RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 MYO5CQ9NQX4 1742 aa16.99■□□□□ 0.31
UBE2D3-212ENST00000502563 MTUS2Q5JR59 1369 aa16.99■□□□□ 0.31
UBE2D3-212ENST00000502563 FANCAO15360 1455 aa16.99■□□□□ 0.31
UBE2D3-212ENST00000502563 COL17A1Q9UMD9 1497 aaPredicted RBP16.97■□□□□ 0.31
UBE2D3-212ENST00000502563 PREX2Q70Z35 1606 aa16.96■□□□□ 0.31
UBE2D3-212ENST00000502563 LRRC9Q6ZRR7 1453 aa16.95■□□□□ 0.3
UBE2D3-212ENST00000502563 AKNAQ7Z591 1439 aa16.94■□□□□ 0.3
UBE2D3-212ENST00000502563 EFCAB2Q5VUJ9 269 aa16.93■□□□□ 0.3
UBE2D3-212ENST00000502563 GPATCH8Q9UKJ3 1502 aaKnown RBP16.92■□□□□ 0.3
UBE2D3-212ENST00000502563 SUPT6HQ7KZ85 1726 aaKnown RBP16.92■□□□□ 0.3
UBE2D3-212ENST00000502563 CDC42BPBQ9Y5S2 1711 aa16.92■□□□□ 0.3
UBE2D3-212ENST00000502563 CDC42BPAQ5VT25 1732 aa16.91■□□□□ 0.3
UBE2D3-212ENST00000502563 ARHGAP5Q13017 1502 aa16.9■□□□□ 0.3
UBE2D3-212ENST00000502563 ITSN2Q9NZM3 1697 aa16.89■□□□□ 0.29
UBE2D3-212ENST00000502563 DENND4BO75064 1496 aaPredicted RBP16.89■□□□□ 0.29
UBE2D3-212ENST00000502563 ADGRL1O94910 1474 aa16.88■□□□□ 0.29
UBE2D3-212ENST00000502563 NCOA2Q15596 1464 aa16.88■□□□□ 0.29
UBE2D3-212ENST00000502563 ZMYM4Q5VZL5 1548 aa16.88■□□□□ 0.29
UBE2D3-212ENST00000502563 CCNB3Q8WWL7 1395 aa16.88■□□□□ 0.29
UBE2D3-212ENST00000502563 RICTORQ6R327 1708 aa16.87■□□□□ 0.29
UBE2D3-212ENST00000502563 MAGI2Q86UL8 1455 aa16.87■□□□□ 0.29
UBE2D3-212ENST00000502563 PLEKHH2Q8IVE3 1493 aa16.87■□□□□ 0.29
UBE2D3-212ENST00000502563 FRMPD1Q5SYB0 1578 aa16.87■□□□□ 0.29
UBE2D3-212ENST00000502563 POGZQ7Z3K3 1410 aa16.87■□□□□ 0.29
UBE2D3-212ENST00000502563 KIAA1107Q9UPP5 1409 aa16.87■□□□□ 0.29
UBE2D3-212ENST00000502563 APLP2Q06481 763 aa16.86■□□□□ 0.29
UBE2D3-212ENST00000502563 ABCC1P33527 1531 aa16.86■□□□□ 0.29
UBE2D3-212ENST00000502563 ZNF518AQ6AHZ1 1483 aa16.85■□□□□ 0.29
UBE2D3-212ENST00000502563 SCAPERQ9BY12 1400 aa16.84■□□□□ 0.29
UBE2D3-212ENST00000502563 KDM5CP41229 1560 aa16.84■□□□□ 0.29
UBE2D3-212ENST00000502563 MIA2Q96PC5 1412 aa16.82■□□□□ 0.28
UBE2D3-212ENST00000502563 KANK4Q5T7N3 995 aaPredicted RBP16.82■□□□□ 0.28
UBE2D3-212ENST00000502563 SAMD9LQ8IVG5 1584 aa16.81■□□□□ 0.28
UBE2D3-212ENST00000502563 CFDP1Q9UEE9 299 aaPredicted RBP16.81■□□□□ 0.28
UBE2D3-212ENST00000502563 MLH3Q9UHC1 1453 aa16.79■□□□□ 0.28
UBE2D3-212ENST00000502563 MYOM3Q5VTT5 1437 aa16.79■□□□□ 0.28
UBE2D3-212ENST00000502563 RAPGEF3O95398 923 aa16.78■□□□□ 0.28
UBE2D3-212ENST00000502563 ARHGEF40Q8TER5 1519 aa16.78■□□□□ 0.28
UBE2D3-212ENST00000502563 ARHGEF12Q9NZN5 1544 aa16.77■□□□□ 0.28
UBE2D3-212ENST00000502563 RSPH4AQ5TD94 716 aa16.76■□□□□ 0.27
UBE2D3-212ENST00000502563 MBD5Q9P267 1494 aa16.75■□□□□ 0.27
UBE2D3-212ENST00000502563 SYCP2Q9BX26 1530 aa16.75■□□□□ 0.27
UBE2D3-212ENST00000502563 HECW2Q9P2P5 1572 aa16.74■□□□□ 0.27
UBE2D3-212ENST00000502563 ZFYVE16Q7Z3T8 1539 aa16.74■□□□□ 0.27
UBE2D3-212ENST00000502563 REREQ9P2R6 1566 aa16.73■□□□□ 0.27
UBE2D3-212ENST00000502563 TRAPPC8Q9Y2L5 1435 aa16.73■□□□□ 0.27
UBE2D3-212ENST00000502563 ARHGEF5Q12774 1597 aa16.72■□□□□ 0.27
UBE2D3-212ENST00000502563 CAMSAP2Q08AD1 1489 aa16.72■□□□□ 0.27
UBE2D3-212ENST00000502563 RTEL1-TNFRSF6BF6WH68 1400 aa16.7■□□□□ 0.26
UBE2D3-212ENST00000502563 TCOF1Q13428 1488 aaKnown RBP16.69■□□□□ 0.26
UBE2D3-212ENST00000502563 CCDC141Q6ZP82 1450 aa16.69■□□□□ 0.26
UBE2D3-212ENST00000502563 AFAP1Q8N556 730 aa16.69■□□□□ 0.26
UBE2D3-212ENST00000502563 FGD6Q6ZV73 1430 aa16.69■□□□□ 0.26
UBE2D3-212ENST00000502563 INO80Q9ULG1 1556 aaPredicted RBP16.68■□□□□ 0.26
UBE2D3-212ENST00000502563 ATP10AO60312 1499 aa16.68■□□□□ 0.26
UBE2D3-212ENST00000502563 YEATS2Q9ULM3 1422 aa16.68■□□□□ 0.26
UBE2D3-212ENST00000502563 KIDINS220Q9ULH0 1771 aa16.67■□□□□ 0.26
UBE2D3-212ENST00000502563 ZNF777Q9ULD5 760 aaPredicted RBP16.67■□□□□ 0.26
UBE2D3-212ENST00000502563 C9orf84Q5VXU9 1444 aa16.67■□□□□ 0.26
UBE2D3-212ENST00000502563 DIP2CQ9Y2E4 1556 aa16.66■□□□□ 0.26
UBE2D3-212ENST00000502563 ATP7AQ04656 1500 aa16.65■□□□□ 0.26
UBE2D3-212ENST00000502563 MAST1Q9Y2H9 1570 aa16.65■□□□□ 0.26
UBE2D3-212ENST00000502563 ZNF644Q9H582 1327 aaPredicted RBP16.65■□□□□ 0.26
UBE2D3-212ENST00000502563 AGLP35573 1532 aa16.65■□□□□ 0.26
UBE2D3-212ENST00000502563 PTPN23Q9H3S7 1636 aa16.64■□□□□ 0.25
UBE2D3-212ENST00000502563 HNRNPMP52272 730 aaKnown RBP eCLIP16.64■□□□□ 0.254e-13■■■■■ 32.7
UBE2D3-212ENST00000502563 SPAG9O60271 1321 aaKnown RBP16.64■□□□□ 0.25
UBE2D3-212ENST00000502563 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.64■□□□□ 0.25
UBE2D3-212ENST00000502563 SHANK2Q9UPX8 1470 aa16.63■□□□□ 0.25
UBE2D3-212ENST00000502563 ABCA6Q8N139 1617 aa16.63■□□□□ 0.25
UBE2D3-212ENST00000502563 PLXNC1O60486 1568 aa16.6■□□□□ 0.25
UBE2D3-212ENST00000502563 BCORL1Q5H9F3 1711 aa16.59■□□□□ 0.25
UBE2D3-212ENST00000502563 DNMT1P26358 1616 aaKnown RBP16.59■□□□□ 0.25
UBE2D3-212ENST00000502563 ADGBQ8N7X0 1667 aa16.59■□□□□ 0.25
UBE2D3-212ENST00000502563 ADAMTSL3P82987 1691 aa16.58■□□□□ 0.24
UBE2D3-212ENST00000502563 TSPY4P0CV99 314 aa16.57■□□□□ 0.24
UBE2D3-212ENST00000502563 TSPY10P0CW01 314 aa16.57■□□□□ 0.24
UBE2D3-212ENST00000502563 SIGLEC1Q9BZZ2 1709 aa16.56■□□□□ 0.24
UBE2D3-212ENST00000502563 CROCC2H7BZ55 1655 aa16.56■□□□□ 0.24
UBE2D3-212ENST00000502563 KDM4FA0A1W2PPD8 638 aa16.56■□□□□ 0.24
UBE2D3-212ENST00000502563 A2MP01023 1474 aa16.55■□□□□ 0.24
UBE2D3-212ENST00000502563 ABCC5O15440 1437 aa16.55■□□□□ 0.24
UBE2D3-212ENST00000502563 DAPK1P53355 1430 aa16.55■□□□□ 0.24
UBE2D3-212ENST00000502563 RRBP1Q9P2E9 1410 aaKnown RBP16.55■□□□□ 0.24
UBE2D3-212ENST00000502563 DHX29Q7Z478 1369 aaKnown RBP16.53■□□□□ 0.24
UBE2D3-212ENST00000502563 FAM135AQ9P2D6 1515 aa16.53■□□□□ 0.24
UBE2D3-212ENST00000502563 ADGRL2O95490 1459 aa16.52■□□□□ 0.23
UBE2D3-212ENST00000502563 MYT1LQ9UL68 1186 aa16.5■□□□□ 0.23
UBE2D3-212ENST00000502563 EIF2AK4Q9P2K8 1649 aaKnown RBP16.49■□□□□ 0.23
UBE2D3-212ENST00000502563 DUOX2Q9NRD8 1548 aa16.49■□□□□ 0.23
UBE2D3-212ENST00000502563 ARID4BQ4LE39 1312 aaPredicted RBP16.48■□□□□ 0.23
UBE2D3-212ENST00000502563 NCOA1Q15788 1441 aa16.47■□□□□ 0.23
UBE2D3-212ENST00000502563 CNTLNQ9NXG0 1405 aa16.47■□□□□ 0.23
UBE2D3-212ENST00000502563 ROCK1Q13464 1354 aa16.47■□□□□ 0.23
UBE2D3-212ENST00000502563 ERBINQ96RT1 1412 aa16.46■□□□□ 0.23
UBE2D3-212ENST00000502563 MADDQ8WXG6 1647 aa16.46■□□□□ 0.23
UBE2D3-212ENST00000502563 ANKRD30AQ9BXX3 1397 aa16.46■□□□□ 0.23
UBE2D3-212ENST00000502563 PTPRMP28827 1452 aa16.45■□□□□ 0.22
UBE2D3-212ENST00000502563 FER1L4A9Z1Z3 1794 aa16.44■□□□□ 0.22
UBE2D3-212ENST00000502563 KIF15Q9NS87 1388 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms