RNA–Protein interactions for RNA: ENST00000497964.1

MACF1-226, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 4,160 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-226ENST00000497964 WDR97A6NE52 1622 aa9.36□□□□□ -0.91
MACF1-226ENST00000497964 SLKQ9H2G2 1235 aaPredicted RBP9.35□□□□□ -0.91
MACF1-226ENST00000497964 ST20-MTHFSA0A0A6YYL1 179 aa9.34□□□□□ -0.91
MACF1-226ENST00000497964 KIF7Q2M1P5 1343 aa9.33□□□□□ -0.92
MACF1-226ENST00000497964 NAP1L5Q96NT1 182 aaPredicted RBP9.33□□□□□ -0.92
MACF1-226ENST00000497964 LRRC9Q6ZRR7 1453 aa9.33□□□□□ -0.92
MACF1-226ENST00000497964 RALBP1Q15311 655 aa9.32□□□□□ -0.92
MACF1-226ENST00000497964 KTN1Q86UP2 1357 aaKnown RBP9.32□□□□□ -0.92
MACF1-226ENST00000497964 RRP1P56182 461 aaKnown RBP9.32□□□□□ -0.92
MACF1-226ENST00000497964 TRIM44Q96DX7 344 aaPredicted RBP9.32□□□□□ -0.92
MACF1-226ENST00000497964 CCDC7Q96M83 1385 aa9.32□□□□□ -0.92
MACF1-226ENST00000497964 TMF1P82094 1093 aa9.31□□□□□ -0.92
MACF1-226ENST00000497964 NLRP13Q86W25 1043 aa9.31□□□□□ -0.92
MACF1-226ENST00000497964 NUP155O75694 1391 aa9.31□□□□□ -0.92
MACF1-226ENST00000497964 GZF1Q9H116 711 aaPredicted RBP9.3□□□□□ -0.92
MACF1-226ENST00000497964 ROCK2O75116 1388 aaKnown RBP9.3□□□□□ -0.92
MACF1-226ENST00000497964 FTSJ3Q8IY81 847 aaKnown RBP9.3□□□□□ -0.92
MACF1-226ENST00000497964 FGD6Q6ZV73 1430 aa9.3□□□□□ -0.92
MACF1-226ENST00000497964 UACAQ9BZF9 1416 aa9.3□□□□□ -0.92
MACF1-226ENST00000497964 AKNAQ7Z591 1439 aa9.29□□□□□ -0.92
MACF1-226ENST00000497964 IL27Q8NEV9 243 aa9.29□□□□□ -0.92
MACF1-226ENST00000497964 CRBNQ96SW2 442 aa9.29□□□□□ -0.92
MACF1-226ENST00000497964 PRXQ9BXM0 1461 aa9.29□□□□□ -0.92
MACF1-226ENST00000497964 CDCA8Q53HL2 280 aa9.29□□□□□ -0.92
MACF1-226ENST00000497964 USP47Q96K76 1375 aa9.28□□□□□ -0.92
MACF1-226ENST00000497964 CCDC146Q8IYE0 955 aa9.28□□□□□ -0.92
MACF1-226ENST00000497964 ANO8Q9HCE9 1232 aaPredicted RBP9.28□□□□□ -0.92
MACF1-226ENST00000497964 ARID4BQ4LE39 1312 aaPredicted RBP9.28□□□□□ -0.92
MACF1-226ENST00000497964 CNTLNQ9NXG0 1405 aa9.28□□□□□ -0.92
MACF1-226ENST00000497964 CADPSQ9ULU8 1353 aa9.28□□□□□ -0.92
MACF1-226ENST00000497964 NCLP19338 710 aaKnown RBP9.27□□□□□ -0.92
MACF1-226ENST00000497964 ZNF644Q9H582 1327 aaPredicted RBP9.27□□□□□ -0.92
MACF1-226ENST00000497964 MYBBP1AQ9BQG0 1328 aaKnown RBP9.27□□□□□ -0.93
MACF1-226ENST00000497964 GSE1Q14687 1217 aa9.27□□□□□ -0.93
MACF1-226ENST00000497964 NBPF8Q3BBV2 869 aa9.27□□□□□ -0.93
MACF1-226ENST00000497964 USP35Q9P2H5 1018 aa9.27□□□□□ -0.93
MACF1-226ENST00000497964 PDE3BQ13370 1112 aa9.26□□□□□ -0.93
MACF1-226ENST00000497964 C11orf95C9JLR9 678 aaPredicted RBP9.26□□□□□ -0.93
MACF1-226ENST00000497964 CDCA7LQ96GN5 454 aa9.26□□□□□ -0.93
MACF1-226ENST00000497964 GOLGA2Q08379 1002 aa9.25□□□□□ -0.93
MACF1-226ENST00000497964 CLUAP1Q96AJ1 413 aa9.25□□□□□ -0.93
MACF1-226ENST00000497964 KIF15Q9NS87 1388 aa9.25□□□□□ -0.93
MACF1-226ENST00000497964 PANK3Q9H999 370 aa9.25□□□□□ -0.93
MACF1-226ENST00000497964 HNRNPMP52272 730 aaKnown RBP eCLIP9.24□□□□□ -0.93
MACF1-226ENST00000497964 ERICH3Q5RHP9 1530 aa9.24□□□□□ -0.93
MACF1-226ENST00000497964 CFAP53Q96M91 514 aa9.23□□□□□ -0.93
MACF1-226ENST00000497964 U2SURPO15042 1029 aaKnown RBP9.23□□□□□ -0.93
MACF1-226ENST00000497964 TPRNQ4KMQ1 711 aa9.23□□□□□ -0.93
MACF1-226ENST00000497964 FGD5Q6ZNL6 1462 aa9.22□□□□□ -0.93
MACF1-226ENST00000497964 GOLGA6L22H0YM25 854 aa9.22□□□□□ -0.93
MACF1-226ENST00000497964 STAG3Q9UJ98 1225 aa9.22□□□□□ -0.93
MACF1-226ENST00000497964 MYOM3Q5VTT5 1437 aa9.22□□□□□ -0.93
MACF1-226ENST00000497964 ANKRD30AQ9BXX3 1397 aa9.22□□□□□ -0.93
MACF1-226ENST00000497964 NFKBIBQ15653 356 aa9.22□□□□□ -0.93
MACF1-226ENST00000497964 FAM161AQ3B820 660 aa9.22□□□□□ -0.93
MACF1-226ENST00000497964 BRPF3Q9ULD4 1205 aa9.22□□□□□ -0.93
MACF1-226ENST00000497964 RAD54L2Q9Y4B4 1467 aa9.22□□□□□ -0.93
MACF1-226ENST00000497964 SKAP1Q86WV1 359 aa9.21□□□□□ -0.93
MACF1-226ENST00000497964 MYH16Q9H6N6 1097 aa9.21□□□□□ -0.93
MACF1-226ENST00000497964 MS4A1P11836 297 aa9.21□□□□□ -0.93
MACF1-226ENST00000497964 L1TD1Q5T7N2 865 aaKnown RBP9.21□□□□□ -0.93
MACF1-226ENST00000497964 HSP90AB1P08238 724 aaKnown RBP9.21□□□□□ -0.94
MACF1-226ENST00000497964 BCL2L13Q9BXK5 485 aa9.2□□□□□ -0.94
MACF1-226ENST00000497964 CENPQQ7L2Z9 268 aaPredicted RBP9.2□□□□□ -0.94
MACF1-226ENST00000497964 PNISRQ8TF01 805 aaKnown RBP9.2□□□□□ -0.94
MACF1-226ENST00000497964 HSCBQ8IWL3 235 aa9.2□□□□□ -0.94
MACF1-226ENST00000497964 MORC1Q86VD1 984 aa9.19□□□□□ -0.94
MACF1-226ENST00000497964 PNNQ9H307 717 aaKnown RBP9.19□□□□□ -0.94
MACF1-226ENST00000497964 MFAP1P55081 439 aaKnown RBP9.19□□□□□ -0.94
MACF1-226ENST00000497964 NCOA2Q15596 1464 aa9.19□□□□□ -0.94
MACF1-226ENST00000497964 RRP7AQ9Y3A4 280 aaKnown RBP9.19□□□□□ -0.94
MACF1-226ENST00000497964 SAFB2Q14151 953 aaKnown RBP eCLIP9.19□□□□□ -0.94
MACF1-226ENST00000497964 TIAM1Q13009 1591 aa9.18□□□□□ -0.94
MACF1-226ENST00000497964 CFTRP13569 1480 aa9.18□□□□□ -0.94
MACF1-226ENST00000497964 MAPK8IP3Q9UPT6 1336 aa9.18□□□□□ -0.94
MACF1-226ENST00000497964 COG6Q9Y2V7 657 aa9.18□□□□□ -0.94
MACF1-226ENST00000497964 APAF1O14727 1248 aa9.18□□□□□ -0.94
MACF1-226ENST00000497964 BACH2Q9BYV9 841 aa9.18□□□□□ -0.94
MACF1-226ENST00000497964 CASKIN1Q8WXD9 1431 aa9.17□□□□□ -0.94
MACF1-226ENST00000497964 TOP2BQ02880 1626 aa9.17□□□□□ -0.94
MACF1-226ENST00000497964 HFM1A2PYH4 1435 aa9.17□□□□□ -0.94
MACF1-226ENST00000497964 GOLGA6L3A6NEY3 463 aa9.16□□□□□ -0.94
MACF1-226ENST00000497964 FRAT2O75474 233 aaPredicted RBP9.16□□□□□ -0.94
MACF1-226ENST00000497964 U2AF1L5P0DN76 240 aaPredicted RBP9.16□□□□□ -0.94
MACF1-226ENST00000497964 U2AF1Q01081 240 aaKnown RBP eCLIP9.16□□□□□ -0.94
MACF1-226ENST00000497964 FANCD2Q9BXW9 1451 aa9.16□□□□□ -0.94
MACF1-226ENST00000497964 CENPJQ9HC77 1338 aaPredicted RBP9.16□□□□□ -0.94
MACF1-226ENST00000497964 CUX1P39880 1505 aa9.16□□□□□ -0.94
MACF1-226ENST00000497964 FOXD4L1Q9NU39 408 aa9.16□□□□□ -0.94
MACF1-226ENST00000497964 NAIPQ13075 1403 aa9.15□□□□□ -0.94
MACF1-226ENST00000497964 MAPKBP1O60336 1514 aa9.15□□□□□ -0.94
MACF1-226ENST00000497964 PTMAP06454 111 aaKnown RBP9.15□□□□□ -0.94
MACF1-226ENST00000497964 ADAMTS8Q9UP79 889 aa9.15□□□□□ -0.94
MACF1-226ENST00000497964 RWDD1Q9H446 243 aaPredicted RBP9.15□□□□□ -0.94
MACF1-226ENST00000497964 DNTTIP2Q5QJE6 756 aaKnown RBP9.15□□□□□ -0.95
MACF1-226ENST00000497964 ITPRIPQ8IWB1 547 aa9.15□□□□□ -0.95
MACF1-226ENST00000497964 ZBTB7CA1YPR0 619 aa9.14□□□□□ -0.95
MACF1-226ENST00000497964 ARID3AQ99856 593 aa9.14□□□□□ -0.95
MACF1-226ENST00000497964 SMG6Q86US8 1419 aaKnown RBP9.13□□□□□ -0.95
MACF1-226ENST00000497964 APBB1O00213 710 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms