RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 POGZQ7Z3K3 1410 aa10.17□□□□□ -0.78
FXN-205ENST00000498653 SETD1BQ9UPS6 1966 aaKnown RBP10.16□□□□□ -0.78
FXN-205ENST00000498653 RICTORQ6R327 1708 aa10.15□□□□□ -0.78
FXN-205ENST00000498653 CEBPAP49715 358 aaPredicted RBP10.12□□□□□ -0.79
FXN-205ENST00000498653 EHMT2Q96KQ7 1210 aa10.11□□□□□ -0.79
FXN-205ENST00000498653 PHLDB1Q86UU1 1377 aa10.11□□□□□ -0.79
FXN-205ENST00000498653 CAMSAP1Q5T5Y3 1602 aa10.11□□□□□ -0.79
FXN-205ENST00000498653 WRNQ14191 1432 aaPredicted RBP eCLIP10.1□□□□□ -0.79
FXN-205ENST00000498653 SETBP1Q9Y6X0 1596 aa10.09□□□□□ -0.79
FXN-205ENST00000498653 CARMIL2Q6F5E8 1435 aa10.09□□□□□ -0.79
FXN-205ENST00000498653 TOM1O60784 492 aa10.09□□□□□ -0.79
FXN-205ENST00000498653 NEO1Q92859 1461 aa10.09□□□□□ -0.79
FXN-205ENST00000498653 ZMYM4Q5VZL5 1548 aa10.08□□□□□ -0.8
FXN-205ENST00000498653 DISP1Q96F81 1524 aa10.08□□□□□ -0.8
FXN-205ENST00000498653 ABCA9Q8IUA7 1624 aa10.08□□□□□ -0.8
FXN-205ENST00000498653 C3P01024 1663 aa10.08□□□□□ -0.8
FXN-205ENST00000498653 AKNAQ7Z591 1439 aa10.07□□□□□ -0.8
FXN-205ENST00000498653 ZFYVE16Q7Z3T8 1539 aa10.07□□□□□ -0.8
FXN-205ENST00000498653 MLECQ14165 292 aa10.06□□□□□ -0.8
FXN-205ENST00000498653 KCNH8Q96L42 1107 aa10.05□□□□□ -0.8
FXN-205ENST00000498653 EFCAB5A4FU69 1503 aa10.04□□□□□ -0.8
FXN-205ENST00000498653 CPS1P31327 1500 aa10.04□□□□□ -0.8
FXN-205ENST00000498653 BIVM-ERCC5R4GMW8 1640 aa10.03□□□□□ -0.8
FXN-205ENST00000498653 PTPRKQ15262 1439 aa10.02□□□□□ -0.81
FXN-205ENST00000498653 FHOD3Q2V2M9 1422 aa10.01□□□□□ -0.81
FXN-205ENST00000498653 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.01□□□□□ -0.81
FXN-205ENST00000498653 FOXD4L1Q9NU39 408 aa10.01□□□□□ -0.81
FXN-205ENST00000498653 TCOF1Q13428 1488 aaKnown RBP10.01□□□□□ -0.81
FXN-205ENST00000498653 NCKAP5LQ9HCH0 1330 aa10.01□□□□□ -0.81
FXN-205ENST00000498653 IQGAP2Q13576 1575 aa10.01□□□□□ -0.81
FXN-205ENST00000498653 LRRC7Q96NW7 1537 aa9.99□□□□□ -0.81
FXN-205ENST00000498653 DENND4BO75064 1496 aaPredicted RBP9.98□□□□□ -0.81
FXN-205ENST00000498653 PLA2R1Q13018 1463 aa9.98□□□□□ -0.81
FXN-205ENST00000498653 LRP5O75197 1615 aa9.98□□□□□ -0.81
FXN-205ENST00000498653 ZNF142P52746 1687 aaPredicted RBP9.98□□□□□ -0.81
FXN-205ENST00000498653 RNF17Q9BXT8 1623 aaKnown RBP9.96□□□□□ -0.81
FXN-205ENST00000498653 RBM33Q96EV2 1170 aaKnown RBP9.96□□□□□ -0.82
FXN-205ENST00000498653 TRAPPC8Q9Y2L5 1435 aa9.96□□□□□ -0.82
FXN-205ENST00000498653 SLC4A2P04920 1241 aa9.95□□□□□ -0.82
FXN-205ENST00000498653 ABCA8O94911 1581 aa9.95□□□□□ -0.82
FXN-205ENST00000498653 HECW1Q76N89 1606 aa9.95□□□□□ -0.82
FXN-205ENST00000498653 SUPT6HQ7KZ85 1726 aaKnown RBP9.94□□□□□ -0.82
FXN-205ENST00000498653 MAGI2Q86UL8 1455 aa9.94□□□□□ -0.82
FXN-205ENST00000498653 SHANK2Q9UPX8 1470 aa9.94□□□□□ -0.82
FXN-205ENST00000498653 RAPGEF2Q9Y4G8 1499 aa9.94□□□□□ -0.82
FXN-205ENST00000498653 CSRNP3Q8WYN3 585 aa9.93□□□□□ -0.82
FXN-205ENST00000498653 RAPGEF6Q8TEU7 1601 aa9.93□□□□□ -0.82
FXN-205ENST00000498653 VWDEQ8N2E2 1590 aa9.92□□□□□ -0.82
FXN-205ENST00000498653 C9orf84Q5VXU9 1444 aa9.91□□□□□ -0.82
FXN-205ENST00000498653 MYO3AQ8NEV4 1616 aa9.91□□□□□ -0.82
FXN-205ENST00000498653 NEURL4Q96JN8 1562 aa9.9□□□□□ -0.82
FXN-205ENST00000498653 ZBTB22O15209 634 aa9.9□□□□□ -0.82
FXN-205ENST00000498653 TRIM52Q96A61 297 aa9.9□□□□□ -0.82
FXN-205ENST00000498653 UGGT2Q9NYU1 1516 aa9.9□□□□□ -0.82
FXN-205ENST00000498653 PKD2Q13563 968 aa9.89□□□□□ -0.83
FXN-205ENST00000498653 CDK12Q9NYV4 1490 aaPredicted RBP9.89□□□□□ -0.83
FXN-205ENST00000498653 POLR1AO95602 1720 aaPredicted RBP9.88□□□□□ -0.83
FXN-205ENST00000498653 ATP10AO60312 1499 aa9.88□□□□□ -0.83
FXN-205ENST00000498653 STRCP1A6NGW2 1772 aa9.88□□□□□ -0.83
FXN-205ENST00000498653 CFAP74Q9C0B2 1584 aa9.88□□□□□ -0.83
FXN-205ENST00000498653 ZRANB1Q9UGI0 708 aa9.87□□□□□ -0.83
FXN-205ENST00000498653 CEP170BQ9Y4F5 1589 aaPredicted RBP9.87□□□□□ -0.83
FXN-205ENST00000498653 MYCNP04198 464 aaPredicted RBP9.86□□□□□ -0.83
FXN-205ENST00000498653 CEP350Q5VT06 3117 aa9.85□□□□□ -0.83
FXN-205ENST00000498653 SYNMO15061 1565 aa9.85□□□□□ -0.83
FXN-205ENST00000498653 EP400Q96L91 3159 aa9.85□□□□□ -0.83
FXN-205ENST00000498653 NPATQ14207 1427 aa9.84□□□□□ -0.83
FXN-205ENST00000498653 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.82□□□□□ -0.84
FXN-205ENST00000498653 SLC34A2O95436 690 aa9.82□□□□□ -0.84
FXN-205ENST00000498653 HNRNPUL2Q1KMD3 747 aaKnown RBP9.82□□□□□ -0.84
FXN-205ENST00000498653 MROH2AA6NES4 1674 aa9.82□□□□□ -0.84
FXN-205ENST00000498653 LRP6O75581 1613 aa9.82□□□□□ -0.84
FXN-205ENST00000498653 IGF1RP08069 1367 aa9.81□□□□□ -0.84
FXN-205ENST00000498653 YY1P25490 414 aa9.81□□□□□ -0.84
FXN-205ENST00000498653 REREQ9P2R6 1566 aa9.8□□□□□ -0.84
FXN-205ENST00000498653 SENP3-EIF4A1A0A087X0R7 540 aa9.8□□□□□ -0.84
FXN-205ENST00000498653 AGLP35573 1532 aa9.8□□□□□ -0.84
FXN-205ENST00000498653 RGS12O14924 1447 aa9.8□□□□□ -0.84
FXN-205ENST00000498653 NHSL1Q5SYE7 1610 aa9.79□□□□□ -0.84
FXN-205ENST00000498653 XIRP1Q702N8 1843 aaKnown RBP9.79□□□□□ -0.84
FXN-205ENST00000498653 ATP10BO94823 1461 aa9.79□□□□□ -0.84
FXN-205ENST00000498653 U3KPZ7 1027 aaPredicted RBP9.78□□□□□ -0.84
FXN-205ENST00000498653 CDK13Q14004 1512 aaKnown RBP9.77□□□□□ -0.84
FXN-205ENST00000498653 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.77□□□□□ -0.84
FXN-205ENST00000498653 DIP2CQ9Y2E4 1556 aa9.77□□□□□ -0.85
FXN-205ENST00000498653 ROBO1Q9Y6N7 1651 aa9.77□□□□□ -0.85
FXN-205ENST00000498653 FAM135BQ49AJ0 1406 aa9.76□□□□□ -0.85
FXN-205ENST00000498653 DNMT1P26358 1616 aaKnown RBP9.76□□□□□ -0.85
FXN-205ENST00000498653 SAMD1Q6SPF0 538 aaPredicted RBP9.75□□□□□ -0.85
FXN-205ENST00000498653 CNTLNQ9NXG0 1405 aa9.74□□□□□ -0.85
FXN-205ENST00000498653 RXRBP28702 533 aa9.74□□□□□ -0.85
FXN-205ENST00000498653 APLP2Q06481 763 aa9.74□□□□□ -0.85
FXN-205ENST00000498653 ZNF772Q68DY9 489 aaPredicted RBP9.74□□□□□ -0.85
FXN-205ENST00000498653 RNF39Q9H2S5 420 aa9.74□□□□□ -0.85
FXN-205ENST00000498653 ABCA6Q8N139 1617 aa9.73□□□□□ -0.85
FXN-205ENST00000498653 KDM5CP41229 1560 aa9.72□□□□□ -0.85
FXN-205ENST00000498653 PHLPP1O60346 1717 aa9.7□□□□□ -0.86
FXN-205ENST00000498653 ARID3CA6NKF2 412 aa9.7□□□□□ -0.86
FXN-205ENST00000498653 A2ML1A8K2U0 1454 aa9.69□□□□□ -0.86
FXN-205ENST00000498653 ATXN8OSP0DMR3 200 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms