RNA–Protein interactions for RNA: ENST00000502944.1

MATR3-204, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 362 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-204ENST00000502944 SMARCA2P51531 1590 aa11.02□□□□□ -0.65
MATR3-204ENST00000502944 L3MBTL3Q96JM7 780 aaPredicted RBP11.01□□□□□ -0.65
MATR3-204ENST00000502944 PEG3Q9GZU2 1588 aa11□□□□□ -0.65
MATR3-204ENST00000502944 POTEJP0CG39 1038 aa11□□□□□ -0.65
MATR3-204ENST00000502944 MAMSTRQ6ZN01 415 aa11□□□□□ -0.65
MATR3-204ENST00000502944 MFRPQ9BY79 579 aa11□□□□□ -0.65
MATR3-204ENST00000502944 SCUBE2Q9NQ36 999 aa11□□□□□ -0.65
MATR3-204ENST00000502944 BICRAQ9NZM4 1560 aa10.99□□□□□ -0.65
MATR3-204ENST00000502944 ILDR1Q86SU0 546 aaPredicted RBP10.97□□□□□ -0.65
MATR3-204ENST00000502944 UNC13AQ9UPW8 1703 aa10.97□□□□□ -0.65
MATR3-204ENST00000502944 BAZ1BQ9UIG0 1483 aaKnown RBP10.96□□□□□ -0.65
MATR3-204ENST00000502944 ATAD2BQ9ULI0 1458 aa10.96□□□□□ -0.65
MATR3-204ENST00000502944 OTUD5Q96G74 571 aa10.96□□□□□ -0.65
MATR3-204ENST00000502944 MS4A4AQ96JQ5 239 aa10.96□□□□□ -0.65
MATR3-204ENST00000502944 BOLA1Q9Y3E2 137 aa10.95□□□□□ -0.66
MATR3-204ENST00000502944 C3orf67Q6ZVT6 689 aa10.94□□□□□ -0.66
MATR3-204ENST00000502944 FBXO22Q8NEZ5 403 aa10.94□□□□□ -0.66
MATR3-204ENST00000502944 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.93□□□□□ -0.66
MATR3-204ENST00000502944 NKX1-1Q15270 411 aaPredicted RBP10.92□□□□□ -0.66
MATR3-204ENST00000502944 UBTFP17480 764 aaKnown RBP10.91□□□□□ -0.66
MATR3-204ENST00000502944 SLAIN1Q8ND83 568 aa10.9□□□□□ -0.66
MATR3-204ENST00000502944 WRNQ14191 1432 aaPredicted RBP eCLIP10.9□□□□□ -0.66
MATR3-204ENST00000502944 BBXQ8WY36 941 aaPredicted RBP10.89□□□□□ -0.67
MATR3-204ENST00000502944 DNAJC5Q9H3Z4 198 aa10.89□□□□□ -0.67
MATR3-204ENST00000502944 RYDENQ9NUL5 291 aaKnown RBP10.89□□□□□ -0.67
MATR3-204ENST00000502944 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.88□□□□□ -0.67
MATR3-204ENST00000502944 TNIKQ9UKE5 1360 aa10.88□□□□□ -0.67
MATR3-204ENST00000502944 NCAPD3P42695 1498 aa10.87□□□□□ -0.67
MATR3-204ENST00000502944 PPP1R37O75864 691 aa10.87□□□□□ -0.67
MATR3-204ENST00000502944 MICALL2Q8IY33 904 aa10.87□□□□□ -0.67
MATR3-204ENST00000502944 EIF4G1Q04637 1599 aaKnown RBP10.83□□□□□ -0.68
MATR3-204ENST00000502944 GTPBP6O43824 516 aaPredicted RBP10.83□□□□□ -0.68
MATR3-204ENST00000502944 CFAP44Q96MT7 982 aa10.82□□□□□ -0.68
MATR3-204ENST00000502944 TMEM121BQ9BXQ6 578 aaPredicted RBP10.82□□□□□ -0.68
MATR3-204ENST00000502944 SPRYD3Q8NCJ5 442 aa10.8□□□□□ -0.68
MATR3-204ENST00000502944 GOLGA3Q08378 1498 aa10.8□□□□□ -0.68
MATR3-204ENST00000502944 HMGXB3Q12766 1538 aa10.79□□□□□ -0.68
MATR3-204ENST00000502944 PAXIP1Q6ZW49 1069 aaPredicted RBP10.79□□□□□ -0.68
MATR3-204ENST00000502944 CEP164Q9UPV0 1460 aa10.78□□□□□ -0.68
MATR3-204ENST00000502944 ABCC8Q09428 1581 aa10.77□□□□□ -0.68
MATR3-204ENST00000502944 SOGA1O94964 1423 aa10.75□□□□□ -0.69
MATR3-204ENST00000502944 FAM163AQ96GL9 167 aaPredicted RBP10.74□□□□□ -0.69
MATR3-204ENST00000502944 CEP162Q5TB80 1403 aa10.73□□□□□ -0.69
MATR3-204ENST00000502944 TMEM92Q6UXU6 159 aa10.72□□□□□ -0.69
MATR3-204ENST00000502944 TMC2Q8TDI7 906 aa10.72□□□□□ -0.69
MATR3-204ENST00000502944 SNPHO15079 494 aa10.7□□□□□ -0.7
MATR3-204ENST00000502944 CFTRP13569 1480 aa10.68□□□□□ -0.7
MATR3-204ENST00000502944 KIF27Q86VH2 1401 aa10.68□□□□□ -0.7
MATR3-204ENST00000502944 C2orf72A6NCS6 295 aa10.68□□□□□ -0.7
MATR3-204ENST00000502944 CADPSQ9ULU8 1353 aa10.67□□□□□ -0.7
MATR3-204ENST00000502944 CCER1Q8TC90 406 aaPredicted RBP10.67□□□□□ -0.7
MATR3-204ENST00000502944 KIF21BO75037 1637 aa10.64□□□□□ -0.71
MATR3-204ENST00000502944 TOP2BQ02880 1626 aa10.64□□□□□ -0.71
MATR3-204ENST00000502944 CLIP1P30622 1438 aa10.64□□□□□ -0.71
MATR3-204ENST00000502944 ZNF710Q8N1W2 664 aa10.63□□□□□ -0.71
MATR3-204ENST00000502944 PDE4AP27815 886 aa10.62□□□□□ -0.71
MATR3-204ENST00000502944 DOK7Q18PE1 504 aa10.61□□□□□ -0.71
MATR3-204ENST00000502944 GPHNQ9NQX3 736 aaPredicted RBP10.61□□□□□ -0.71
MATR3-204ENST00000502944 RUSC2Q8N2Y8 1516 aa10.61□□□□□ -0.71
MATR3-204ENST00000502944 SYNJ1O43426 1573 aa10.6□□□□□ -0.71
MATR3-204ENST00000502944 KIF3CO14782 793 aa10.6□□□□□ -0.71
MATR3-204ENST00000502944 PPARGC1BQ86YN6 1023 aaKnown RBP10.6□□□□□ -0.71
MATR3-204ENST00000502944 LARP6Q9BRS8 491 aaKnown RBP10.6□□□□□ -0.71
MATR3-204ENST00000502944 ST18O60284 1047 aa10.59□□□□□ -0.71
MATR3-204ENST00000502944 RIMBP2O15034 1052 aa10.58□□□□□ -0.72
MATR3-204ENST00000502944 CADPS2Q86UW7 1296 aa10.58□□□□□ -0.72
MATR3-204ENST00000502944 ERICH3Q5RHP9 1530 aa10.58□□□□□ -0.72
MATR3-204ENST00000502944 DSG2Q14126 1118 aa10.57□□□□□ -0.72
MATR3-204ENST00000502944 PLPP6Q8IY26 295 aa10.57□□□□□ -0.72
MATR3-204ENST00000502944 BIVM-ERCC5R4GMW8 1640 aa10.57□□□□□ -0.72
MATR3-204ENST00000502944 VPS8Q8N3P4 1428 aa10.57□□□□□ -0.72
MATR3-204ENST00000502944 HOXB3P14651 431 aaPredicted RBP10.56□□□□□ -0.72
MATR3-204ENST00000502944 NCKAP5LQ9HCH0 1330 aa10.56□□□□□ -0.72
MATR3-204ENST00000502944 FOXK1P85037 733 aa10.55□□□□□ -0.72
MATR3-204ENST00000502944 CRISPLD2Q9H0B8 497 aa10.55□□□□□ -0.72
MATR3-204ENST00000502944 PRXQ9BXM0 1461 aa10.55□□□□□ -0.72
MATR3-204ENST00000502944 PLCB2Q00722 1185 aa10.53□□□□□ -0.72
MATR3-204ENST00000502944 DDX27Q96GQ7 796 aaKnown RBP10.53□□□□□ -0.72
MATR3-204ENST00000502944 PPP1R15BQ5SWA1 713 aa10.52□□□□□ -0.73
MATR3-204ENST00000502944 MARVELD3Q96A59 401 aa10.52□□□□□ -0.73
MATR3-204ENST00000502944 TSHZ2Q9NRE2 1034 aa10.52□□□□□ -0.73
MATR3-204ENST00000502944 RAPGEF2Q9Y4G8 1499 aa10.52□□□□□ -0.73
MATR3-204ENST00000502944 CUX1P39880 1505 aa10.5□□□□□ -0.73
MATR3-204ENST00000502944 RANGAP1P46060 587 aaPredicted RBP10.5□□□□□ -0.73
MATR3-204ENST00000502944 LCE2DQ5TA82 110 aaPredicted RBP10.5□□□□□ -0.73
MATR3-204ENST00000502944 WDR70Q9NW82 654 aa10.5□□□□□ -0.73
MATR3-204ENST00000502944 CARMIL1Q5VZK9 1371 aa10.5□□□□□ -0.73
MATR3-204ENST00000502944 ARSIQ5FYB1 569 aa10.49□□□□□ -0.73
MATR3-204ENST00000502944 IGF1RP08069 1367 aa10.49□□□□□ -0.73
MATR3-204ENST00000502944 PDS5BQ9NTI5 1447 aa10.49□□□□□ -0.73
MATR3-204ENST00000502944 CC2D2AQ9P2K1 1620 aa10.48□□□□□ -0.73
MATR3-204ENST00000502944 POTEMA6NI47 508 aa10.48□□□□□ -0.73
MATR3-204ENST00000502944 HAP1P54257 671 aaPredicted RBP10.48□□□□□ -0.73
MATR3-204ENST00000502944 POTEGQ6S5H5 508 aa10.48□□□□□ -0.73
MATR3-204ENST00000502944 EMP3P54852 163 aa10.47□□□□□ -0.73
MATR3-204ENST00000502944 UPF1Q92900 1129 aaKnown RBP eCLIP10.47□□□□□ -0.73
MATR3-204ENST00000502944 ZSWIM6Q9HCJ5 1215 aa10.47□□□□□ -0.73
MATR3-204ENST00000502944 TTBK1Q5TCY1 1321 aaPredicted RBP10.47□□□□□ -0.73
MATR3-204ENST00000502944 CLSPNQ9HAW4 1339 aa10.47□□□□□ -0.73
MATR3-204ENST00000502944 CUX2O14529 1486 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms