RNA–Protein interactions for RNA: ENST00000502727.5

PRDM2-212, Transcript of PR/SET domain 2, humanhuman

TSL 4

Gene PRDM2, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-212ENST00000502727 PHLDB1Q86UU1 1377 aa16.26■□□□□ 0.19
PRDM2-212ENST00000502727 CDK13Q14004 1512 aaKnown RBP16.25■□□□□ 0.19
PRDM2-212ENST00000502727 ARAP3Q8WWN8 1544 aa16.24■□□□□ 0.19
PRDM2-212ENST00000502727 ATP1B4Q9UN42 357 aaPredicted RBP16.24■□□□□ 0.19
PRDM2-212ENST00000502727 LRRIQ1Q96JM4 1722 aa16.22■□□□□ 0.19
PRDM2-212ENST00000502727 NEO1Q92859 1461 aa16.22■□□□□ 0.19
PRDM2-212ENST00000502727 CDK11AQ9UQ88 783 aaPredicted RBP16.21■□□□□ 0.19
PRDM2-212ENST00000502727 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.2■□□□□ 0.18
PRDM2-212ENST00000502727 CLIP1P30622 1438 aa16.19■□□□□ 0.18
PRDM2-212ENST00000502727 KDM4FA0A1W2PPD8 638 aa16.18■□□□□ 0.18
PRDM2-212ENST00000502727 CACNB1Q02641 598 aaPredicted RBP16.18■□□□□ 0.18
PRDM2-212ENST00000502727 CASKIN1Q8WXD9 1431 aa16.18■□□□□ 0.18
PRDM2-212ENST00000502727 TTC37Q6PGP7 1564 aa16.17■□□□□ 0.18
PRDM2-212ENST00000502727 PCF11O94913 1555 aaKnown RBP16.16■□□□□ 0.18
PRDM2-212ENST00000502727 CFAP74Q9C0B2 1584 aa16.16■□□□□ 0.18
PRDM2-212ENST00000502727 MYO5CQ9NQX4 1742 aa16.14■□□□□ 0.17
PRDM2-212ENST00000502727 FANCAO15360 1455 aa16.14■□□□□ 0.17
PRDM2-212ENST00000502727 TROQ12816 1431 aaPredicted RBP16.13■□□□□ 0.17
PRDM2-212ENST00000502727 CCDC18Q5T9S5 1454 aa16.13■□□□□ 0.17
PRDM2-212ENST00000502727 PLCH2O75038 1416 aa16.12■□□□□ 0.17
PRDM2-212ENST00000502727 AKNAQ7Z591 1439 aa16.12■□□□□ 0.17
PRDM2-212ENST00000502727 FYCO1Q9BQS8 1478 aa16.12■□□□□ 0.17
PRDM2-212ENST00000502727 KIF14Q15058 1648 aa16.12■□□□□ 0.17
PRDM2-212ENST00000502727 ADGRL1O94910 1474 aa16.11■□□□□ 0.17
PRDM2-212ENST00000502727 RAPGEF3O95398 923 aa16.11■□□□□ 0.17
PRDM2-212ENST00000502727 SPINK5Q9NQ38 1064 aaPredicted RBP16.11■□□□□ 0.17
PRDM2-212ENST00000502727 RICTORQ6R327 1708 aa16.11■□□□□ 0.17
PRDM2-212ENST00000502727 FRMPD1Q5SYB0 1578 aa16.1■□□□□ 0.17
PRDM2-212ENST00000502727 ZNF219Q9P2Y4 722 aaPredicted RBP16.1■□□□□ 0.17
PRDM2-212ENST00000502727 DENND4BO75064 1496 aaPredicted RBP16.09■□□□□ 0.17
PRDM2-212ENST00000502727 CAPN15O75808 1086 aa16.08■□□□□ 0.16
PRDM2-212ENST00000502727 ATF5Q9Y2D1 282 aaPredicted RBP16.07■□□□□ 0.16
PRDM2-212ENST00000502727 CEP162Q5TB80 1403 aa16.06■□□□□ 0.16
PRDM2-212ENST00000502727 EFCAB2Q5VUJ9 269 aa16.06■□□□□ 0.16
PRDM2-212ENST00000502727 CDC42BPBQ9Y5S2 1711 aa16.05■□□□□ 0.16
PRDM2-212ENST00000502727 SCAPERQ9BY12 1400 aa16.02■□□□□ 0.16
PRDM2-212ENST00000502727 ARHGAP5Q13017 1502 aa16.02■□□□□ 0.15
PRDM2-212ENST00000502727 ZMYM4Q5VZL5 1548 aa16.02■□□□□ 0.15
PRDM2-212ENST00000502727 LOC105371045A0A1W2PR82 267 aa16.01■□□□□ 0.15
PRDM2-212ENST00000502727 CDC42BPAQ5VT25 1732 aa16.01■□□□□ 0.15
PRDM2-212ENST00000502727 PREX2Q70Z35 1606 aa16.01■□□□□ 0.15
PRDM2-212ENST00000502727 ARHGEF40Q8TER5 1519 aa16■□□□□ 0.15
PRDM2-212ENST00000502727 MAGI2Q86UL8 1455 aa15.99■□□□□ 0.15
PRDM2-212ENST00000502727 POGZQ7Z3K3 1410 aa15.99■□□□□ 0.15
PRDM2-212ENST00000502727 ADAMTSL3P82987 1691 aa15.97■□□□□ 0.15
PRDM2-212ENST00000502727 ZFYVE16Q7Z3T8 1539 aa15.97■□□□□ 0.15
PRDM2-212ENST00000502727 BCORL1Q5H9F3 1711 aa15.96■□□□□ 0.15
PRDM2-212ENST00000502727 ARID4BQ4LE39 1312 aaPredicted RBP15.94■□□□□ 0.14
PRDM2-212ENST00000502727 YEATS2Q9ULM3 1422 aa15.94■□□□□ 0.14
PRDM2-212ENST00000502727 MTUS2Q5JR59 1369 aa15.94■□□□□ 0.14
PRDM2-212ENST00000502727 ZNF518AQ6AHZ1 1483 aa15.94■□□□□ 0.14
PRDM2-212ENST00000502727 ITSN2Q9NZM3 1697 aa15.93■□□□□ 0.14
PRDM2-212ENST00000502727 KDM5CP41229 1560 aa15.92■□□□□ 0.14
PRDM2-212ENST00000502727 AFAP1Q8N556 730 aa15.92■□□□□ 0.14
PRDM2-212ENST00000502727 ABCC1P33527 1531 aa15.92■□□□□ 0.14
PRDM2-212ENST00000502727 GPATCH8Q9UKJ3 1502 aaKnown RBP15.92■□□□□ 0.14
PRDM2-212ENST00000502727 EHBP1L1Q8N3D4 1523 aa15.91■□□□□ 0.14
PRDM2-212ENST00000502727 ATP10AO60312 1499 aa15.91■□□□□ 0.14
PRDM2-212ENST00000502727 SIGLEC1Q9BZZ2 1709 aa15.9■□□□□ 0.14
PRDM2-212ENST00000502727 CCNB3Q8WWL7 1395 aa15.89■□□□□ 0.13
PRDM2-212ENST00000502727 HECW2Q9P2P5 1572 aa15.89■□□□□ 0.13
PRDM2-212ENST00000502727 VPS8Q8N3P4 1428 aa15.89■□□□□ 0.13
PRDM2-212ENST00000502727 ARHGEF12Q9NZN5 1544 aa15.89■□□□□ 0.13
PRDM2-212ENST00000502727 MADDQ8WXG6 1647 aa15.88■□□□□ 0.13
PRDM2-212ENST00000502727 SAMD9LQ8IVG5 1584 aa15.87■□□□□ 0.13
PRDM2-212ENST00000502727 C9orf84Q5VXU9 1444 aa15.87■□□□□ 0.13
PRDM2-212ENST00000502727 TRAPPC8Q9Y2L5 1435 aa15.87■□□□□ 0.13
PRDM2-212ENST00000502727 PTPRMP28827 1452 aa15.87■□□□□ 0.13
PRDM2-212ENST00000502727 MLH3Q9UHC1 1453 aa15.87■□□□□ 0.13
PRDM2-212ENST00000502727 CFDP1Q9UEE9 299 aaPredicted RBP15.87■□□□□ 0.13
PRDM2-212ENST00000502727 MYT1LQ9UL68 1186 aa15.87■□□□□ 0.13
PRDM2-212ENST00000502727 ZNF777Q9ULD5 760 aaPredicted RBP15.87■□□□□ 0.13
PRDM2-212ENST00000502727 TIAM1Q13009 1591 aa15.86■□□□□ 0.13
PRDM2-212ENST00000502727 RIMS1Q86UR5 1692 aaKnown RBP15.86■□□□□ 0.13
PRDM2-212ENST00000502727 SUPT6HQ7KZ85 1726 aaKnown RBP15.85■□□□□ 0.13
PRDM2-212ENST00000502727 PLEKHH2Q8IVE3 1493 aa15.85■□□□□ 0.13
PRDM2-212ENST00000502727 DIP2CQ9Y2E4 1556 aa15.84■□□□□ 0.13
PRDM2-212ENST00000502727 DSG3P32926 999 aa15.84■□□□□ 0.13
PRDM2-212ENST00000502727 KIDINS220Q9ULH0 1771 aa15.84■□□□□ 0.13
PRDM2-212ENST00000502727 KIAA1107Q9UPP5 1409 aa15.84■□□□□ 0.13
PRDM2-212ENST00000502727 FER1L4A9Z1Z3 1794 aa15.83■□□□□ 0.12
PRDM2-212ENST00000502727 SYCP2Q9BX26 1530 aa15.83■□□□□ 0.12
PRDM2-212ENST00000502727 REREQ9P2R6 1566 aa15.83■□□□□ 0.12
PRDM2-212ENST00000502727 ABCA6Q8N139 1617 aa15.83■□□□□ 0.12
PRDM2-212ENST00000502727 HNRNPMP52272 730 aaKnown RBP eCLIP15.81■□□□□ 0.12
PRDM2-212ENST00000502727 MAP3K1Q13233 1512 aa15.81■□□□□ 0.12
PRDM2-212ENST00000502727 MLECQ14165 292 aa15.81■□□□□ 0.12
PRDM2-212ENST00000502727 NCOA2Q15596 1464 aa15.8■□□□□ 0.12
PRDM2-212ENST00000502727 SETD1BQ9UPS6 1966 aaKnown RBP15.78■□□□□ 0.12
PRDM2-212ENST00000502727 LRRC9Q6ZRR7 1453 aa15.78■□□□□ 0.12
PRDM2-212ENST00000502727 SPAG9O60271 1321 aaKnown RBP15.78■□□□□ 0.12
PRDM2-212ENST00000502727 AGLP35573 1532 aa15.78■□□□□ 0.12
PRDM2-212ENST00000502727 ZNF644Q9H582 1327 aaPredicted RBP15.76■□□□□ 0.11
PRDM2-212ENST00000502727 POLA2Q14181 598 aa15.76■□□□□ 0.11
PRDM2-212ENST00000502727 ATP7AQ04656 1500 aa15.75■□□□□ 0.11
PRDM2-212ENST00000502727 INO80Q9ULG1 1556 aaPredicted RBP15.75■□□□□ 0.11
PRDM2-212ENST00000502727 MBD5Q9P267 1494 aa15.74■□□□□ 0.11
PRDM2-212ENST00000502727 ABCB7O75027 752 aa15.73■□□□□ 0.11
PRDM2-212ENST00000502727 KANK4Q5T7N3 995 aaPredicted RBP15.73■□□□□ 0.11
PRDM2-212ENST00000502727 ILDR1Q86SU0 546 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms