 aa9.19□□□□□ -0.94
CLCN3-203ENST00000502998 DEKP35659 375 aaKnown RBP9.18□□□□□ -0.94
CLCN3-203ENST00000502998 HAP1P54257 671 aaPredicted RBP9.18□□□□□ -0.94
CLCN3-203ENST00000502998 ILDR1Q86SU0 546 aaPredicted RBP9.18□□□□□ -0.94
CLCN3-203ENST00000502998 KIF13AQ9H1H9 1805 aa9.18□□□□□ -0.94
CLCN3-203ENST00000502998 ADAMTS12P58397 1594 aa9.17□□□□□ -0.94
CLCN3-203ENST00000502998 KDM4FA0A1W2PPD8 638 aa9.17□□□□□ -0.94
CLCN3-203ENST00000502998 DHX37Q8IY37 1157 aaKnown RBP9.17□□□□□ -0.94
CLCN3-203ENST00000502998 GRIN2AQ12879 1464 aa9.16□□□□□ -0.94
CLCN3-203ENST00000502998 A0A0U1RQG5 324 aaPredicted RBP9.16□□□□□ -0.94
CLCN3-203ENST00000502998 NAP1L5Q96NT1 182 aaPredicted RBP9.16□□□□□ -0.94
CLCN3-203ENST00000502998 CEP170Q5SW79 1584 aa9.16□□□□□ -0.94
CLCN3-203ENST00000502998 HMGB1P09429 215 aaKnown RBP9.15□□□□□ -0.94
CLCN3-203ENST00000502998 NUP160Q12769 1436 aa9.14□□□□□ -0.95
CLCN3-203ENST00000502998 SLC4A1APQ9BWU0 796 aaKnown RBP9.13□□□□□ -0.95
CLCN3-203ENST00000502998 FHAD1B1AJZ9 1412 aa9.13□□□□□ -0.95
CLCN3-203ENST00000502998 ERICH3Q5RHP9 1530 aa9.12□□□□□ -0.95
CLCN3-203ENST00000502998 SHROOM2Q13796 1616 aa9.11□□□□□ -0.95
CLCN3-203ENST00000502998 TMEM132AQ24JP5 1023 aa9.09□□□□□ -0.95
CLCN3-203ENST00000502998 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.08□□□□□ -0.96
CLCN3-203ENST00000502998 EVX2Q03828 476 aa9.07□□□□□ -0.96
CLCN3-203ENST00000502998 FAM69CQ0P6D2 419 aa9.07□□□□□ -0.96
CLCN3-203ENST00000502998 TRIM26Q12899 539 aaPredicted RBP9.07□□□□□ -0.96
CLCN3-203ENST00000502998 VSIG10Q8N0Z9 540 aa9.07□□□□□ -0.96
CLCN3-203ENST00000502998 ABCC10Q5T3U5 1492 aa9.07□□□□□ -0.96
CLCN3-203ENST00000502998 PAXIP1Q6ZW49 1069 aaPredicted RBP9.06□□□□□ -0.96
CLCN3-203ENST00000502998 PRG4Q92954 1404 aaPredicted RBP9.05□□□□□ -0.96
CLCN3-203ENST00000502998 YTHDC1Q96MU7 727 aaKnown RBP9.05□□□□□ -0.96
CLCN3-203ENST00000502998 DIP2BQ9P265 1576 aa9.04□□□□□ -0.96
CLCN3-203ENST00000502998 RUSC2Q8N2Y8 1516 aa9.04□□□□□ -0.96
CLCN3-203ENST00000502998 JPH4Q96JJ6 628 aa9.03□□□□□ -0.96
CLCN3-203ENST00000502998 SPDYE2BA6NHP3 402 aa9.02□□□□□ -0.97
CLCN3-203ENST00000502998 SPDYE6P0CI01 402 aa9.02□□□□□ -0.97
CLCN3-203ENST00000502998 SPDYE2Q495Y8 402 aa9.02□□□□□ -0.97
CLCN3-203ENST00000502998 KIF27Q86VH2 1401 aa9.02□□□□□ -0.97
CLCN3-203ENST00000502998 FANCIQ9NVI1 1328 aa9.02□□□□□ -0.97
CLCN3-203ENST00000502998 IGF1RP08069 1367 aa9.01□□□□□ -0.97
CLCN3-203ENST00000502998 ADCY10Q96PN6 1610 aa9.01□□□□□ -0.97
CLCN3-203ENST00000502998 CUL7Q14999 1698 aa9□□□□□ -0.97
CLCN3-203ENST00000502998 MAPKBP1O60336 1514 aa9□□□□□ -0.97
CLCN3-203ENST00000502998 TSPOAP1O95153 1857 aa9□□□□□ -0.97
CLCN3-203ENST00000502998 IPO4Q8TEX9 1081 aaKnown RBP9□□□□□ -0.97
CLCN3-203ENST00000502998 ARID3AQ99856 593 aa9□□□□□ -0.97
CLCN3-203ENST00000502998 NAP1L2Q9ULW6 460 aaPredicted RBP9□□□□□ -0.97
CLCN3-203ENST00000502998 SUPT16HQ9Y5B9 1047 aaKnown RBP9□□□□□ -0.97
CLCN3-203ENST00000502998 KDM6BO15054 1643 aa8.99□□□□□ -0.97
CLCN3-203ENST00000502998 ATXN8OSP0DMR3 200 aa8.99□□□□□ -0.97
CLCN3-203ENST00000502998 DIEXFQ68CQ4 756 aaKnown RBP8.98□□□□□ -0.97
CLCN3-203ENST00000502998 KIAA0586Q9BVV6 1533 aa8.98□□□□□ -0.97
CLCN3-203ENST00000502998 TEX2Q8IWB9 1127 aa8.97□□□□□ -0.97
CLCN3-203ENST00000502998 CCER1Q8TC90 406 aaPredicted RBP8.97□□□□□ -0.97
CLCN3-203ENST00000502998 COL17A1Q9UMD9 1497 aaPredicted RBP8.96□□□□□ -0.97
CLCN3-203ENST00000502998 PRKAR2AP13861 404 aaKnown RBP8.96□□□□□ -0.98
CLCN3-203ENST00000502998 CARMIL1Q5VZK9 1371 aa8.96□□□□□ -0.98
CLCN3-203ENST00000502998 CHRM1P11229 460 aaPredicted RBP8.95□□□□□ -0.98
CLCN3-203ENST00000502998 ADGRL1O94910 1474 aa8.95□□□□□ -0.98
CLCN3-203ENST00000502998 PLCB2Q00722 1185 aa8.94□□□□□ -0.98
CLCN3-203ENST00000502998 SPDYE1Q8NFV5 336 aaPredicted RBP8.94□□□□□ -0.98
CLCN3-203ENST00000502998 CCDC9Q9Y3X0 531 aaKnown RBP8.94□□□□□ -0.98
CLCN3-203ENST00000502998 RBM19Q9Y4C8 960 aaKnown RBP8.94□□□□□ -0.98
CLCN3-203ENST00000502998 PPRC1Q5VV67 1664 aaKnown RBP8.94□□□□□ -0.98
CLCN3-203ENST00000502998 C19orf67A6NJJ6 358 aa8.93□□□□□ -0.98
CLCN3-203ENST00000502998 C11orf95C9JLR9 678 aaPredicted RBP8.93□□□□□ -0.98
CLCN3-203ENST00000502998 ZBTB22O15209 634 aa8.93□□□□□ -0.98
CLCN3-203ENST00000502998 NPM1P06748 294 aaKnown RBP eCLIP8.93□□□□□ -0.98
CLCN3-203ENST00000502998 HECW2Q9P2P5 1572 aa8.93□□□□□ -0.98
CLCN3-203ENST00000502998 POLR3GLQ9BT43 218 aa8.92□□□□□ -0.98
CLCN3-203ENST00000502998 CLEC11AQ9Y240 323 aa8.92□□□□□ -0.98
CLCN3-203ENST00000502998 NCLP19338 710 aaKnown RBP8.91□□□□□ -0.98
CLCN3-203ENST00000502998 TICAM2Q86XR7 235 aa8.91□□□□□ -0.98
CLCN3-203ENST00000502998 RRP9O43818 475 aaKnown RBP8.9□□□□□ -0.98
CLCN3-203ENST00000502998 IQGAP2Q13576 1575 aa8.9□□□□□ -0.99
CLCN3-203ENST00000502998 PTPRGP23470 1445 aa8.89□□□□□ -0.99
CLCN3-203ENST00000502998 ARID4BQ4LE39 1312 aaPredicted RBP8.88□□□□□ -0.99
CLCN3-203ENST00000502998 FTSJ3Q8IY81 847 aaKnown RBP8.88□□□□□ -0.99
CLCN3-203ENST00000502998 RAPGEF2Q9Y4G8 1499 aa8.88□□□□□ -0.99
CLCN3-203ENST00000502998 CARMIL2Q6F5E8 1435 aa8.88□□□□□ -0.99
CLCN3-203ENST00000502998 TNIKQ9UKE5 1360 aa8.87□□□□□ -0.99
CLCN3-203ENST00000502998 IL27Q8NEV9 243 aa8.87□□□□□ -0.99
CLCN3-203ENST00000502998 ZFP91Q96JP5 570 aaPredicted RBP8.87□□□□□ -0.99
CLCN3-203ENST00000502998 PUS7Q96PZ0 661 aaKnown RBP8.87□□□□□ -0.99
CLCN3-203ENST00000502998 SSUH2Q9Y2M2 353 aa8.87□□□□□ -0.99
CLCN3-203ENST00000502998 ASXL2Q76L83 1435 aa8.87□□□□□ -0.99
CLCN3-203ENST00000502998 DISP1Q96F81 1524 aa8.86□□□□□ -0.99
CLCN3-203ENST00000502998 GABBR2O75899 941 aa8.86□□□□□ -0.99
CLCN3-203ENST00000502998 CLSTN1O94985 981 aa8.86□□□□□ -0.99
CLCN3-203ENST00000502998 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.86□□□□□ -0.99
CLCN3-203ENST00000502998 ABCC2Q92887 1545 aa8.85□□□□□ -0.99
CLCN3-203ENST00000502998 LHX8Q68G74 356 aa8.85□□□□□ -0.99
CLCN3-203ENST00000502998 GLI2P10070 1586 aa8.85□□□□□ -0.99
CLCN3-203ENST00000502998 UGGT2Q9NYU1 1516 aa8.85□□□□□ -0.99
CLCN3-203ENST00000502998 CANXP27824 592 aaKnown RBP8.84□□□□□ -0.99
CLCN3-203ENST00000502998 MKRN4PQ13434 485 aaPredicted RBP8.84□□□□□ -0.99
CLCN3-203ENST00000502998 CNGB1Q14028 1251 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms