RNA–Protein interactions for RNA: ENST00000502557.5

CCHCR1-216, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-216ENST00000502557 NCOA2Q15596 1464 aa27.93■■■□□ 2.06
CCHCR1-216ENST00000502557 MYO5CQ9NQX4 1742 aa27.92■■■□□ 2.06
CCHCR1-216ENST00000502557 CFAP74Q9C0B2 1584 aa27.9■■■□□ 2.06
CCHCR1-216ENST00000502557 PREX2Q70Z35 1606 aa27.89■■■□□ 2.05
CCHCR1-216ENST00000502557 RAPGEF3O95398 923 aa27.88■■■□□ 2.05
CCHCR1-216ENST00000502557 ADGRL1O94910 1474 aa27.87■■■□□ 2.05
CCHCR1-216ENST00000502557 SCAPERQ9BY12 1400 aa27.86■■■□□ 2.05
CCHCR1-216ENST00000502557 CFDP1Q9UEE9 299 aaPredicted RBP27.86■■■□□ 2.05
CCHCR1-216ENST00000502557 SUPT6HQ7KZ85 1726 aaKnown RBP27.86■■■□□ 2.05
CCHCR1-216ENST00000502557 DENND4BO75064 1496 aaPredicted RBP27.85■■■□□ 2.05
CCHCR1-216ENST00000502557 CDC42BPBQ9Y5S2 1711 aa27.84■■■□□ 2.05
CCHCR1-216ENST00000502557 ZNF777Q9ULD5 760 aaPredicted RBP27.83■■■□□ 2.05
CCHCR1-216ENST00000502557 CDC42BPAQ5VT25 1732 aa27.83■■■□□ 2.05
CCHCR1-216ENST00000502557 FRMPD1Q5SYB0 1578 aa27.78■■■□□ 2.04
CCHCR1-216ENST00000502557 POGZQ7Z3K3 1410 aa27.78■■■□□ 2.04
CCHCR1-216ENST00000502557 ABCC1P33527 1531 aa27.76■■■□□ 2.03
CCHCR1-216ENST00000502557 ARHGEF12Q9NZN5 1544 aa27.76■■■□□ 2.03
CCHCR1-216ENST00000502557 ZNF644Q9H582 1327 aaPredicted RBP27.75■■■□□ 2.03
CCHCR1-216ENST00000502557 SAMD9LQ8IVG5 1584 aa27.75■■■□□ 2.03
CCHCR1-216ENST00000502557 MYOM3Q5VTT5 1437 aa27.73■■■□□ 2.03
CCHCR1-216ENST00000502557 ITSN2Q9NZM3 1697 aa27.72■■■□□ 2.03
CCHCR1-216ENST00000502557 KIAA1107Q9UPP5 1409 aa27.72■■■□□ 2.03
CCHCR1-216ENST00000502557 TRAPPC8Q9Y2L5 1435 aa27.72■■■□□ 2.03
CCHCR1-216ENST00000502557 AFAP1Q8N556 730 aa27.71■■■□□ 2.03
CCHCR1-216ENST00000502557 PLEKHH2Q8IVE3 1493 aa27.7■■■□□ 2.03
CCHCR1-216ENST00000502557 HNRNPMP52272 730 aaKnown RBP eCLIP27.7■■■□□ 2.02
CCHCR1-216ENST00000502557 ZNF518AQ6AHZ1 1483 aa27.7■■■□□ 2.02
CCHCR1-216ENST00000502557 RICTORQ6R327 1708 aa27.7■■■□□ 2.02
CCHCR1-216ENST00000502557 SYCP2Q9BX26 1530 aa27.68■■■□□ 2.02
CCHCR1-216ENST00000502557 PPARGC1BQ86YN6 1023 aaKnown RBP27.68■■■□□ 2.02
CCHCR1-216ENST00000502557 MIA2Q96PC5 1412 aa27.67■■■□□ 2.02
CCHCR1-216ENST00000502557 ZMYM4Q5VZL5 1548 aa27.67■■■□□ 2.02
CCHCR1-216ENST00000502557 CAMSAP2Q08AD1 1489 aa27.64■■■□□ 2.02
CCHCR1-216ENST00000502557 MBD5Q9P267 1494 aa27.64■■■□□ 2.01
CCHCR1-216ENST00000502557 KDM5CP41229 1560 aa27.63■■■□□ 2.01
CCHCR1-216ENST00000502557 MAGI2Q86UL8 1455 aa27.63■■■□□ 2.01
CCHCR1-216ENST00000502557 YEATS2Q9ULM3 1422 aa27.61■■■□□ 2.01
CCHCR1-216ENST00000502557 FGD6Q6ZV73 1430 aa27.59■■■□□ 2.01
CCHCR1-216ENST00000502557 ZFYVE16Q7Z3T8 1539 aa27.58■■■□□ 2.01
CCHCR1-216ENST00000502557 MLH3Q9UHC1 1453 aa27.57■■■□□ 2
CCHCR1-216ENST00000502557 ARHGEF40Q8TER5 1519 aa27.57■■■□□ 2
CCHCR1-216ENST00000502557 MYT1LQ9UL68 1186 aa27.55■■■□□ 2
CCHCR1-216ENST00000502557 SPAG9O60271 1321 aaKnown RBP27.55■■■□□ 2
CCHCR1-216ENST00000502557 RSPH4AQ5TD94 716 aa27.54■■■□□ 2
CCHCR1-216ENST00000502557 HECW2Q9P2P5 1572 aa27.52■■■□□ 2
CCHCR1-216ENST00000502557 TCOF1Q13428 1488 aaKnown RBP27.52■■■□□ 2
CCHCR1-216ENST00000502557 CCDC141Q6ZP82 1450 aa27.51■■■□□ 2
CCHCR1-216ENST00000502557 PTPN23Q9H3S7 1636 aa27.5■■□□□ 1.99
CCHCR1-216ENST00000502557 ARHGEF5Q12774 1597 aa27.49■■□□□ 1.99
CCHCR1-216ENST00000502557 ATP10AO60312 1499 aa27.49■■□□□ 1.99
CCHCR1-216ENST00000502557 RTEL1-TNFRSF6BF6WH68 1400 aa27.45■■□□□ 1.98
CCHCR1-216ENST00000502557 C9orf84Q5VXU9 1444 aa27.45■■□□□ 1.98
CCHCR1-216ENST00000502557 ATP7AQ04656 1500 aa27.45■■□□□ 1.98
CCHCR1-216ENST00000502557 DIP2CQ9Y2E4 1556 aa27.44■■□□□ 1.98
CCHCR1-216ENST00000502557 INO80Q9ULG1 1556 aaPredicted RBP27.43■■□□□ 1.98
CCHCR1-216ENST00000502557 TSPY4P0CV99 314 aa27.43■■□□□ 1.98
CCHCR1-216ENST00000502557 TSPY10P0CW01 314 aa27.43■■□□□ 1.98
CCHCR1-216ENST00000502557 FAM50AQ14320 339 aaKnown RBP27.43■■□□□ 1.98
CCHCR1-216ENST00000502557 KIDINS220Q9ULH0 1771 aa27.43■■□□□ 1.98
CCHCR1-216ENST00000502557 ABCA6Q8N139 1617 aa27.42■■□□□ 1.98
CCHCR1-216ENST00000502557 ARID4BQ4LE39 1312 aaPredicted RBP27.41■■□□□ 1.98
CCHCR1-216ENST00000502557 ABCC5O15440 1437 aa27.41■■□□□ 1.98
CCHCR1-216ENST00000502557 KDM4FA0A1W2PPD8 638 aa27.4■■□□□ 1.98
CCHCR1-216ENST00000502557 DAPK1P53355 1430 aa27.38■■□□□ 1.97
CCHCR1-216ENST00000502557 REREQ9P2R6 1566 aa27.35■■□□□ 1.97
CCHCR1-216ENST00000502557 AEBP2Q6ZN18 517 aaPredicted RBP27.35■■□□□ 1.97
CCHCR1-216ENST00000502557 MAST1Q9Y2H9 1570 aa27.34■■□□□ 1.97
CCHCR1-216ENST00000502557 SIGLEC1Q9BZZ2 1709 aa27.33■■□□□ 1.97
CCHCR1-216ENST00000502557 SHANK2Q9UPX8 1470 aa27.33■■□□□ 1.97
CCHCR1-216ENST00000502557 DNMT1P26358 1616 aaKnown RBP27.33■■□□□ 1.97
CCHCR1-216ENST00000502557 RRBP1Q9P2E9 1410 aaKnown RBP27.33■■□□□ 1.96
CCHCR1-216ENST00000502557 A2MP01023 1474 aa27.32■■□□□ 1.96
CCHCR1-216ENST00000502557 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.32■■□□□ 1.96
CCHCR1-216ENST00000502557 AGLP35573 1532 aa27.3■■□□□ 1.96
CCHCR1-216ENST00000502557 DHX29Q7Z478 1369 aaKnown RBP27.29■■□□□ 1.96
CCHCR1-216ENST00000502557 MLECQ14165 292 aa27.28■■□□□ 1.96
CCHCR1-216ENST00000502557 CHIC2Q9UKJ5 165 aa27.28■■□□□ 1.96
CCHCR1-216ENST00000502557 PLXNC1O60486 1568 aa27.26■■□□□ 1.95
CCHCR1-216ENST00000502557 PTPRKQ15262 1439 aa27.24■■□□□ 1.95
CCHCR1-216ENST00000502557 BCORL1Q5H9F3 1711 aa27.24■■□□□ 1.95
CCHCR1-216ENST00000502557 CROCC2H7BZ55 1655 aa27.24■■□□□ 1.95
CCHCR1-216ENST00000502557 RRP7BPQ9NSQ0 103 aa27.22■■□□□ 1.95
CCHCR1-216ENST00000502557 ADGBQ8N7X0 1667 aa27.21■■□□□ 1.95
CCHCR1-216ENST00000502557 ANKRD30AQ9BXX3 1397 aa27.21■■□□□ 1.95
CCHCR1-216ENST00000502557 KIF15Q9NS87 1388 aa27.21■■□□□ 1.95
CCHCR1-216ENST00000502557 ADAMTSL3P82987 1691 aa27.21■■□□□ 1.95
CCHCR1-216ENST00000502557 ITGAEP38570 1179 aa27.2■■□□□ 1.94
CCHCR1-216ENST00000502557 ADGRL2O95490 1459 aa27.19■■□□□ 1.94
CCHCR1-216ENST00000502557 NCOA1Q15788 1441 aa27.19■■□□□ 1.94
CCHCR1-216ENST00000502557 KIF3BO15066 747 aa27.16■■□□□ 1.94
CCHCR1-216ENST00000502557 DUOX2Q9NRD8 1548 aa27.15■■□□□ 1.94
CCHCR1-216ENST00000502557 MADDQ8WXG6 1647 aa27.14■■□□□ 1.94
CCHCR1-216ENST00000502557 GGT6Q6P531 493 aa27.13■■□□□ 1.93
CCHCR1-216ENST00000502557 ROCK1Q13464 1354 aa27.11■■□□□ 1.93
CCHCR1-216ENST00000502557 ERBINQ96RT1 1412 aa27.09■■□□□ 1.93
CCHCR1-216ENST00000502557 PTPRMP28827 1452 aa27.09■■□□□ 1.93
CCHCR1-216ENST00000502557 PPP6R1Q9UPN7 881 aa27.07■■□□□ 1.92
CCHCR1-216ENST00000502557 ESF1Q9H501 851 aaKnown RBP27.06■■□□□ 1.92
CCHCR1-216ENST00000502557 RIMS1Q86UR5 1692 aaKnown RBP27.03■■□□□ 1.92
CCHCR1-216ENST00000502557 EIF2AK4Q9P2K8 1649 aaKnown RBP27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms