RNA–Protein interactions for RNA: ENST00000497957.1

PTK7-220, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 3

Gene PTK7, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-220ENST00000497957 MYO5CQ9NQX4 1742 aa24.35■■□□□ 1.49
PTK7-220ENST00000497957 ZNF777Q9ULD5 760 aaPredicted RBP24.34■■□□□ 1.49
PTK7-220ENST00000497957 CAMSAP2Q08AD1 1489 aa24.32■■□□□ 1.48
PTK7-220ENST00000497957 ARHGAP5Q13017 1502 aa24.3■■□□□ 1.48
PTK7-220ENST00000497957 SAMD9LQ8IVG5 1584 aa24.3■■□□□ 1.48
PTK7-220ENST00000497957 PLCH2O75038 1416 aa24.3■■□□□ 1.48
PTK7-220ENST00000497957 DIP2BQ9P265 1576 aa24.29■■□□□ 1.48
PTK7-220ENST00000497957 PTPRKQ15262 1439 aa24.28■■□□□ 1.48
PTK7-220ENST00000497957 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.26■■□□□ 1.47
PTK7-220ENST00000497957 GLI2P10070 1586 aa24.24■■□□□ 1.47
PTK7-220ENST00000497957 FAM69CQ0P6D2 419 aa24.23■■□□□ 1.47
PTK7-220ENST00000497957 CD109Q6YHK3 1445 aa24.23■■□□□ 1.47
PTK7-220ENST00000497957 MAP3K4Q9Y6R4 1608 aa24.22■■□□□ 1.47
PTK7-220ENST00000497957 KIF13AQ9H1H9 1805 aa24.21■■□□□ 1.47
PTK7-220ENST00000497957 ARHGEF12Q9NZN5 1544 aa24.2■■□□□ 1.47
PTK7-220ENST00000497957 HNRNPMP52272 730 aaKnown RBP eCLIP24.2■■□□□ 1.46
PTK7-220ENST00000497957 ABCC5O15440 1437 aa24.19■■□□□ 1.46
PTK7-220ENST00000497957 DNMT1P26358 1616 aaKnown RBP24.19■■□□□ 1.46
PTK7-220ENST00000497957 ARAP3Q8WWN8 1544 aa24.19■■□□□ 1.46
PTK7-220ENST00000497957 SYCP2Q9BX26 1530 aa24.19■■□□□ 1.46
PTK7-220ENST00000497957 EFCAB2Q5VUJ9 269 aa24.18■■□□□ 1.46
PTK7-220ENST00000497957 DAPK1P53355 1430 aa24.18■■□□□ 1.46
PTK7-220ENST00000497957 FANCAO15360 1455 aa24.17■■□□□ 1.46
PTK7-220ENST00000497957 MBD5Q9P267 1494 aa24.17■■□□□ 1.46
PTK7-220ENST00000497957 CHIC2Q9UKJ5 165 aa24.16■■□□□ 1.46
PTK7-220ENST00000497957 ABCC1P33527 1531 aa24.15■■□□□ 1.46
PTK7-220ENST00000497957 PPRC1Q5VV67 1664 aaKnown RBP24.15■■□□□ 1.46
PTK7-220ENST00000497957 TSPOAP1O95153 1857 aa24.14■■□□□ 1.45
PTK7-220ENST00000497957 CROCC2H7BZ55 1655 aa24.11■■□□□ 1.45
PTK7-220ENST00000497957 AKNAQ7Z591 1439 aa24.1■■□□□ 1.45
PTK7-220ENST00000497957 TRAPPC8Q9Y2L5 1435 aa24.1■■□□□ 1.45
PTK7-220ENST00000497957 ARHGEF5Q12774 1597 aa24.1■■□□□ 1.45
PTK7-220ENST00000497957 KIAA1107Q9UPP5 1409 aa24.07■■□□□ 1.44
PTK7-220ENST00000497957 ADGRL1O94910 1474 aa24.07■■□□□ 1.44
PTK7-220ENST00000497957 PLEKHH2Q8IVE3 1493 aa24.07■■□□□ 1.44
PTK7-220ENST00000497957 RRP7BPQ9NSQ0 103 aa24.06■■□□□ 1.44
PTK7-220ENST00000497957 SCAPERQ9BY12 1400 aa24.06■■□□□ 1.44
PTK7-220ENST00000497957 CCDC141Q6ZP82 1450 aa24.06■■□□□ 1.44
PTK7-220ENST00000497957 CFAP74Q9C0B2 1584 aa24.03■■□□□ 1.44
PTK7-220ENST00000497957 C9orf84Q5VXU9 1444 aa24.02■■□□□ 1.44
PTK7-220ENST00000497957 AFAP1Q8N556 730 aa24.02■■□□□ 1.44
PTK7-220ENST00000497957 NEO1Q92859 1461 aa24.01■■□□□ 1.43
PTK7-220ENST00000497957 KDM6BO15054 1643 aa24.01■■□□□ 1.43
PTK7-220ENST00000497957 ADGBQ8N7X0 1667 aa24■■□□□ 1.43
PTK7-220ENST00000497957 SHANK2Q9UPX8 1470 aa24■■□□□ 1.43
PTK7-220ENST00000497957 TRHP20396 242 aaPredicted RBP23.99■■□□□ 1.43
PTK7-220ENST00000497957 NAIPQ13075 1403 aa23.99■■□□□ 1.43
PTK7-220ENST00000497957 SETD5Q9C0A6 1442 aa23.98■■□□□ 1.43
PTK7-220ENST00000497957 ADGRL2O95490 1459 aa23.97■■□□□ 1.43
PTK7-220ENST00000497957 RAB3GAP2Q9H2M9 1393 aa23.97■■□□□ 1.43
PTK7-220ENST00000497957 MAST1Q9Y2H9 1570 aa23.96■■□□□ 1.43
PTK7-220ENST00000497957 HFM1A2PYH4 1435 aa23.96■■□□□ 1.43
PTK7-220ENST00000497957 GCC2Q8IWJ2 1684 aa23.95■■□□□ 1.43
PTK7-220ENST00000497957 NCOA1Q15788 1441 aa23.95■■□□□ 1.42
PTK7-220ENST00000497957 ROCK1Q13464 1354 aa23.95■■□□□ 1.42
PTK7-220ENST00000497957 POGZQ7Z3K3 1410 aa23.94■■□□□ 1.42
PTK7-220ENST00000497957 RAPGEF3O95398 923 aa23.94■■□□□ 1.42
PTK7-220ENST00000497957 TSPY4P0CV99 314 aa23.94■■□□□ 1.42
PTK7-220ENST00000497957 TSPY10P0CW01 314 aa23.94■■□□□ 1.42
PTK7-220ENST00000497957 FRMPD1Q5SYB0 1578 aa23.93■■□□□ 1.42
PTK7-220ENST00000497957 RSPH4AQ5TD94 716 aa23.92■■□□□ 1.42
PTK7-220ENST00000497957 TEX14Q8IWB6 1497 aa23.92■■□□□ 1.42
PTK7-220ENST00000497957 DENND4BO75064 1496 aaPredicted RBP23.91■■□□□ 1.42
PTK7-220ENST00000497957 COL17A1Q9UMD9 1497 aaPredicted RBP23.91■■□□□ 1.42
PTK7-220ENST00000497957 INO80Q9ULG1 1556 aaPredicted RBP23.91■■□□□ 1.42
PTK7-220ENST00000497957 ZFYVE16Q7Z3T8 1539 aa23.9■■□□□ 1.42
PTK7-220ENST00000497957 SPAG9O60271 1321 aaKnown RBP23.9■■□□□ 1.42
PTK7-220ENST00000497957 RICTORQ6R327 1708 aa23.9■■□□□ 1.42
PTK7-220ENST00000497957 ANKRD30AQ9BXX3 1397 aa23.9■■□□□ 1.42
PTK7-220ENST00000497957 KDM5CP41229 1560 aa23.88■■□□□ 1.41
PTK7-220ENST00000497957 ZNF518AQ6AHZ1 1483 aa23.87■■□□□ 1.41
PTK7-220ENST00000497957 ATP7AQ04656 1500 aa23.87■■□□□ 1.41
PTK7-220ENST00000497957 KIF15Q9NS87 1388 aa23.87■■□□□ 1.41
PTK7-220ENST00000497957 KIDINS220Q9ULH0 1771 aa23.86■■□□□ 1.41
PTK7-220ENST00000497957 PLXNC1O60486 1568 aa23.86■■□□□ 1.41
PTK7-220ENST00000497957 RTEL1-TNFRSF6BF6WH68 1400 aa23.82■■□□□ 1.4
PTK7-220ENST00000497957 MYT1LQ9UL68 1186 aa23.81■■□□□ 1.4
PTK7-220ENST00000497957 HECW2Q9P2P5 1572 aa23.81■■□□□ 1.4
PTK7-220ENST00000497957 ANKRD50Q9ULJ7 1429 aa23.79■■□□□ 1.4
PTK7-220ENST00000497957 ABCA6Q8N139 1617 aa23.79■■□□□ 1.4
PTK7-220ENST00000497957 YEATS2Q9ULM3 1422 aa23.78■■□□□ 1.4
PTK7-220ENST00000497957 MLH3Q9UHC1 1453 aa23.78■■□□□ 1.4
PTK7-220ENST00000497957 DHX57Q6P158 1386 aaKnown RBP23.77■■□□□ 1.4
PTK7-220ENST00000497957 DUOX2Q9NRD8 1548 aa23.75■■□□□ 1.39
PTK7-220ENST00000497957 ZMYM4Q5VZL5 1548 aa23.74■■□□□ 1.39
PTK7-220ENST00000497957 DIP2CQ9Y2E4 1556 aa23.74■■□□□ 1.39
PTK7-220ENST00000497957 HRCP23327 699 aa23.73■■□□□ 1.39
PTK7-220ENST00000497957 CCER1Q8TC90 406 aaPredicted RBP23.71■■□□□ 1.39
PTK7-220ENST00000497957 TRIM52Q96A61 297 aa23.71■■□□□ 1.39
PTK7-220ENST00000497957 A2MP01023 1474 aa23.68■■□□□ 1.38
PTK7-220ENST00000497957 DHX29Q7Z478 1369 aaKnown RBP23.67■■□□□ 1.38
PTK7-220ENST00000497957 ERBINQ96RT1 1412 aa23.67■■□□□ 1.38
PTK7-220ENST00000497957 PZPP20742 1482 aa23.65■■□□□ 1.38
PTK7-220ENST00000497957 SIGLEC1Q9BZZ2 1709 aa23.64■■□□□ 1.37
PTK7-220ENST00000497957 UNC13BO14795 1591 aa23.63■■□□□ 1.37
PTK7-220ENST00000497957 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.62■■□□□ 1.379e-6■□□□□ 10.7
PTK7-220ENST00000497957 MAGI2Q86UL8 1455 aa23.61■■□□□ 1.37
PTK7-220ENST00000497957 ARHGEF40Q8TER5 1519 aa23.6■■□□□ 1.37
PTK7-220ENST00000497957 KIF3BO15066 747 aa23.6■■□□□ 1.37
PTK7-220ENST00000497957 NUP155O75694 1391 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms