RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 CFAP74Q9C0B2 1584 aa17.57■□□□□ 0.4
SNCA-207ENST00000502987 HECW2Q9P2P5 1572 aa17.57■□□□□ 0.4
SNCA-207ENST00000502987 FANCAO15360 1455 aa17.56■□□□□ 0.4
SNCA-207ENST00000502987 CDK11AQ9UQ88 783 aaPredicted RBP17.56■□□□□ 0.4
SNCA-207ENST00000502987 DENND4BO75064 1496 aaPredicted RBP17.56■□□□□ 0.4
SNCA-207ENST00000502987 TTC37Q6PGP7 1564 aa17.54■□□□□ 0.4
SNCA-207ENST00000502987 ARHGAP35Q9NRY4 1499 aa17.54■□□□□ 0.4
SNCA-207ENST00000502987 HECW1Q76N89 1606 aa17.54■□□□□ 0.4
SNCA-207ENST00000502987 FRMPD1Q5SYB0 1578 aa17.53■□□□□ 0.4
SNCA-207ENST00000502987 RICTORQ6R327 1708 aa17.51■□□□□ 0.39
SNCA-207ENST00000502987 ADAMTSL3P82987 1691 aa17.48■□□□□ 0.39
SNCA-207ENST00000502987 BCORL1Q5H9F3 1711 aa17.48■□□□□ 0.39
SNCA-207ENST00000502987 EFCAB2Q5VUJ9 269 aa17.48■□□□□ 0.39
SNCA-207ENST00000502987 PLCH2O75038 1416 aa17.47■□□□□ 0.39
SNCA-207ENST00000502987 MYO5CQ9NQX4 1742 aa17.47■□□□□ 0.39
SNCA-207ENST00000502987 PTPRMP28827 1452 aa17.47■□□□□ 0.39
SNCA-207ENST00000502987 SCAPERQ9BY12 1400 aa17.47■□□□□ 0.39
SNCA-207ENST00000502987 ARHGEF40Q8TER5 1519 aa17.46■□□□□ 0.39
SNCA-207ENST00000502987 MYT1LQ9UL68 1186 aa17.45■□□□□ 0.38
SNCA-207ENST00000502987 MADDQ8WXG6 1647 aa17.45■□□□□ 0.38
SNCA-207ENST00000502987 CLIP1P30622 1438 aa17.45■□□□□ 0.38
SNCA-207ENST00000502987 MLECQ14165 292 aa17.44■□□□□ 0.38
SNCA-207ENST00000502987 ILDR1Q86SU0 546 aaPredicted RBP17.44■□□□□ 0.38
SNCA-207ENST00000502987 KIF14Q15058 1648 aa17.43■□□□□ 0.38
SNCA-207ENST00000502987 ZFYVE16Q7Z3T8 1539 aa17.43■□□□□ 0.38
SNCA-207ENST00000502987 POGZQ7Z3K3 1410 aa17.43■□□□□ 0.38
SNCA-207ENST00000502987 TROQ12816 1431 aaPredicted RBP17.42■□□□□ 0.38
SNCA-207ENST00000502987 RIMS1Q86UR5 1692 aaKnown RBP17.42■□□□□ 0.38
SNCA-207ENST00000502987 LRRIQ1Q96JM4 1722 aa17.41■□□□□ 0.38
SNCA-207ENST00000502987 YEATS2Q9ULM3 1422 aa17.41■□□□□ 0.38
SNCA-207ENST00000502987 ARHGAP5Q13017 1502 aa17.41■□□□□ 0.38
SNCA-207ENST00000502987 ZMYM4Q5VZL5 1548 aa17.41■□□□□ 0.38
SNCA-207ENST00000502987 MAGI2Q86UL8 1455 aa17.4■□□□□ 0.38
SNCA-207ENST00000502987 CASKIN1Q8WXD9 1431 aa17.37■□□□□ 0.37
SNCA-207ENST00000502987 PCF11O94913 1555 aaKnown RBP17.36■□□□□ 0.37
SNCA-207ENST00000502987 CCDC18Q5T9S5 1454 aa17.36■□□□□ 0.37
SNCA-207ENST00000502987 AFAP1Q8N556 730 aa17.35■□□□□ 0.37
SNCA-207ENST00000502987 ATP10AO60312 1499 aa17.34■□□□□ 0.37
SNCA-207ENST00000502987 SIGLEC1Q9BZZ2 1709 aa17.33■□□□□ 0.37
SNCA-207ENST00000502987 CDC42BPBQ9Y5S2 1711 aa17.33■□□□□ 0.37
SNCA-207ENST00000502987 ZNF518AQ6AHZ1 1483 aa17.32■□□□□ 0.36
SNCA-207ENST00000502987 FER1L4A9Z1Z3 1794 aa17.32■□□□□ 0.36
SNCA-207ENST00000502987 C9orf84Q5VXU9 1444 aa17.31■□□□□ 0.36
SNCA-207ENST00000502987 ZNF777Q9ULD5 760 aaPredicted RBP17.31■□□□□ 0.36
SNCA-207ENST00000502987 FYCO1Q9BQS8 1478 aa17.3■□□□□ 0.36
SNCA-207ENST00000502987 HSPA2P54652 639 aa17.28■□□□□ 0.36
SNCA-207ENST00000502987 PREX2Q70Z35 1606 aa17.28■□□□□ 0.36
SNCA-207ENST00000502987 KCNA4P22459 653 aa17.27■□□□□ 0.36
SNCA-207ENST00000502987 LMTK3Q96Q04 1460 aa17.26■□□□□ 0.35
SNCA-207ENST00000502987 CDC42BPAQ5VT25 1732 aa17.26■□□□□ 0.35
SNCA-207ENST00000502987 ESF1Q9H501 851 aaKnown RBP17.25■□□□□ 0.35
SNCA-207ENST00000502987 KDM5CP41229 1560 aa17.24■□□□□ 0.35
SNCA-207ENST00000502987 CEBPAP49715 358 aaPredicted RBP17.24■□□□□ 0.35
SNCA-207ENST00000502987 U3KPZ7 1027 aaPredicted RBP17.24■□□□□ 0.35
SNCA-207ENST00000502987 ITSN2Q9NZM3 1697 aa17.23■□□□□ 0.35
SNCA-207ENST00000502987 TRAPPC8Q9Y2L5 1435 aa17.23■□□□□ 0.35
SNCA-207ENST00000502987 ABCC1P33527 1531 aa17.21■□□□□ 0.35
SNCA-207ENST00000502987 ARHGEF12Q9NZN5 1544 aa17.21■□□□□ 0.35
SNCA-207ENST00000502987 DIP2CQ9Y2E4 1556 aa17.21■□□□□ 0.35
SNCA-207ENST00000502987 MLH3Q9UHC1 1453 aa17.2■□□□□ 0.34
SNCA-207ENST00000502987 MTUS2Q5JR59 1369 aa17.2■□□□□ 0.34
SNCA-207ENST00000502987 HNRNPMP52272 730 aaKnown RBP eCLIP17.2■□□□□ 0.34
SNCA-207ENST00000502987 ABCA6Q8N139 1617 aa17.2■□□□□ 0.34
SNCA-207ENST00000502987 CFDP1Q9UEE9 299 aaPredicted RBP17.19■□□□□ 0.34
SNCA-207ENST00000502987 CCNB3Q8WWL7 1395 aa17.18■□□□□ 0.34
SNCA-207ENST00000502987 FBXO41Q8TF61 875 aa17.18■□□□□ 0.34
SNCA-207ENST00000502987 SPAG9O60271 1321 aaKnown RBP17.17■□□□□ 0.34
SNCA-207ENST00000502987 GPATCH8Q9UKJ3 1502 aaKnown RBP17.16■□□□□ 0.34
SNCA-207ENST00000502987 KIDINS220Q9ULH0 1771 aa17.16■□□□□ 0.34
SNCA-207ENST00000502987 PREX1Q8TCU6 1659 aa17.16■□□□□ 0.34
SNCA-207ENST00000502987 SAMD9LQ8IVG5 1584 aa17.15■□□□□ 0.34
SNCA-207ENST00000502987 SETD1BQ9UPS6 1966 aaKnown RBP17.15■□□□□ 0.34
SNCA-207ENST00000502987 SYCP2Q9BX26 1530 aa17.15■□□□□ 0.34
SNCA-207ENST00000502987 REREQ9P2R6 1566 aa17.15■□□□□ 0.34
SNCA-207ENST00000502987 CEP162Q5TB80 1403 aa17.13■□□□□ 0.33
SNCA-207ENST00000502987 AGLP35573 1532 aa17.11■□□□□ 0.33
SNCA-207ENST00000502987 SUPT6HQ7KZ85 1726 aaKnown RBP17.11■□□□□ 0.33
SNCA-207ENST00000502987 UHRF1BP1Q6BDS2 1440 aa17.11■□□□□ 0.33
SNCA-207ENST00000502987 PLEKHH2Q8IVE3 1493 aa17.11■□□□□ 0.33
SNCA-207ENST00000502987 C3P01024 1663 aa17.1■□□□□ 0.33
SNCA-207ENST00000502987 KIAA1107Q9UPP5 1409 aa17.08■□□□□ 0.32
SNCA-207ENST00000502987 SPINK5Q9NQ38 1064 aaPredicted RBP17.08■□□□□ 0.32
SNCA-207ENST00000502987 ATP7AQ04656 1500 aa17.07■□□□□ 0.32
SNCA-207ENST00000502987 EHBP1L1Q8N3D4 1523 aa17.07■□□□□ 0.32
SNCA-207ENST00000502987 ZNF644Q9H582 1327 aaPredicted RBP17.07■□□□□ 0.32
SNCA-207ENST00000502987 LOC105371045A0A1W2PR82 267 aa17.06■□□□□ 0.32
SNCA-207ENST00000502987 GGT6Q6P531 493 aa17.06■□□□□ 0.32
SNCA-207ENST00000502987 CNTLNQ9NXG0 1405 aa17.05■□□□□ 0.32
SNCA-207ENST00000502987 CERKQ8TCT0 537 aa17.05■□□□□ 0.32
SNCA-207ENST00000502987 TIAM1Q13009 1591 aa17.04■□□□□ 0.32
SNCA-207ENST00000502987 CAPN15O75808 1086 aa17.04■□□□□ 0.32
SNCA-207ENST00000502987 A2MP01023 1474 aa17.03■□□□□ 0.32
SNCA-207ENST00000502987 STRCQ7RTU9 1775 aa17.02■□□□□ 0.31
SNCA-207ENST00000502987 INO80Q9ULG1 1556 aaPredicted RBP17.02■□□□□ 0.31
SNCA-207ENST00000502987 ZMYM3Q14202 1370 aa17.01■□□□□ 0.31
SNCA-207ENST00000502987 CLTCQ00610 1675 aaKnown RBP17.01■□□□□ 0.31
SNCA-207ENST00000502987 MROH2AA6NES4 1674 aa17■□□□□ 0.31
SNCA-207ENST00000502987 ADGBQ8N7X0 1667 aa17■□□□□ 0.31
SNCA-207ENST00000502987 SLC4A2P04920 1241 aa16.98■□□□□ 0.31
SNCA-207ENST00000502987 NCOA2Q15596 1464 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms