RNA–Protein interactions for RNA: ENST00000498595.5

HDLBP-247, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-247ENST00000498595 MYO5CQ9NQX4 1742 aa23.46■■□□□ 1.35
HDLBP-247ENST00000498595 ADAMTSL3P82987 1691 aa23.44■■□□□ 1.34
HDLBP-247ENST00000498595 PTPRMP28827 1452 aa23.44■■□□□ 1.34
HDLBP-247ENST00000498595 PCF11O94913 1555 aaKnown RBP23.44■■□□□ 1.34
HDLBP-247ENST00000498595 ARHGAP5Q13017 1502 aa23.43■■□□□ 1.34
HDLBP-247ENST00000498595 BCORL1Q5H9F3 1711 aa23.43■■□□□ 1.34
HDLBP-247ENST00000498595 FYCO1Q9BQS8 1478 aa23.41■■□□□ 1.34
HDLBP-247ENST00000498595 YEATS2Q9ULM3 1422 aa23.4■■□□□ 1.34
HDLBP-247ENST00000498595 MYT1LQ9UL68 1186 aa23.38■■□□□ 1.33
HDLBP-247ENST00000498595 MADDQ8WXG6 1647 aa23.37■■□□□ 1.33
HDLBP-247ENST00000498595 ZNF518AQ6AHZ1 1483 aa23.37■■□□□ 1.33
HDLBP-247ENST00000498595 LRRIQ1Q96JM4 1722 aa23.37■■□□□ 1.33
HDLBP-247ENST00000498595 ATP10AO60312 1499 aa23.33■■□□□ 1.33
HDLBP-247ENST00000498595 MLECQ14165 292 aa23.33■■□□□ 1.33
HDLBP-247ENST00000498595 C9orf84Q5VXU9 1444 aa23.32■■□□□ 1.32
HDLBP-247ENST00000498595 AFAP1Q8N556 730 aa23.31■■□□□ 1.32
HDLBP-247ENST00000498595 RIMS1Q86UR5 1692 aaKnown RBP23.29■■□□□ 1.32
HDLBP-247ENST00000498595 PLPPR3Q6T4P5 718 aa23.29■■□□□ 1.32
HDLBP-247ENST00000498595 PREX2Q70Z35 1606 aa23.29■■□□□ 1.32
HDLBP-247ENST00000498595 KDM5CP41229 1560 aa23.26■■□□□ 1.31
HDLBP-247ENST00000498595 CDC42BPBQ9Y5S2 1711 aa23.25■■□□□ 1.31
HDLBP-247ENST00000498595 ZNF777Q9ULD5 760 aaPredicted RBP23.24■■□□□ 1.31
HDLBP-247ENST00000498595 MTUS2Q5JR59 1369 aa23.23■■□□□ 1.31
HDLBP-247ENST00000498595 ABCC1P33527 1531 aa23.23■■□□□ 1.31
HDLBP-247ENST00000498595 MLH3Q9UHC1 1453 aa23.21■■□□□ 1.31
HDLBP-247ENST00000498595 SIGLEC1Q9BZZ2 1709 aa23.21■■□□□ 1.31
HDLBP-247ENST00000498595 CEP162Q5TB80 1403 aa23.19■■□□□ 1.3
HDLBP-247ENST00000498595 TRAPPC8Q9Y2L5 1435 aa23.19■■□□□ 1.3
HDLBP-247ENST00000498595 FER1L4A9Z1Z3 1794 aa23.19■■□□□ 1.3
HDLBP-247ENST00000498595 CCNB3Q8WWL7 1395 aa23.18■■□□□ 1.3
HDLBP-247ENST00000498595 ILDR1Q86SU0 546 aaPredicted RBP23.18■■□□□ 1.3
HDLBP-247ENST00000498595 CDC42BPAQ5VT25 1732 aa23.18■■□□□ 1.3
HDLBP-247ENST00000498595 ARHGEF12Q9NZN5 1544 aa23.18■■□□□ 1.3
HDLBP-247ENST00000498595 LMTK3Q96Q04 1460 aa23.17■■□□□ 1.3
HDLBP-247ENST00000498595 CFDP1Q9UEE9 299 aaPredicted RBP23.17■■□□□ 1.3
HDLBP-247ENST00000498595 ITSN2Q9NZM3 1697 aa23.16■■□□□ 1.3
HDLBP-247ENST00000498595 DIP2CQ9Y2E4 1556 aa23.16■■□□□ 1.3
HDLBP-247ENST00000498595 ESF1Q9H501 851 aaKnown RBP23.16■■□□□ 1.3
HDLBP-247ENST00000498595 GPATCH8Q9UKJ3 1502 aaKnown RBP23.16■■□□□ 1.3
HDLBP-247ENST00000498595 REREQ9P2R6 1566 aa23.14■■□□□ 1.3
HDLBP-247ENST00000498595 PLEKHH2Q8IVE3 1493 aa23.13■■□□□ 1.29
HDLBP-247ENST00000498595 ABCA6Q8N139 1617 aa23.12■■□□□ 1.29
HDLBP-247ENST00000498595 SPAG9O60271 1321 aaKnown RBP23.11■■□□□ 1.29
HDLBP-247ENST00000498595 SAMD9LQ8IVG5 1584 aa23.1■■□□□ 1.29
HDLBP-247ENST00000498595 SYCP2Q9BX26 1530 aa23.1■■□□□ 1.29
HDLBP-247ENST00000498595 HNRNPMP52272 730 aaKnown RBP eCLIP23.1■■□□□ 1.29
HDLBP-247ENST00000498595 KIAA1107Q9UPP5 1409 aa23.09■■□□□ 1.29
HDLBP-247ENST00000498595 EHBP1L1Q8N3D4 1523 aa23.09■■□□□ 1.29
HDLBP-247ENST00000498595 HSPA2P54652 639 aa23.09■■□□□ 1.29
HDLBP-247ENST00000498595 AGLP35573 1532 aa23.08■■□□□ 1.29
HDLBP-247ENST00000498595 CEBPAP49715 358 aaPredicted RBP23.06■■□□□ 1.28
HDLBP-247ENST00000498595 KIDINS220Q9ULH0 1771 aa23.04■■□□□ 1.28
HDLBP-247ENST00000498595 CNTLNQ9NXG0 1405 aa23■■□□□ 1.27
HDLBP-247ENST00000498595 ATP7AQ04656 1500 aa23■■□□□ 1.27
HDLBP-247ENST00000498595 TIAM1Q13009 1591 aa23■■□□□ 1.27
HDLBP-247ENST00000498595 UHRF1BP1Q6BDS2 1440 aa22.99■■□□□ 1.27
HDLBP-247ENST00000498595 LOC105371045A0A1W2PR82 267 aa22.99■■□□□ 1.27
HDLBP-247ENST00000498595 PREX1Q8TCU6 1659 aa22.99■■□□□ 1.27
HDLBP-247ENST00000498595 ZNF644Q9H582 1327 aaPredicted RBP22.96■■□□□ 1.27
HDLBP-247ENST00000498595 A2MP01023 1474 aa22.95■■□□□ 1.26
HDLBP-247ENST00000498595 VPS8Q8N3P4 1428 aa22.95■■□□□ 1.26
HDLBP-247ENST00000498595 FBXO41Q8TF61 875 aa22.95■■□□□ 1.26
HDLBP-247ENST00000498595 INO80Q9ULG1 1556 aaPredicted RBP22.95■■□□□ 1.26
HDLBP-247ENST00000498595 SUPT6HQ7KZ85 1726 aaKnown RBP22.94■■□□□ 1.26
HDLBP-247ENST00000498595 NCOA2Q15596 1464 aa22.93■■□□□ 1.26
HDLBP-247ENST00000498595 DMRT2Q9Y5R5 561 aa22.92■■□□□ 1.26
HDLBP-247ENST00000498595 C3P01024 1663 aa22.91■■□□□ 1.26
HDLBP-247ENST00000498595 RSPH4AQ5TD94 716 aa22.9■■□□□ 1.26
HDLBP-247ENST00000498595 MBD5Q9P267 1494 aa22.9■■□□□ 1.26
HDLBP-247ENST00000498595 GGT6Q6P531 493 aa22.89■■□□□ 1.25
HDLBP-247ENST00000498595 RTEL1-TNFRSF6BF6WH68 1400 aa22.89■■□□□ 1.25
HDLBP-247ENST00000498595 PLXNC1O60486 1568 aa22.89■■□□□ 1.25
HDLBP-247ENST00000498595 ZMYM3Q14202 1370 aa22.87■■□□□ 1.25
HDLBP-247ENST00000498595 CAMSAP2Q08AD1 1489 aa22.86■■□□□ 1.25
HDLBP-247ENST00000498595 CCDC141Q6ZP82 1450 aa22.86■■□□□ 1.25
HDLBP-247ENST00000498595 PPP6R1Q9UPN7 881 aa22.86■■□□□ 1.25
HDLBP-247ENST00000498595 SETD1BQ9UPS6 1966 aaKnown RBP22.86■■□□□ 1.25
HDLBP-247ENST00000498595 ADGBQ8N7X0 1667 aa22.86■■□□□ 1.25
HDLBP-247ENST00000498595 LRRC9Q6ZRR7 1453 aa22.85■■□□□ 1.25
HDLBP-247ENST00000498595 NPATQ14207 1427 aa22.85■■□□□ 1.25
HDLBP-247ENST00000498595 MROH2AA6NES4 1674 aa22.85■■□□□ 1.25
HDLBP-247ENST00000498595 TSPY4P0CV99 314 aa22.83■■□□□ 1.25
HDLBP-247ENST00000498595 TSPY10P0CW01 314 aa22.83■■□□□ 1.25
HDLBP-247ENST00000498595 APLP2Q06481 763 aa22.82■■□□□ 1.24
HDLBP-247ENST00000498595 DHX29Q7Z478 1369 aaKnown RBP22.81■■□□□ 1.24
HDLBP-247ENST00000498595 MAP3K1Q13233 1512 aa22.81■■□□□ 1.24
HDLBP-247ENST00000498595 CLTCQ00610 1675 aaKnown RBP22.79■■□□□ 1.24
HDLBP-247ENST00000498595 CERKQ8TCT0 537 aa22.79■■□□□ 1.24
HDLBP-247ENST00000498595 KIF3BO15066 747 aa22.77■■□□□ 1.24
HDLBP-247ENST00000498595 ARHGEF5Q12774 1597 aa22.76■■□□□ 1.23
HDLBP-247ENST00000498595 KANK4Q5T7N3 995 aaPredicted RBP22.75■■□□□ 1.23
HDLBP-247ENST00000498595 PTPRTO14522 1441 aa22.74■■□□□ 1.23
HDLBP-247ENST00000498595 STRCQ7RTU9 1775 aa22.73■■□□□ 1.23
HDLBP-247ENST00000498595 PTPRKQ15262 1439 aa22.73■■□□□ 1.23
HDLBP-247ENST00000498595 MYOM3Q5VTT5 1437 aa22.72■■□□□ 1.23
HDLBP-247ENST00000498595 MIA2Q96PC5 1412 aa22.72■■□□□ 1.23
HDLBP-247ENST00000498595 NCOA1Q15788 1441 aa22.71■■□□□ 1.23
HDLBP-247ENST00000498595 WASHC2CQ9Y4E1 1318 aa22.7■■□□□ 1.22
HDLBP-247ENST00000498595 CAMSAP1Q5T5Y3 1602 aa22.68■■□□□ 1.22
HDLBP-247ENST00000498595 FAM135AQ9P2D6 1515 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms