RNA–Protein interactions for RNA: ENST00000498660.1

TUBA4A-210, Transcript of tubulin alpha 4a, humanhuman

TSL 3

Gene TUBA4A, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-210ENST00000498660 FGD6Q6ZV73 1430 aa13.4□□□□□ -0.26
TUBA4A-210ENST00000498660 PTPN23Q9H3S7 1636 aa13.39□□□□□ -0.27
TUBA4A-210ENST00000498660 HECW2Q9P2P5 1572 aa13.38□□□□□ -0.27
TUBA4A-210ENST00000498660 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.36□□□□□ -0.27
TUBA4A-210ENST00000498660 PLEKHD1A6NEE1 506 aa13.35□□□□□ -0.27
TUBA4A-210ENST00000498660 MIA2Q96PC5 1412 aa13.35□□□□□ -0.27
TUBA4A-210ENST00000498660 CDC42BPAQ5VT25 1732 aa13.35□□□□□ -0.27
TUBA4A-210ENST00000498660 ARAP3Q8WWN8 1544 aa13.34□□□□□ -0.27
TUBA4A-210ENST00000498660 PREX2Q70Z35 1606 aa13.34□□□□□ -0.27
TUBA4A-210ENST00000498660 TCOF1Q13428 1488 aaKnown RBP13.34□□□□□ -0.27
TUBA4A-210ENST00000498660 MYO5CQ9NQX4 1742 aa13.33□□□□□ -0.28
TUBA4A-210ENST00000498660 TTC37Q6PGP7 1564 aa13.32□□□□□ -0.28
TUBA4A-210ENST00000498660 FAM50AQ14320 339 aaKnown RBP13.29□□□□□ -0.28
TUBA4A-210ENST00000498660 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.29□□□□□ -0.28
TUBA4A-210ENST00000498660 GPATCH8Q9UKJ3 1502 aaKnown RBP13.29□□□□□ -0.28
TUBA4A-210ENST00000498660 CAMSAP2Q08AD1 1489 aa13.28□□□□□ -0.28
TUBA4A-210ENST00000498660 DNMT1P26358 1616 aaKnown RBP13.28□□□□□ -0.28
TUBA4A-210ENST00000498660 ABCA9Q8IUA7 1624 aa13.28□□□□□ -0.28
TUBA4A-210ENST00000498660 CROCC2H7BZ55 1655 aa13.27□□□□□ -0.29
TUBA4A-210ENST00000498660 CDC42BPBQ9Y5S2 1711 aa13.26□□□□□ -0.29
TUBA4A-210ENST00000498660 NEO1Q92859 1461 aa13.25□□□□□ -0.29
TUBA4A-210ENST00000498660 RAPGEF3O95398 923 aa13.24□□□□□ -0.29
TUBA4A-210ENST00000498660 ADGBQ8N7X0 1667 aa13.24□□□□□ -0.29
TUBA4A-210ENST00000498660 ARHGAP5Q13017 1502 aa13.23□□□□□ -0.29
TUBA4A-210ENST00000498660 GCC2Q8IWJ2 1684 aa13.23□□□□□ -0.29
TUBA4A-210ENST00000498660 PTPRMP28827 1452 aa13.23□□□□□ -0.29
TUBA4A-210ENST00000498660 ADAMTSL3P82987 1691 aa13.22□□□□□ -0.29
TUBA4A-210ENST00000498660 ITGAEP38570 1179 aa13.22□□□□□ -0.29
TUBA4A-210ENST00000498660 CFDP1Q9UEE9 299 aaPredicted RBP13.22□□□□□ -0.29
TUBA4A-210ENST00000498660 SAMD9LQ8IVG5 1584 aa13.22□□□□□ -0.29
TUBA4A-210ENST00000498660 DAPK1P53355 1430 aa13.21□□□□□ -0.3
TUBA4A-210ENST00000498660 ARHGEF5Q12774 1597 aa13.2□□□□□ -0.3
TUBA4A-210ENST00000498660 AKNAQ7Z591 1439 aa13.2□□□□□ -0.3
TUBA4A-210ENST00000498660 CFAP74Q9C0B2 1584 aa13.2□□□□□ -0.3
TUBA4A-210ENST00000498660 PLEKHH2Q8IVE3 1493 aa13.19□□□□□ -0.3
TUBA4A-210ENST00000498660 SHANK2Q9UPX8 1470 aa13.18□□□□□ -0.3
TUBA4A-210ENST00000498660 FRMPD1Q5SYB0 1578 aa13.18□□□□□ -0.3
TUBA4A-210ENST00000498660 BCORL1Q5H9F3 1711 aa13.17□□□□□ -0.3
TUBA4A-210ENST00000498660 HFM1A2PYH4 1435 aa13.17□□□□□ -0.3
TUBA4A-210ENST00000498660 PLCH2O75038 1416 aa13.17□□□□□ -0.3
TUBA4A-210ENST00000498660 FBXO41Q8TF61 875 aa13.17□□□□□ -0.3
TUBA4A-210ENST00000498660 ARID4BQ4LE39 1312 aaPredicted RBP13.16□□□□□ -0.3
TUBA4A-210ENST00000498660 PTPRKQ15262 1439 aa13.16□□□□□ -0.3
TUBA4A-210ENST00000498660 SETD5Q9C0A6 1442 aa13.16□□□□□ -0.3
TUBA4A-210ENST00000498660 ABCC1P33527 1531 aa13.16□□□□□ -0.3
TUBA4A-210ENST00000498660 SYCP2Q9BX26 1530 aa13.16□□□□□ -0.3
TUBA4A-210ENST00000498660 ABCC5O15440 1437 aa13.15□□□□□ -0.3
TUBA4A-210ENST00000498660 DENND4BO75064 1496 aaPredicted RBP13.15□□□□□ -0.3
TUBA4A-210ENST00000498660 CCDC141Q6ZP82 1450 aa13.15□□□□□ -0.3
TUBA4A-210ENST00000498660 ZNF777Q9ULD5 760 aaPredicted RBP13.14□□□□□ -0.31
TUBA4A-210ENST00000498660 ROCK1Q13464 1354 aa13.14□□□□□ -0.31
TUBA4A-210ENST00000498660 ADGRL2O95490 1459 aa13.14□□□□□ -0.31
TUBA4A-210ENST00000498660 ZNF644Q9H582 1327 aaPredicted RBP13.13□□□□□ -0.31
TUBA4A-210ENST00000498660 MADDQ8WXG6 1647 aa13.13□□□□□ -0.31
TUBA4A-210ENST00000498660 MAST1Q9Y2H9 1570 aa13.13□□□□□ -0.31
TUBA4A-210ENST00000498660 RAB3GAP2Q9H2M9 1393 aa13.13□□□□□ -0.31
TUBA4A-210ENST00000498660 KIAA1107Q9UPP5 1409 aa13.13□□□□□ -0.31
TUBA4A-210ENST00000498660 ARHGEF40Q8TER5 1519 aa13.12□□□□□ -0.31
TUBA4A-210ENST00000498660 FANCAO15360 1455 aa13.11□□□□□ -0.31
TUBA4A-210ENST00000498660 RICTORQ6R327 1708 aa13.11□□□□□ -0.31
TUBA4A-210ENST00000498660 CCER1Q8TC90 406 aaPredicted RBP13.11□□□□□ -0.31
TUBA4A-210ENST00000498660 NAIPQ13075 1403 aa13.11□□□□□ -0.31
TUBA4A-210ENST00000498660 LMTK3Q96Q04 1460 aa13.1□□□□□ -0.31
TUBA4A-210ENST00000498660 MBD5Q9P267 1494 aa13.1□□□□□ -0.31
TUBA4A-210ENST00000498660 C9orf84Q5VXU9 1444 aa13.1□□□□□ -0.31
TUBA4A-210ENST00000498660 PLXNC1O60486 1568 aa13.09□□□□□ -0.31
TUBA4A-210ENST00000498660 HRCP23327 699 aa13.09□□□□□ -0.31
TUBA4A-210ENST00000498660 EFCAB2Q5VUJ9 269 aa13.09□□□□□ -0.31
TUBA4A-210ENST00000498660 POGZQ7Z3K3 1410 aa13.08□□□□□ -0.32
TUBA4A-210ENST00000498660 RIMS1Q86UR5 1692 aaKnown RBP13.08□□□□□ -0.32
TUBA4A-210ENST00000498660 ZMYM4Q5VZL5 1548 aa13.08□□□□□ -0.32
TUBA4A-210ENST00000498660 ANKRD30AQ9BXX3 1397 aa13.07□□□□□ -0.32
TUBA4A-210ENST00000498660 ZEB1P37275 1124 aaPredicted RBP13.07□□□□□ -0.32
TUBA4A-210ENST00000498660 RSPH4AQ5TD94 716 aa13.07□□□□□ -0.32
TUBA4A-210ENST00000498660 MAGI2Q86UL8 1455 aa13.07□□□□□ -0.32
TUBA4A-210ENST00000498660 CHIC2Q9UKJ5 165 aa13.06□□□□□ -0.32
TUBA4A-210ENST00000498660 ZFYVE16Q7Z3T8 1539 aa13.06□□□□□ -0.32
TUBA4A-210ENST00000498660 YEATS2Q9ULM3 1422 aa13.05□□□□□ -0.32
TUBA4A-210ENST00000498660 ARHGEF12Q9NZN5 1544 aa13.05□□□□□ -0.32
TUBA4A-210ENST00000498660 DHX57Q6P158 1386 aaKnown RBP13.05□□□□□ -0.32
TUBA4A-210ENST00000498660 NCOA1Q15788 1441 aa13.05□□□□□ -0.32
TUBA4A-210ENST00000498660 INO80Q9ULG1 1556 aaPredicted RBP13.04□□□□□ -0.32
TUBA4A-210ENST00000498660 SCAPERQ9BY12 1400 aa13.04□□□□□ -0.32
TUBA4A-210ENST00000498660 TSPY4P0CV99 314 aa13.03□□□□□ -0.32
TUBA4A-210ENST00000498660 TSPY10P0CW01 314 aa13.03□□□□□ -0.32
TUBA4A-210ENST00000498660 HNRNPMP52272 730 aaKnown RBP eCLIP13.03□□□□□ -0.32
TUBA4A-210ENST00000498660 HSPA2P54652 639 aa13.03□□□□□ -0.32
TUBA4A-210ENST00000498660 RRP7BPQ9NSQ0 103 aa13.03□□□□□ -0.32
TUBA4A-210ENST00000498660 ACIN1Q9UKV3 1341 aaKnown RBP13.03□□□□□ -0.32
TUBA4A-210ENST00000498660 SIGLEC1Q9BZZ2 1709 aa13.02□□□□□ -0.32
TUBA4A-210ENST00000498660 CLSPNQ9HAW4 1339 aa13.02□□□□□ -0.33
TUBA4A-210ENST00000498660 PLPPR3Q6T4P5 718 aa13.01□□□□□ -0.33
TUBA4A-210ENST00000498660 KIF15Q9NS87 1388 aa13.01□□□□□ -0.33
TUBA4A-210ENST00000498660 ZNF518AQ6AHZ1 1483 aa13.01□□□□□ -0.33
TUBA4A-210ENST00000498660 KDM5CP41229 1560 aa13□□□□□ -0.33
TUBA4A-210ENST00000498660 ATP7AQ04656 1500 aa13□□□□□ -0.33
TUBA4A-210ENST00000498660 ATP10AO60312 1499 aa13□□□□□ -0.33
TUBA4A-210ENST00000498660 TRAPPC8Q9Y2L5 1435 aa13□□□□□ -0.33
TUBA4A-210ENST00000498660 MLECQ14165 292 aa13□□□□□ -0.33
TUBA4A-210ENST00000498660 DUOX2Q9NRD8 1548 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms