RNA–Protein interactions for RNA: ENST00000502409.1

PRDM5-204, Transcript of PR/SET domain 5, humanhuman

TSL 5

Gene PRDM5, Length 1,044 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-204ENST00000502409 CFAP74Q9C0B2 1584 aa19.5■□□□□ 0.71
PRDM5-204ENST00000502409 MYO5CQ9NQX4 1742 aa19.49■□□□□ 0.71
PRDM5-204ENST00000502409 LRRC9Q6ZRR7 1453 aa19.48■□□□□ 0.71
PRDM5-204ENST00000502409 PHLDB1Q86UU1 1377 aa19.48■□□□□ 0.71
PRDM5-204ENST00000502409 NEO1Q92859 1461 aa19.47■□□□□ 0.71
PRDM5-204ENST00000502409 SUPT6HQ7KZ85 1726 aaKnown RBP19.46■□□□□ 0.71
PRDM5-204ENST00000502409 PLCH2O75038 1416 aa19.45■□□□□ 0.7
PRDM5-204ENST00000502409 PREX2Q70Z35 1606 aa19.43■□□□□ 0.7
PRDM5-204ENST00000502409 CACNB1Q02641 598 aaPredicted RBP19.43■□□□□ 0.7
PRDM5-204ENST00000502409 PPP4R3CPQ6ZMV5 832 aa19.42■□□□□ 0.7
PRDM5-204ENST00000502409 FANCAO15360 1455 aa19.41■□□□□ 0.7
PRDM5-204ENST00000502409 ITSN2Q9NZM3 1697 aa19.41■□□□□ 0.7
PRDM5-204ENST00000502409 KDM6BO15054 1643 aa19.4■□□□□ 0.7
PRDM5-204ENST00000502409 CDC42BPAQ5VT25 1732 aa19.4■□□□□ 0.7
PRDM5-204ENST00000502409 ARHGAP5Q13017 1502 aa19.38■□□□□ 0.69
PRDM5-204ENST00000502409 NCOA2Q15596 1464 aa19.38■□□□□ 0.69
PRDM5-204ENST00000502409 CCNB3Q8WWL7 1395 aa19.38■□□□□ 0.69
PRDM5-204ENST00000502409 CDC42BPBQ9Y5S2 1711 aa19.38■□□□□ 0.69
PRDM5-204ENST00000502409 EFCAB2Q5VUJ9 269 aa19.37■□□□□ 0.69
PRDM5-204ENST00000502409 GPATCH8Q9UKJ3 1502 aaKnown RBP19.36■□□□□ 0.69
PRDM5-204ENST00000502409 AKNAQ7Z591 1439 aa19.34■□□□□ 0.69
PRDM5-204ENST00000502409 DCAF8L1A6NGE4 600 aa19.34■□□□□ 0.69
PRDM5-204ENST00000502409 KANK4Q5T7N3 995 aaPredicted RBP19.34■□□□□ 0.69
PRDM5-204ENST00000502409 ADGRL1O94910 1474 aa19.31■□□□□ 0.68
PRDM5-204ENST00000502409 PLEKHH2Q8IVE3 1493 aa19.3■□□□□ 0.68
PRDM5-204ENST00000502409 HOXD11P31277 338 aaPredicted RBP19.29■□□□□ 0.68
PRDM5-204ENST00000502409 CFDP1Q9UEE9 299 aaPredicted RBP19.29■□□□□ 0.68
PRDM5-204ENST00000502409 DENND4BO75064 1496 aaPredicted RBP19.28■□□□□ 0.68
PRDM5-204ENST00000502409 ABCC1P33527 1531 aa19.28■□□□□ 0.68
PRDM5-204ENST00000502409 COL17A1Q9UMD9 1497 aaPredicted RBP19.28■□□□□ 0.68
PRDM5-204ENST00000502409 MYOM3Q5VTT5 1437 aa19.27■□□□□ 0.68
PRDM5-204ENST00000502409 MIA2Q96PC5 1412 aa19.26■□□□□ 0.67
PRDM5-204ENST00000502409 RICTORQ6R327 1708 aa19.26■□□□□ 0.67
PRDM5-204ENST00000502409 SAMD9LQ8IVG5 1584 aa19.26■□□□□ 0.67
PRDM5-204ENST00000502409 SCAPERQ9BY12 1400 aa19.25■□□□□ 0.67
PRDM5-204ENST00000502409 POGZQ7Z3K3 1410 aa19.25■□□□□ 0.67
PRDM5-204ENST00000502409 KIAA1107Q9UPP5 1409 aa19.25■□□□□ 0.67
PRDM5-204ENST00000502409 ZNF518AQ6AHZ1 1483 aa19.24■□□□□ 0.67
PRDM5-204ENST00000502409 ZMYM4Q5VZL5 1548 aa19.23■□□□□ 0.67
PRDM5-204ENST00000502409 FRMPD1Q5SYB0 1578 aa19.23■□□□□ 0.67
PRDM5-204ENST00000502409 KDM5CP41229 1560 aa19.2■□□□□ 0.66
PRDM5-204ENST00000502409 CAMSAP2Q08AD1 1489 aa19.2■□□□□ 0.66
PRDM5-204ENST00000502409 MAGI2Q86UL8 1455 aa19.2■□□□□ 0.66
PRDM5-204ENST00000502409 SYCP2Q9BX26 1530 aa19.2■□□□□ 0.66
PRDM5-204ENST00000502409 ZNF777Q9ULD5 760 aaPredicted RBP19.19■□□□□ 0.66
PRDM5-204ENST00000502409 FGD6Q6ZV73 1430 aa19.17■□□□□ 0.66
PRDM5-204ENST00000502409 RAPGEF3O95398 923 aa19.17■□□□□ 0.66
PRDM5-204ENST00000502409 ARHGEF12Q9NZN5 1544 aa19.16■□□□□ 0.66
PRDM5-204ENST00000502409 ARHGEF5Q12774 1597 aa19.16■□□□□ 0.66
PRDM5-204ENST00000502409 RSPH4AQ5TD94 716 aa19.16■□□□□ 0.66
PRDM5-204ENST00000502409 HECW2Q9P2P5 1572 aa19.15■□□□□ 0.66
PRDM5-204ENST00000502409 PTPN23Q9H3S7 1636 aa19.15■□□□□ 0.66
PRDM5-204ENST00000502409 TCOF1Q13428 1488 aaKnown RBP19.15■□□□□ 0.66
PRDM5-204ENST00000502409 CNKSR2Q8WXI2 1034 aa19.14■□□□□ 0.65
PRDM5-204ENST00000502409 MBD5Q9P267 1494 aa19.14■□□□□ 0.65
PRDM5-204ENST00000502409 ARHGEF40Q8TER5 1519 aa19.14■□□□□ 0.65
PRDM5-204ENST00000502409 TRAPPC8Q9Y2L5 1435 aa19.13■□□□□ 0.65
PRDM5-204ENST00000502409 CCDC141Q6ZP82 1450 aa19.13■□□□□ 0.65
PRDM5-204ENST00000502409 MLH3Q9UHC1 1453 aa19.13■□□□□ 0.65
PRDM5-204ENST00000502409 ZFYVE16Q7Z3T8 1539 aa19.12■□□□□ 0.65
PRDM5-204ENST00000502409 ZNF644Q9H582 1327 aaPredicted RBP19.1■□□□□ 0.65
PRDM5-204ENST00000502409 HNRNPMP52272 730 aaKnown RBP eCLIP19.1■□□□□ 0.65
PRDM5-204ENST00000502409 AFAP1Q8N556 730 aa19.09■□□□□ 0.65
PRDM5-204ENST00000502409 RNF39Q9H2S5 420 aa19.09■□□□□ 0.65
PRDM5-204ENST00000502409 INO80Q9ULG1 1556 aaPredicted RBP19.08■□□□□ 0.65
PRDM5-204ENST00000502409 RTEL1-TNFRSF6BF6WH68 1400 aa19.08■□□□□ 0.64
PRDM5-204ENST00000502409 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.06■□□□□ 0.64
PRDM5-204ENST00000502409 SPAG9O60271 1321 aaKnown RBP19.06■□□□□ 0.64
PRDM5-204ENST00000502409 ATP7AQ04656 1500 aa19.06■□□□□ 0.64
PRDM5-204ENST00000502409 KIDINS220Q9ULH0 1771 aa19.06■□□□□ 0.64
PRDM5-204ENST00000502409 MAST1Q9Y2H9 1570 aa19.06■□□□□ 0.64
PRDM5-204ENST00000502409 SHANK2Q9UPX8 1470 aa19.05■□□□□ 0.64
PRDM5-204ENST00000502409 DNMT1P26358 1616 aaKnown RBP19.05■□□□□ 0.64
PRDM5-204ENST00000502409 RNF216Q9NWF9 866 aaPredicted RBP19.05■□□□□ 0.64
PRDM5-204ENST00000502409 REREQ9P2R6 1566 aa19.05■□□□□ 0.64
PRDM5-204ENST00000502409 CROCC2H7BZ55 1655 aa19.05■□□□□ 0.64
PRDM5-204ENST00000502409 ATP10AO60312 1499 aa19.03■□□□□ 0.64
PRDM5-204ENST00000502409 DIP2CQ9Y2E4 1556 aa19.03■□□□□ 0.64
PRDM5-204ENST00000502409 YEATS2Q9ULM3 1422 aa19.03■□□□□ 0.64
PRDM5-204ENST00000502409 TSPY4P0CV99 314 aa19.03■□□□□ 0.64
PRDM5-204ENST00000502409 TSPY10P0CW01 314 aa19.03■□□□□ 0.64
PRDM5-204ENST00000502409 PPARGC1BQ86YN6 1023 aaKnown RBP19.03■□□□□ 0.64
PRDM5-204ENST00000502409 C9orf84Q5VXU9 1444 aa19.02■□□□□ 0.64
PRDM5-204ENST00000502409 RRBP1Q9P2E9 1410 aaKnown RBP19.02■□□□□ 0.64
PRDM5-204ENST00000502409 MYT1LQ9UL68 1186 aa19.02■□□□□ 0.64
PRDM5-204ENST00000502409 ABCA6Q8N139 1617 aa19.02■□□□□ 0.64
PRDM5-204ENST00000502409 ADGBQ8N7X0 1667 aa19.01■□□□□ 0.63
PRDM5-204ENST00000502409 DAPK1P53355 1430 aa19■□□□□ 0.63
PRDM5-204ENST00000502409 FAM50AQ14320 339 aaKnown RBP18.99■□□□□ 0.63
PRDM5-204ENST00000502409 PLXNC1O60486 1568 aa18.98■□□□□ 0.63
PRDM5-204ENST00000502409 ABCC5O15440 1437 aa18.98■□□□□ 0.63
PRDM5-204ENST00000502409 AGLP35573 1532 aa18.95■□□□□ 0.62
PRDM5-204ENST00000502409 A2MP01023 1474 aa18.94■□□□□ 0.62
PRDM5-204ENST00000502409 ADGRL2O95490 1459 aa18.93■□□□□ 0.62
PRDM5-204ENST00000502409 ANKRD30AQ9BXX3 1397 aa18.91■□□□□ 0.62
PRDM5-204ENST00000502409 BCORL1Q5H9F3 1711 aa18.9■□□□□ 0.62
PRDM5-204ENST00000502409 DHX29Q7Z478 1369 aaKnown RBP18.9■□□□□ 0.62
PRDM5-204ENST00000502409 DUOX2Q9NRD8 1548 aa18.9■□□□□ 0.62
PRDM5-204ENST00000502409 ARID4BQ4LE39 1312 aaPredicted RBP18.89■□□□□ 0.61
PRDM5-204ENST00000502409 SIGLEC1Q9BZZ2 1709 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms