RNA–Protein interactions for RNA: ENST00000498447.5

SMIM19-206, Transcript of small integral membrane protein 19, humanhuman

TSL 3

Gene SMIM19, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-206ENST00000498447 MYO5CQ9NQX4 1742 aa28.97■■■□□ 2.23
SMIM19-206ENST00000498447 SIGLEC1Q9BZZ2 1709 aa28.97■■■□□ 2.23
SMIM19-206ENST00000498447 CDK11AQ9UQ88 783 aaPredicted RBP28.96■■■□□ 2.23
SMIM19-206ENST00000498447 KIF14Q15058 1648 aa28.95■■■□□ 2.23
SMIM19-206ENST00000498447 PCF11O94913 1555 aaKnown RBP28.95■■■□□ 2.22
SMIM19-206ENST00000498447 TROQ12816 1431 aaPredicted RBP28.92■■■□□ 2.22
SMIM19-206ENST00000498447 LMTK3Q96Q04 1460 aa28.91■■■□□ 2.22
SMIM19-206ENST00000498447 EFCAB2Q5VUJ9 269 aa28.91■■■□□ 2.22
SMIM19-206ENST00000498447 LRRIQ1Q96JM4 1722 aa28.91■■■□□ 2.22
SMIM19-206ENST00000498447 CLIP1P30622 1438 aa28.87■■■□□ 2.21
SMIM19-206ENST00000498447 ARHGAP5Q13017 1502 aa28.84■■■□□ 2.21
SMIM19-206ENST00000498447 MLECQ14165 292 aa28.83■■■□□ 2.21
SMIM19-206ENST00000498447 ATP10AO60312 1499 aa28.83■■■□□ 2.21
SMIM19-206ENST00000498447 FER1L4A9Z1Z3 1794 aa28.82■■■□□ 2.2
SMIM19-206ENST00000498447 ZNF518AQ6AHZ1 1483 aa28.81■■■□□ 2.2
SMIM19-206ENST00000498447 C9orf84Q5VXU9 1444 aa28.81■■■□□ 2.2
SMIM19-206ENST00000498447 PLPPR3Q6T4P5 718 aa28.8■■■□□ 2.2
SMIM19-206ENST00000498447 CASKIN1Q8WXD9 1431 aa28.78■■■□□ 2.2
SMIM19-206ENST00000498447 KDM5CP41229 1560 aa28.78■■■□□ 2.2
SMIM19-206ENST00000498447 ARHGEF12Q9NZN5 1544 aa28.77■■■□□ 2.2
SMIM19-206ENST00000498447 CCDC18Q5T9S5 1454 aa28.77■■■□□ 2.2
SMIM19-206ENST00000498447 CDC42BPBQ9Y5S2 1711 aa28.75■■■□□ 2.19
SMIM19-206ENST00000498447 AFAP1Q8N556 730 aa28.74■■■□□ 2.19
SMIM19-206ENST00000498447 PREX2Q70Z35 1606 aa28.72■■■□□ 2.19
SMIM19-206ENST00000498447 HSPA2P54652 639 aa28.72■■■□□ 2.19
SMIM19-206ENST00000498447 FBXO41Q8TF61 875 aa28.72■■■□□ 2.19
SMIM19-206ENST00000498447 DIP2CQ9Y2E4 1556 aa28.69■■■□□ 2.18
SMIM19-206ENST00000498447 ABCC1P33527 1531 aa28.68■■■□□ 2.18
SMIM19-206ENST00000498447 FYCO1Q9BQS8 1478 aa28.67■■■□□ 2.18
SMIM19-206ENST00000498447 MYT1LQ9UL68 1186 aa28.66■■■□□ 2.18
SMIM19-206ENST00000498447 MLH3Q9UHC1 1453 aa28.65■■■□□ 2.18
SMIM19-206ENST00000498447 ABCA6Q8N139 1617 aa28.65■■■□□ 2.18
SMIM19-206ENST00000498447 REREQ9P2R6 1566 aa28.64■■■□□ 2.18
SMIM19-206ENST00000498447 ITSN2Q9NZM3 1697 aa28.64■■■□□ 2.17
SMIM19-206ENST00000498447 TRAPPC8Q9Y2L5 1435 aa28.63■■■□□ 2.17
SMIM19-206ENST00000498447 CDC42BPAQ5VT25 1732 aa28.62■■■□□ 2.17
SMIM19-206ENST00000498447 PREX1Q8TCU6 1659 aa28.61■■■□□ 2.17
SMIM19-206ENST00000498447 CEBPAP49715 358 aaPredicted RBP28.59■■■□□ 2.17
SMIM19-206ENST00000498447 AGLP35573 1532 aa28.54■■■□□ 2.16
SMIM19-206ENST00000498447 KIDINS220Q9ULH0 1771 aa28.54■■■□□ 2.16
SMIM19-206ENST00000498447 SAMD9LQ8IVG5 1584 aa28.51■■■□□ 2.15
SMIM19-206ENST00000498447 GPATCH8Q9UKJ3 1502 aaKnown RBP28.49■■■□□ 2.15
SMIM19-206ENST00000498447 ZNF777Q9ULD5 760 aaPredicted RBP28.48■■■□□ 2.15
SMIM19-206ENST00000498447 SYCP2Q9BX26 1530 aa28.48■■■□□ 2.15
SMIM19-206ENST00000498447 UHRF1BP1Q6BDS2 1440 aa28.47■■■□□ 2.15
SMIM19-206ENST00000498447 C3P01024 1663 aa28.47■■■□□ 2.15
SMIM19-206ENST00000498447 SETD1BQ9UPS6 1966 aaKnown RBP28.46■■■□□ 2.15
SMIM19-206ENST00000498447 ESF1Q9H501 851 aaKnown RBP28.43■■■□□ 2.14
SMIM19-206ENST00000498447 STRCQ7RTU9 1775 aa28.4■■■□□ 2.14
SMIM19-206ENST00000498447 HNRNPMP52272 730 aaKnown RBP eCLIP28.4■■■□□ 2.14
SMIM19-206ENST00000498447 CERKQ8TCT0 537 aa28.4■■■□□ 2.14
SMIM19-206ENST00000498447 SPAG9O60271 1321 aaKnown RBP28.4■■■□□ 2.14
SMIM19-206ENST00000498447 CCNB3Q8WWL7 1395 aa28.39■■■□□ 2.14
SMIM19-206ENST00000498447 CNTLNQ9NXG0 1405 aa28.39■■■□□ 2.14
SMIM19-206ENST00000498447 PLEKHH2Q8IVE3 1493 aa28.39■■■□□ 2.13
SMIM19-206ENST00000498447 MTUS2Q5JR59 1369 aa28.38■■■□□ 2.13
SMIM19-206ENST00000498447 KIAA1107Q9UPP5 1409 aa28.38■■■□□ 2.13
SMIM19-206ENST00000498447 CFDP1Q9UEE9 299 aaPredicted RBP28.38■■■□□ 2.13
SMIM19-206ENST00000498447 ATP7AQ04656 1500 aa28.37■■■□□ 2.13
SMIM19-206ENST00000498447 INO80Q9ULG1 1556 aaPredicted RBP28.35■■■□□ 2.13
SMIM19-206ENST00000498447 DMRT2Q9Y5R5 561 aa28.34■■■□□ 2.13
SMIM19-206ENST00000498447 SUPT6HQ7KZ85 1726 aaKnown RBP28.33■■■□□ 2.13
SMIM19-206ENST00000498447 MROH2AA6NES4 1674 aa28.32■■■□□ 2.12
SMIM19-206ENST00000498447 PLXNC1O60486 1568 aa28.31■■■□□ 2.12
SMIM19-206ENST00000498447 TIAM1Q13009 1591 aa28.3■■■□□ 2.12
SMIM19-206ENST00000498447 EHBP1L1Q8N3D4 1523 aa28.3■■■□□ 2.12
SMIM19-206ENST00000498447 A2MP01023 1474 aa28.28■■■□□ 2.12
SMIM19-206ENST00000498447 CEP162Q5TB80 1403 aa28.26■■■□□ 2.12
SMIM19-206ENST00000498447 NPATQ14207 1427 aa28.26■■■□□ 2.11
SMIM19-206ENST00000498447 PTPRTO14522 1441 aa28.25■■■□□ 2.11
SMIM19-206ENST00000498447 ZMYM3Q14202 1370 aa28.24■■■□□ 2.11
SMIM19-206ENST00000498447 ZNF644Q9H582 1327 aaPredicted RBP28.23■■■□□ 2.11
SMIM19-206ENST00000498447 CLTCQ00610 1675 aaKnown RBP28.23■■■□□ 2.11
SMIM19-206ENST00000498447 NCOA1Q15788 1441 aa28.21■■■□□ 2.11
SMIM19-206ENST00000498447 ADGBQ8N7X0 1667 aa28.21■■■□□ 2.11
SMIM19-206ENST00000498447 MBD5Q9P267 1494 aa28.21■■■□□ 2.11
SMIM19-206ENST00000498447 GGT6Q6P531 493 aa28.16■■■□□ 2.1
SMIM19-206ENST00000498447 CAMSAP1Q5T5Y3 1602 aa28.16■■■□□ 2.1
SMIM19-206ENST00000498447 RTEL1-TNFRSF6BF6WH68 1400 aa28.14■■■□□ 2.1
SMIM19-206ENST00000498447 MYO3AQ8NEV4 1616 aa28.13■■■□□ 2.09
SMIM19-206ENST00000498447 PTPRKQ15262 1439 aa28.12■■■□□ 2.09
SMIM19-206ENST00000498447 NCOA2Q15596 1464 aa28.12■■■□□ 2.09
SMIM19-206ENST00000498447 ZNF142P52746 1687 aaPredicted RBP28.11■■■□□ 2.09
SMIM19-206ENST00000498447 LTBP4Q8N2S1 1624 aa28.1■■■□□ 2.09
SMIM19-206ENST00000498447 PPP6R1Q9UPN7 881 aa28.1■■■□□ 2.09
SMIM19-206ENST00000498447 CAMSAP2Q08AD1 1489 aa28.08■■■□□ 2.09
SMIM19-206ENST00000498447 CCDC141Q6ZP82 1450 aa28.08■■■□□ 2.09
SMIM19-206ENST00000498447 DHX29Q7Z478 1369 aaKnown RBP28.08■■■□□ 2.09
SMIM19-206ENST00000498447 CEP170BQ9Y4F5 1589 aaPredicted RBP28.07■■■□□ 2.08
SMIM19-206ENST00000498447 PLA2R1Q13018 1463 aa28.03■■■□□ 2.08
SMIM19-206ENST00000498447 NCKAP5LQ9HCH0 1330 aa28.03■■■□□ 2.08
SMIM19-206ENST00000498447 IQSEC2Q5JU85 1478 aa28.01■■■□□ 2.07
SMIM19-206ENST00000498447 RSPH4AQ5TD94 716 aa27.99■■■□□ 2.07
SMIM19-206ENST00000498447 TCOF1Q13428 1488 aaKnown RBP27.99■■■□□ 2.07
SMIM19-206ENST00000498447 KIF3BO15066 747 aa27.98■■■□□ 2.07
SMIM19-206ENST00000498447 PKD2Q13563 968 aa27.98■■■□□ 2.07
SMIM19-206ENST00000498447 VPS8Q8N3P4 1428 aa27.98■■■□□ 2.07
SMIM19-206ENST00000498447 ARHGEF5Q12774 1597 aa27.98■■■□□ 2.07
SMIM19-206ENST00000498447 KDM5DQ9BY66 1539 aa27.96■■■□□ 2.07
SMIM19-206ENST00000498447 FAM135AQ9P2D6 1515 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms