RNA–Protein interactions for RNA: ENST00000502669.5

SH3TC1-206, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 1 (best)

Gene SH3TC1, Length 3,484 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-206ENST00000502669 NBPF8Q3BBV2 869 aa20.66■□□□□ 0.9
SH3TC1-206ENST00000502669 PKD2Q13563 968 aa20.65■□□□□ 0.9
SH3TC1-206ENST00000502669 JPH4Q96JJ6 628 aa20.65■□□□□ 0.9
SH3TC1-206ENST00000502669 TARBP1Q13395 1621 aaKnown RBP20.64■□□□□ 0.9
SH3TC1-206ENST00000502669 PRG4Q92954 1404 aaPredicted RBP20.64■□□□□ 0.89
SH3TC1-206ENST00000502669 C11orf95C9JLR9 678 aaPredicted RBP20.64■□□□□ 0.89
SH3TC1-206ENST00000502669 CCDC184Q52MB2 194 aa20.64■□□□□ 0.89
SH3TC1-206ENST00000502669 TSPY4P0CV99 314 aa20.63■□□□□ 0.89
SH3TC1-206ENST00000502669 TSPY10P0CW01 314 aa20.63■□□□□ 0.89
SH3TC1-206ENST00000502669 LRRIQ1Q96JM4 1722 aa20.62■□□□□ 0.89
SH3TC1-206ENST00000502669 MIA2Q96PC5 1412 aa20.62■□□□□ 0.89
SH3TC1-206ENST00000502669 DAPK1P53355 1430 aa20.6■□□□□ 0.89
SH3TC1-206ENST00000502669 IFT140Q96RY7 1462 aa20.59■□□□□ 0.89
SH3TC1-206ENST00000502669 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.58■□□□□ 0.89
SH3TC1-206ENST00000502669 ADAMTS12P58397 1594 aa20.58■□□□□ 0.88
SH3TC1-206ENST00000502669 KIAA0586Q9BVV6 1533 aa20.57■□□□□ 0.88
SH3TC1-206ENST00000502669 PBRM1Q86U86 1689 aa20.56■□□□□ 0.88
SH3TC1-206ENST00000502669 ABCC5O15440 1437 aa20.56■□□□□ 0.88
SH3TC1-206ENST00000502669 KDM6BO15054 1643 aa20.56■□□□□ 0.88
SH3TC1-206ENST00000502669 PRKRIP1Q9H875 184 aaPredicted RBP20.56■□□□□ 0.88
SH3TC1-206ENST00000502669 PLB1Q6P1J6 1458 aa20.55■□□□□ 0.88
SH3TC1-206ENST00000502669 HNRNPMP52272 730 aaKnown RBP eCLIP20.54■□□□□ 0.885e-8■■■■□ 19.4
SH3TC1-206ENST00000502669 WDR62O43379 1518 aa20.54■□□□□ 0.88
SH3TC1-206ENST00000502669 CCDC7Q96M83 1385 aa20.54■□□□□ 0.88
SH3TC1-206ENST00000502669 TCOF1Q13428 1488 aaKnown RBP20.53■□□□□ 0.88
SH3TC1-206ENST00000502669 CARMIL2Q6F5E8 1435 aa20.53■□□□□ 0.88
SH3TC1-206ENST00000502669 RGL3Q3MIN7 710 aa20.53■□□□□ 0.88
SH3TC1-206ENST00000502669 NUP155O75694 1391 aa20.52■□□□□ 0.88
SH3TC1-206ENST00000502669 NUP153P49790 1475 aaKnown RBP20.52■□□□□ 0.87
SH3TC1-206ENST00000502669 KIF7Q2M1P5 1343 aa20.52■□□□□ 0.87
SH3TC1-206ENST00000502669 CARD11Q9BXL7 1154 aa20.51■□□□□ 0.87
SH3TC1-206ENST00000502669 GRIN2AQ12879 1464 aa20.51■□□□□ 0.87
SH3TC1-206ENST00000502669 ANKRD30BQ9BXX2 1392 aa20.51■□□□□ 0.87
SH3TC1-206ENST00000502669 ANKRD30AQ9BXX3 1397 aa20.49■□□□□ 0.87
SH3TC1-206ENST00000502669 CNTLNQ9NXG0 1405 aa20.49■□□□□ 0.87
SH3TC1-206ENST00000502669 DCAF11Q8TEB1 546 aa20.49■□□□□ 0.87
SH3TC1-206ENST00000502669 SALL2Q9Y467 1007 aaPredicted RBP20.48■□□□□ 0.87
SH3TC1-206ENST00000502669 RBM19Q9Y4C8 960 aaKnown RBP20.48■□□□□ 0.87
SH3TC1-206ENST00000502669 ANP32EQ9BTT0 268 aa20.48■□□□□ 0.87
SH3TC1-206ENST00000502669 ARHGEF11O15085 1522 aa20.48■□□□□ 0.87
SH3TC1-206ENST00000502669 TROQ12816 1431 aaPredicted RBP20.48■□□□□ 0.87
SH3TC1-206ENST00000502669 DISP1Q96F81 1524 aa20.47■□□□□ 0.87
SH3TC1-206ENST00000502669 ERICH6Q7L0X2 663 aa20.46■□□□□ 0.87
SH3TC1-206ENST00000502669 TMC1Q8TDI8 760 aa20.46■□□□□ 0.87
SH3TC1-206ENST00000502669 DENND4BO75064 1496 aaPredicted RBP20.45■□□□□ 0.86
SH3TC1-206ENST00000502669 ROCK1Q13464 1354 aa20.45■□□□□ 0.86
SH3TC1-206ENST00000502669 AKNAQ7Z591 1439 aa20.44■□□□□ 0.86
SH3TC1-206ENST00000502669 MYT1LQ9UL68 1186 aa20.44■□□□□ 0.86
SH3TC1-206ENST00000502669 B4GALNT3Q6L9W6 998 aa20.43■□□□□ 0.86
SH3TC1-206ENST00000502669 KIAA0556O60303 1618 aa20.43■□□□□ 0.86
SH3TC1-206ENST00000502669 CAMSAP2Q08AD1 1489 aa20.42■□□□□ 0.86
SH3TC1-206ENST00000502669 USP47Q96K76 1375 aa20.42■□□□□ 0.86
SH3TC1-206ENST00000502669 RPRD2Q5VT52 1461 aaKnown RBP20.41■□□□□ 0.86
SH3TC1-206ENST00000502669 ANKRD50Q9ULJ7 1429 aa20.41■□□□□ 0.86
SH3TC1-206ENST00000502669 RAPGEF6Q8TEU7 1601 aa20.4■□□□□ 0.86
SH3TC1-206ENST00000502669 NCOA1Q15788 1441 aa20.39■□□□□ 0.86
SH3TC1-206ENST00000502669 KDM5BQ9UGL1 1544 aa20.38■□□□□ 0.85
SH3TC1-206ENST00000502669 GCC2Q8IWJ2 1684 aa20.38■□□□□ 0.85
SH3TC1-206ENST00000502669 PRKCSHP14314 528 aaPredicted RBP20.37■□□□□ 0.85
SH3TC1-206ENST00000502669 ST20-MTHFSA0A0A6YYL1 179 aa20.37■□□□□ 0.85
SH3TC1-206ENST00000502669 GPATCH8Q9UKJ3 1502 aaKnown RBP20.37■□□□□ 0.85
SH3TC1-206ENST00000502669 EIF4G3O43432 1585 aaKnown RBP20.36■□□□□ 0.85
SH3TC1-206ENST00000502669 KIAA1107Q9UPP5 1409 aa20.34■□□□□ 0.85
SH3TC1-206ENST00000502669 SYNJ2O15056 1496 aa20.34■□□□□ 0.85
SH3TC1-206ENST00000502669 PPP4R2Q9NY27 417 aa20.33■□□□□ 0.85
SH3TC1-206ENST00000502669 PTPRGP23470 1445 aa20.32■□□□□ 0.84
SH3TC1-206ENST00000502669 KIF15Q9NS87 1388 aa20.31■□□□□ 0.84
SH3TC1-206ENST00000502669 DNMT1P26358 1616 aaKnown RBP20.31■□□□□ 0.84
SH3TC1-206ENST00000502669 MAGI1Q96QZ7 1491 aaPredicted RBP20.3■□□□□ 0.84
SH3TC1-206ENST00000502669 C9orf84Q5VXU9 1444 aa20.3■□□□□ 0.84
SH3TC1-206ENST00000502669 ZBED9Q6R2W3 1325 aa20.29■□□□□ 0.84
SH3TC1-206ENST00000502669 PZPP20742 1482 aa20.28■□□□□ 0.84
SH3TC1-206ENST00000502669 TEX14Q8IWB6 1497 aa20.28■□□□□ 0.84
SH3TC1-206ENST00000502669 KIF14Q15058 1648 aa20.28■□□□□ 0.84
SH3TC1-206ENST00000502669 ROCK2O75116 1388 aaKnown RBP20.27■□□□□ 0.84
SH3TC1-206ENST00000502669 CCDC136Q96JN2 1154 aa20.25■□□□□ 0.83
SH3TC1-206ENST00000502669 CEP170Q5SW79 1584 aa20.25■□□□□ 0.83
SH3TC1-206ENST00000502669 CC2D1BQ5T0F9 858 aaKnown RBP20.23■□□□□ 0.83
SH3TC1-206ENST00000502669 ATP10BO94823 1461 aa20.23■□□□□ 0.83
SH3TC1-206ENST00000502669 NBPF1Q3BBV0 1214 aa20.19■□□□□ 0.82
SH3TC1-206ENST00000502669 SPATA31E1Q6ZUB1 1445 aa20.17■□□□□ 0.82
SH3TC1-206ENST00000502669 NUDCQ9Y266 331 aa20.17■□□□□ 0.82
SH3TC1-206ENST00000502669 CCDC144AA2RUR9 1427 aa20.16■□□□□ 0.82
SH3TC1-206ENST00000502669 ITSN2Q9NZM3 1697 aa20.15■□□□□ 0.82
SH3TC1-206ENST00000502669 NUP160Q12769 1436 aa20.13■□□□□ 0.81
SH3TC1-206ENST00000502669 ERICH6BQ5W0A0 696 aa20.12■□□□□ 0.81
SH3TC1-206ENST00000502669 PNISRQ8TF01 805 aaKnown RBP20.11■□□□□ 0.81
SH3TC1-206ENST00000502669 RSPH4AQ5TD94 716 aa20.1■□□□□ 0.81
SH3TC1-206ENST00000502669 DHX29Q7Z478 1369 aaKnown RBP20.1■□□□□ 0.81
SH3TC1-206ENST00000502669 ARHGAP5Q13017 1502 aa20.08■□□□□ 0.81
SH3TC1-206ENST00000502669 MYBBP1AQ9BQG0 1328 aaKnown RBP20.08■□□□□ 0.81
SH3TC1-206ENST00000502669 ADGRL2O95490 1459 aa20.08■□□□□ 0.8
SH3TC1-206ENST00000502669 RALBP1Q15311 655 aa20.07■□□□□ 0.8
SH3TC1-206ENST00000502669 KTN1Q86UP2 1357 aaKnown RBP20.06■□□□□ 0.8
SH3TC1-206ENST00000502669 EFCAB2Q5VUJ9 269 aa20.06■□□□□ 0.8
SH3TC1-206ENST00000502669 ARID4BQ4LE39 1312 aaPredicted RBP20.05■□□□□ 0.8
SH3TC1-206ENST00000502669 PANK3Q9H999 370 aa20.05■□□□□ 0.8
SH3TC1-206ENST00000502669 CCDC141Q6ZP82 1450 aa20.04■□□□□ 0.8
SH3TC1-206ENST00000502669 MSH5O43196 834 aa20.04■□□□□ 0.8
SH3TC1-206ENST00000502669 CHGAP10645 457 aaKnown RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms