RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 MYO5CQ9NQX4 1742 aa25.37■■□□□ 1.65
CTDSP1-214ENST00000497677 POGZQ7Z3K3 1410 aa25.36■■□□□ 1.65
CTDSP1-214ENST00000497677 GPATCH8Q9UKJ3 1502 aaKnown RBP25.35■■□□□ 1.65
CTDSP1-214ENST00000497677 RICTORQ6R327 1708 aa25.33■■□□□ 1.65
CTDSP1-214ENST00000497677 AFAP1Q8N556 730 aa25.32■■□□□ 1.64
CTDSP1-214ENST00000497677 ZMYM4Q5VZL5 1548 aa25.31■■□□□ 1.64
CTDSP1-214ENST00000497677 YEATS2Q9ULM3 1422 aa25.29■■□□□ 1.64
CTDSP1-214ENST00000497677 CDC42BPBQ9Y5S2 1711 aa25.29■■□□□ 1.64
CTDSP1-214ENST00000497677 PREX2Q70Z35 1606 aa25.29■■□□□ 1.64
CTDSP1-214ENST00000497677 CCNB3Q8WWL7 1395 aa25.29■■□□□ 1.64
CTDSP1-214ENST00000497677 MAGI2Q86UL8 1455 aa25.28■■□□□ 1.64
CTDSP1-214ENST00000497677 ARHGEF12Q9NZN5 1544 aa25.28■■□□□ 1.64
CTDSP1-214ENST00000497677 EHBP1L1Q8N3D4 1523 aa25.27■■□□□ 1.64
CTDSP1-214ENST00000497677 CFDP1Q9UEE9 299 aaPredicted RBP25.27■■□□□ 1.64
CTDSP1-214ENST00000497677 ZNF777Q9ULD5 760 aaPredicted RBP25.25■■□□□ 1.63
CTDSP1-214ENST00000497677 TRAPPC8Q9Y2L5 1435 aa25.25■■□□□ 1.63
CTDSP1-214ENST00000497677 ZNF518AQ6AHZ1 1483 aa25.25■■□□□ 1.63
CTDSP1-214ENST00000497677 TIAM1Q13009 1591 aa25.24■■□□□ 1.63
CTDSP1-214ENST00000497677 KANK4Q5T7N3 995 aaPredicted RBP25.24■■□□□ 1.63
CTDSP1-214ENST00000497677 CDC42BPAQ5VT25 1732 aa25.23■■□□□ 1.63
CTDSP1-214ENST00000497677 ARHGEF40Q8TER5 1519 aa25.23■■□□□ 1.63
CTDSP1-214ENST00000497677 ABCC1P33527 1531 aa25.22■■□□□ 1.63
CTDSP1-214ENST00000497677 MAP3K1Q13233 1512 aa25.22■■□□□ 1.63
CTDSP1-214ENST00000497677 ZFYVE16Q7Z3T8 1539 aa25.22■■□□□ 1.63
CTDSP1-214ENST00000497677 LRRC9Q6ZRR7 1453 aa25.21■■□□□ 1.63
CTDSP1-214ENST00000497677 HNRNPMP52272 730 aaKnown RBP eCLIP25.2■■□□□ 1.62
CTDSP1-214ENST00000497677 KDM5CP41229 1560 aa25.19■■□□□ 1.62
CTDSP1-214ENST00000497677 ARID4BQ4LE39 1312 aaPredicted RBP25.19■■□□□ 1.62
CTDSP1-214ENST00000497677 NCOA2Q15596 1464 aa25.19■■□□□ 1.62
CTDSP1-214ENST00000497677 KIAA1107Q9UPP5 1409 aa25.19■■□□□ 1.62
CTDSP1-214ENST00000497677 ZNF644Q9H582 1327 aaPredicted RBP25.18■■□□□ 1.62
CTDSP1-214ENST00000497677 SAMD9LQ8IVG5 1584 aa25.18■■□□□ 1.62
CTDSP1-214ENST00000497677 ATP10AO60312 1499 aa25.16■■□□□ 1.62
CTDSP1-214ENST00000497677 MLH3Q9UHC1 1453 aa25.16■■□□□ 1.62
CTDSP1-214ENST00000497677 PLEKHH2Q8IVE3 1493 aa25.13■■□□□ 1.61
CTDSP1-214ENST00000497677 SYCP2Q9BX26 1530 aa25.12■■□□□ 1.61
CTDSP1-214ENST00000497677 C9orf84Q5VXU9 1444 aa25.11■■□□□ 1.61
CTDSP1-214ENST00000497677 MYT1LQ9UL68 1186 aa25.1■■□□□ 1.61
CTDSP1-214ENST00000497677 ITSN2Q9NZM3 1697 aa25.1■■□□□ 1.61
CTDSP1-214ENST00000497677 ADAMTSL3P82987 1691 aa25.09■■□□□ 1.61
CTDSP1-214ENST00000497677 MBD5Q9P267 1494 aa25.09■■□□□ 1.61
CTDSP1-214ENST00000497677 SUPT6HQ7KZ85 1726 aaKnown RBP25.08■■□□□ 1.61
CTDSP1-214ENST00000497677 SIGLEC1Q9BZZ2 1709 aa25.08■■□□□ 1.61
CTDSP1-214ENST00000497677 HECW2Q9P2P5 1572 aa25.07■■□□□ 1.6
CTDSP1-214ENST00000497677 APLP2Q06481 763 aa25.07■■□□□ 1.6
CTDSP1-214ENST00000497677 SPAG9O60271 1321 aaKnown RBP25.07■■□□□ 1.6
CTDSP1-214ENST00000497677 BCORL1Q5H9F3 1711 aa25.06■■□□□ 1.6
CTDSP1-214ENST00000497677 MLECQ14165 292 aa25.04■■□□□ 1.6
CTDSP1-214ENST00000497677 DIP2CQ9Y2E4 1556 aa25.04■■□□□ 1.6
CTDSP1-214ENST00000497677 PTPRMP28827 1452 aa25.02■■□□□ 1.6
CTDSP1-214ENST00000497677 KIDINS220Q9ULH0 1771 aa25■■□□□ 1.59
CTDSP1-214ENST00000497677 ABCA6Q8N139 1617 aa25■■□□□ 1.59
CTDSP1-214ENST00000497677 REREQ9P2R6 1566 aa24.99■■□□□ 1.59
CTDSP1-214ENST00000497677 CAMSAP2Q08AD1 1489 aa24.98■■□□□ 1.59
CTDSP1-214ENST00000497677 RSPH4AQ5TD94 716 aa24.98■■□□□ 1.59
CTDSP1-214ENST00000497677 MYOM3Q5VTT5 1437 aa24.97■■□□□ 1.59
CTDSP1-214ENST00000497677 MADDQ8WXG6 1647 aa24.97■■□□□ 1.59
CTDSP1-214ENST00000497677 MIA2Q96PC5 1412 aa24.95■■□□□ 1.59
CTDSP1-214ENST00000497677 AGLP35573 1532 aa24.95■■□□□ 1.58
CTDSP1-214ENST00000497677 ATP7AQ04656 1500 aa24.94■■□□□ 1.58
CTDSP1-214ENST00000497677 RTEL1-TNFRSF6BF6WH68 1400 aa24.94■■□□□ 1.58
CTDSP1-214ENST00000497677 INO80Q9ULG1 1556 aaPredicted RBP24.92■■□□□ 1.58
CTDSP1-214ENST00000497677 CCDC141Q6ZP82 1450 aa24.91■■□□□ 1.58
CTDSP1-214ENST00000497677 A2MP01023 1474 aa24.88■■□□□ 1.57
CTDSP1-214ENST00000497677 ARHGEF5Q12774 1597 aa24.86■■□□□ 1.57
CTDSP1-214ENST00000497677 TSPY4P0CV99 314 aa24.86■■□□□ 1.57
CTDSP1-214ENST00000497677 TSPY10P0CW01 314 aa24.86■■□□□ 1.57
CTDSP1-214ENST00000497677 RIMS1Q86UR5 1692 aaKnown RBP24.85■■□□□ 1.57
CTDSP1-214ENST00000497677 DHX29Q7Z478 1369 aaKnown RBP24.83■■□□□ 1.57
CTDSP1-214ENST00000497677 CEBPAP49715 358 aaPredicted RBP24.83■■□□□ 1.57
CTDSP1-214ENST00000497677 PLXNC1O60486 1568 aa24.83■■□□□ 1.57
CTDSP1-214ENST00000497677 PLPPR3Q6T4P5 718 aa24.82■■□□□ 1.56
CTDSP1-214ENST00000497677 FGD6Q6ZV73 1430 aa24.82■■□□□ 1.56
CTDSP1-214ENST00000497677 TCOF1Q13428 1488 aaKnown RBP24.77■■□□□ 1.56
CTDSP1-214ENST00000497677 FER1L4A9Z1Z3 1794 aa24.77■■□□□ 1.56
CTDSP1-214ENST00000497677 ABCC5O15440 1437 aa24.77■■□□□ 1.56
CTDSP1-214ENST00000497677 GGT6Q6P531 493 aa24.76■■□□□ 1.55
CTDSP1-214ENST00000497677 ESF1Q9H501 851 aaKnown RBP24.75■■□□□ 1.55
CTDSP1-214ENST00000497677 PPP6R1Q9UPN7 881 aa24.74■■□□□ 1.55
CTDSP1-214ENST00000497677 PTPN23Q9H3S7 1636 aa24.74■■□□□ 1.55
CTDSP1-214ENST00000497677 CNTLNQ9NXG0 1405 aa24.73■■□□□ 1.55
CTDSP1-214ENST00000497677 ADGBQ8N7X0 1667 aa24.72■■□□□ 1.55
CTDSP1-214ENST00000497677 MAST1Q9Y2H9 1570 aa24.72■■□□□ 1.55
CTDSP1-214ENST00000497677 KIF3BO15066 747 aa24.72■■□□□ 1.55
CTDSP1-214ENST00000497677 LMTK3Q96Q04 1460 aa24.71■■□□□ 1.55
CTDSP1-214ENST00000497677 ZMYM3Q14202 1370 aa24.7■■□□□ 1.55
CTDSP1-214ENST00000497677 PPARGC1BQ86YN6 1023 aaKnown RBP24.69■■□□□ 1.54
CTDSP1-214ENST00000497677 DAPK1P53355 1430 aa24.69■■□□□ 1.54
CTDSP1-214ENST00000497677 SHANK2Q9UPX8 1470 aa24.66■■□□□ 1.54
CTDSP1-214ENST00000497677 FAM50AQ14320 339 aaKnown RBP24.65■■□□□ 1.54
CTDSP1-214ENST00000497677 HSPA2P54652 639 aa24.64■■□□□ 1.54
CTDSP1-214ENST00000497677 RRP7BPQ9NSQ0 103 aa24.63■■□□□ 1.53
CTDSP1-214ENST00000497677 CHIC2Q9UKJ5 165 aa24.62■■□□□ 1.53
CTDSP1-214ENST00000497677 DNMT1P26358 1616 aaKnown RBP24.61■■□□□ 1.53
CTDSP1-214ENST00000497677 KIF15Q9NS87 1388 aa24.61■■□□□ 1.53
CTDSP1-214ENST00000497677 C3P01024 1663 aa24.6■■□□□ 1.53
CTDSP1-214ENST00000497677 DUOX2Q9NRD8 1548 aa24.58■■□□□ 1.53
CTDSP1-214ENST00000497677 NPATQ14207 1427 aa24.58■■□□□ 1.53
CTDSP1-214ENST00000497677 NCOA1Q15788 1441 aa24.58■■□□□ 1.53
CTDSP1-214ENST00000497677 WASHC2CQ9Y4E1 1318 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms