RNA–Protein interactions for RNA: ENST00000497871.1

ATPAF2-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-209ENST00000497871 ZFYVE16Q7Z3T8 1539 aa29.82■■■□□ 2.36
ATPAF2-209ENST00000497871 MADDQ8WXG6 1647 aa29.81■■■□□ 2.36
ATPAF2-209ENST00000497871 CLIP1P30622 1438 aa29.79■■■□□ 2.36
ATPAF2-209ENST00000497871 KIF14Q15058 1648 aa29.74■■■□□ 2.35
ATPAF2-209ENST00000497871 CASKIN1Q8WXD9 1431 aa29.73■■■□□ 2.35
ATPAF2-209ENST00000497871 MYO5CQ9NQX4 1742 aa29.73■■■□□ 2.35
ATPAF2-209ENST00000497871 MLECQ14165 292 aa29.72■■■□□ 2.35
ATPAF2-209ENST00000497871 ATP10AO60312 1499 aa29.72■■■□□ 2.35
ATPAF2-209ENST00000497871 AFAP1Q8N556 730 aa29.7■■■□□ 2.35
ATPAF2-209ENST00000497871 ARHGAP5Q13017 1502 aa29.69■■■□□ 2.34
ATPAF2-209ENST00000497871 RIMS1Q86UR5 1692 aaKnown RBP29.68■■■□□ 2.34
ATPAF2-209ENST00000497871 CCDC18Q5T9S5 1454 aa29.68■■■□□ 2.34
ATPAF2-209ENST00000497871 ZNF518AQ6AHZ1 1483 aa29.68■■■□□ 2.34
ATPAF2-209ENST00000497871 PCF11O94913 1555 aaKnown RBP29.67■■■□□ 2.34
ATPAF2-209ENST00000497871 LMTK3Q96Q04 1460 aa29.67■■■□□ 2.34
ATPAF2-209ENST00000497871 PLPPR3Q6T4P5 718 aa29.66■■■□□ 2.34
ATPAF2-209ENST00000497871 SIGLEC1Q9BZZ2 1709 aa29.65■■■□□ 2.34
ATPAF2-209ENST00000497871 C9orf84Q5VXU9 1444 aa29.65■■■□□ 2.34
ATPAF2-209ENST00000497871 LRRIQ1Q96JM4 1722 aa29.65■■■□□ 2.34
ATPAF2-209ENST00000497871 MYT1LQ9UL68 1186 aa29.62■■■□□ 2.33
ATPAF2-209ENST00000497871 KDM5CP41229 1560 aa29.58■■■□□ 2.33
ATPAF2-209ENST00000497871 FYCO1Q9BQS8 1478 aa29.57■■■□□ 2.32
ATPAF2-209ENST00000497871 HSPA2P54652 639 aa29.56■■■□□ 2.32
ATPAF2-209ENST00000497871 ARHGEF12Q9NZN5 1544 aa29.55■■■□□ 2.32
ATPAF2-209ENST00000497871 MLH3Q9UHC1 1453 aa29.54■■■□□ 2.32
ATPAF2-209ENST00000497871 CDC42BPBQ9Y5S2 1711 aa29.54■■■□□ 2.32
ATPAF2-209ENST00000497871 FBXO41Q8TF61 875 aa29.52■■■□□ 2.32
ATPAF2-209ENST00000497871 TRAPPC8Q9Y2L5 1435 aa29.52■■■□□ 2.32
ATPAF2-209ENST00000497871 FER1L4A9Z1Z3 1794 aa29.5■■■□□ 2.31
ATPAF2-209ENST00000497871 PREX2Q70Z35 1606 aa29.49■■■□□ 2.31
ATPAF2-209ENST00000497871 CEBPAP49715 358 aaPredicted RBP29.49■■■□□ 2.31
ATPAF2-209ENST00000497871 ABCC1P33527 1531 aa29.47■■■□□ 2.31
ATPAF2-209ENST00000497871 ZNF777Q9ULD5 760 aaPredicted RBP29.46■■■□□ 2.31
ATPAF2-209ENST00000497871 DIP2CQ9Y2E4 1556 aa29.45■■■□□ 2.31
ATPAF2-209ENST00000497871 REREQ9P2R6 1566 aa29.44■■■□□ 2.3
ATPAF2-209ENST00000497871 GPATCH8Q9UKJ3 1502 aaKnown RBP29.42■■■□□ 2.3
ATPAF2-209ENST00000497871 CDC42BPAQ5VT25 1732 aa29.39■■■□□ 2.3
ATPAF2-209ENST00000497871 AGLP35573 1532 aa29.39■■■□□ 2.3
ATPAF2-209ENST00000497871 ABCA6Q8N139 1617 aa29.38■■■□□ 2.29
ATPAF2-209ENST00000497871 ESF1Q9H501 851 aaKnown RBP29.38■■■□□ 2.29
ATPAF2-209ENST00000497871 CFDP1Q9UEE9 299 aaPredicted RBP29.38■■■□□ 2.29
ATPAF2-209ENST00000497871 ITSN2Q9NZM3 1697 aa29.37■■■□□ 2.29
ATPAF2-209ENST00000497871 HNRNPMP52272 730 aaKnown RBP eCLIP29.37■■■□□ 2.29
ATPAF2-209ENST00000497871 SPAG9O60271 1321 aaKnown RBP29.34■■■□□ 2.29
ATPAF2-209ENST00000497871 MTUS2Q5JR59 1369 aa29.34■■■□□ 2.29
ATPAF2-209ENST00000497871 CCNB3Q8WWL7 1395 aa29.34■■■□□ 2.29
ATPAF2-209ENST00000497871 KIAA1107Q9UPP5 1409 aa29.33■■■□□ 2.29
ATPAF2-209ENST00000497871 KIDINS220Q9ULH0 1771 aa29.31■■■□□ 2.28
ATPAF2-209ENST00000497871 SAMD9LQ8IVG5 1584 aa29.31■■■□□ 2.28
ATPAF2-209ENST00000497871 PLEKHH2Q8IVE3 1493 aa29.29■■■□□ 2.28
ATPAF2-209ENST00000497871 PREX1Q8TCU6 1659 aa29.29■■■□□ 2.28
ATPAF2-209ENST00000497871 UHRF1BP1Q6BDS2 1440 aa29.28■■■□□ 2.28
ATPAF2-209ENST00000497871 DMRT2Q9Y5R5 561 aa29.28■■■□□ 2.28
ATPAF2-209ENST00000497871 SYCP2Q9BX26 1530 aa29.28■■■□□ 2.28
ATPAF2-209ENST00000497871 SETD1BQ9UPS6 1966 aaKnown RBP29.27■■■□□ 2.28
ATPAF2-209ENST00000497871 CNTLNQ9NXG0 1405 aa29.26■■■□□ 2.27
ATPAF2-209ENST00000497871 CERKQ8TCT0 537 aa29.24■■■□□ 2.27
ATPAF2-209ENST00000497871 CEP162Q5TB80 1403 aa29.22■■■□□ 2.27
ATPAF2-209ENST00000497871 ZNF644Q9H582 1327 aaPredicted RBP29.19■■■□□ 2.26
ATPAF2-209ENST00000497871 C3P01024 1663 aa29.18■■■□□ 2.26
ATPAF2-209ENST00000497871 ATP7AQ04656 1500 aa29.17■■■□□ 2.26
ATPAF2-209ENST00000497871 ZMYM3Q14202 1370 aa29.16■■■□□ 2.26
ATPAF2-209ENST00000497871 EHBP1L1Q8N3D4 1523 aa29.15■■■□□ 2.26
ATPAF2-209ENST00000497871 A2MP01023 1474 aa29.15■■■□□ 2.26
ATPAF2-209ENST00000497871 MBD5Q9P267 1494 aa29.11■■■□□ 2.25
ATPAF2-209ENST00000497871 TIAM1Q13009 1591 aa29.11■■■□□ 2.25
ATPAF2-209ENST00000497871 INO80Q9ULG1 1556 aaPredicted RBP29.11■■■□□ 2.25
ATPAF2-209ENST00000497871 GGT6Q6P531 493 aa29.11■■■□□ 2.25
ATPAF2-209ENST00000497871 PPP6R1Q9UPN7 881 aa29.11■■■□□ 2.25
ATPAF2-209ENST00000497871 NPATQ14207 1427 aa29.11■■■□□ 2.25
ATPAF2-209ENST00000497871 STRCQ7RTU9 1775 aa29.1■■■□□ 2.25
ATPAF2-209ENST00000497871 PLXNC1O60486 1568 aa29.08■■■□□ 2.25
ATPAF2-209ENST00000497871 SUPT6HQ7KZ85 1726 aaKnown RBP29.08■■■□□ 2.25
ATPAF2-209ENST00000497871 RTEL1-TNFRSF6BF6WH68 1400 aa29.07■■■□□ 2.24
ATPAF2-209ENST00000497871 PTPRTO14522 1441 aa29.07■■■□□ 2.24
ATPAF2-209ENST00000497871 RSPH4AQ5TD94 716 aa29.06■■■□□ 2.24
ATPAF2-209ENST00000497871 MROH2AA6NES4 1674 aa29.05■■■□□ 2.24
ATPAF2-209ENST00000497871 NCOA2Q15596 1464 aa29.03■■■□□ 2.24
ATPAF2-209ENST00000497871 LOC105371045A0A1W2PR82 267 aa29.02■■■□□ 2.24
ATPAF2-209ENST00000497871 DHX29Q7Z478 1369 aaKnown RBP29.01■■■□□ 2.24
ATPAF2-209ENST00000497871 NCOA1Q15788 1441 aa29■■■□□ 2.23
ATPAF2-209ENST00000497871 PTPRKQ15262 1439 aa28.97■■■□□ 2.23
ATPAF2-209ENST00000497871 ADGBQ8N7X0 1667 aa28.97■■■□□ 2.23
ATPAF2-209ENST00000497871 CCDC141Q6ZP82 1450 aa28.95■■■□□ 2.22
ATPAF2-209ENST00000497871 CLTCQ00610 1675 aaKnown RBP28.95■■■□□ 2.22
ATPAF2-209ENST00000497871 VPS8Q8N3P4 1428 aa28.94■■■□□ 2.22
ATPAF2-209ENST00000497871 CAMSAP2Q08AD1 1489 aa28.93■■■□□ 2.22
ATPAF2-209ENST00000497871 KIF3BO15066 747 aa28.93■■■□□ 2.22
ATPAF2-209ENST00000497871 TSPY4P0CV99 314 aa28.92■■■□□ 2.22
ATPAF2-209ENST00000497871 TSPY10P0CW01 314 aa28.92■■■□□ 2.22
ATPAF2-209ENST00000497871 CAMSAP1Q5T5Y3 1602 aa28.91■■■□□ 2.22
ATPAF2-209ENST00000497871 NCKAP5LQ9HCH0 1330 aa28.9■■■□□ 2.22
ATPAF2-209ENST00000497871 PKD2Q13563 968 aa28.89■■■□□ 2.22
ATPAF2-209ENST00000497871 LRRC9Q6ZRR7 1453 aa28.89■■■□□ 2.22
ATPAF2-209ENST00000497871 KANK4Q5T7N3 995 aaPredicted RBP28.84■■■□□ 2.21
ATPAF2-209ENST00000497871 PLA2R1Q13018 1463 aa28.84■■■□□ 2.21
ATPAF2-209ENST00000497871 LTBP4Q8N2S1 1624 aa28.83■■■□□ 2.21
ATPAF2-209ENST00000497871 WASHC2CQ9Y4E1 1318 aa28.83■■■□□ 2.21
ATPAF2-209ENST00000497871 ARHGEF5Q12774 1597 aa28.82■■■□□ 2.2
ATPAF2-209ENST00000497871 MYO3AQ8NEV4 1616 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms