RNA–Protein interactions for RNA: ENST00000497663.1

TNRC18-210, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-210ENST00000497663 RAPGEF6Q8TEU7 1601 aa25.4■■□□□ 1.66
TNRC18-210ENST00000497663 NUP153P49790 1475 aaKnown RBP25.4■■□□□ 1.66
TNRC18-210ENST00000497663 ABCA9Q8IUA7 1624 aa25.31■■□□□ 1.64
TNRC18-210ENST00000497663 KIF21BO75037 1637 aa25.3■■□□□ 1.64
TNRC18-210ENST00000497663 ZBTB12Q9Y330 459 aaPredicted RBP25.3■■□□□ 1.64
TNRC18-210ENST00000497663 ARAP3Q8WWN8 1544 aa25.28■■□□□ 1.64
TNRC18-210ENST00000497663 RAPGEF3O95398 923 aa25.27■■□□□ 1.64
TNRC18-210ENST00000497663 EFCAB5A4FU69 1503 aa25.19■■□□□ 1.62
TNRC18-210ENST00000497663 CDK13Q14004 1512 aaKnown RBP25.18■■□□□ 1.62
TNRC18-210ENST00000497663 UBTFP17480 764 aaKnown RBP25.18■■□□□ 1.62
TNRC18-210ENST00000497663 FRMPD1Q5SYB0 1578 aa25.18■■□□□ 1.62
TNRC18-210ENST00000497663 PLEKHD1A6NEE1 506 aa25.16■■□□□ 1.62
TNRC18-210ENST00000497663 NEO1Q92859 1461 aa25.15■■□□□ 1.62
TNRC18-210ENST00000497663 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.13■■□□□ 1.61
TNRC18-210ENST00000497663 ARHGAP35Q9NRY4 1499 aa25.13■■□□□ 1.61
TNRC18-210ENST00000497663 PHLDB1Q86UU1 1377 aa25.12■■□□□ 1.61
TNRC18-210ENST00000497663 HECW2Q9P2P5 1572 aa25.12■■□□□ 1.61
TNRC18-210ENST00000497663 TTC37Q6PGP7 1564 aa25.11■■□□□ 1.61
TNRC18-210ENST00000497663 MKRN4PQ13434 485 aaPredicted RBP25.07■■□□□ 1.6
TNRC18-210ENST00000497663 ATP1B4Q9UN42 357 aaPredicted RBP25.07■■□□□ 1.6
TNRC18-210ENST00000497663 AKNAQ7Z591 1439 aa25.06■■□□□ 1.6
TNRC18-210ENST00000497663 FANCAO15360 1455 aa25.04■■□□□ 1.6
TNRC18-210ENST00000497663 DENND4BO75064 1496 aaPredicted RBP25.01■■□□□ 1.59
TNRC18-210ENST00000497663 ADAMTSL3P82987 1691 aa25.01■■□□□ 1.59
TNRC18-210ENST00000497663 RICTORQ6R327 1708 aa25■■□□□ 1.59
TNRC18-210ENST00000497663 PTPRMP28827 1452 aa24.97■■□□□ 1.59
TNRC18-210ENST00000497663 FMN1Q68DA7 1419 aa24.97■■□□□ 1.59
TNRC18-210ENST00000497663 YEATS2Q9ULM3 1422 aa24.96■■□□□ 1.59
TNRC18-210ENST00000497663 SIGLEC1Q9BZZ2 1709 aa24.95■■□□□ 1.59
TNRC18-210ENST00000497663 ARID4BQ4LE39 1312 aaPredicted RBP24.95■■□□□ 1.58
TNRC18-210ENST00000497663 ARHGEF40Q8TER5 1519 aa24.95■■□□□ 1.58
TNRC18-210ENST00000497663 PLCH2O75038 1416 aa24.95■■□□□ 1.58
TNRC18-210ENST00000497663 KIF14Q15058 1648 aa24.94■■□□□ 1.58
TNRC18-210ENST00000497663 HECW1Q76N89 1606 aa24.94■■□□□ 1.58
TNRC18-210ENST00000497663 ILDR1Q86SU0 546 aaPredicted RBP24.94■■□□□ 1.58
TNRC18-210ENST00000497663 LRRIQ1Q96JM4 1722 aa24.94■■□□□ 1.58
TNRC18-210ENST00000497663 BCORL1Q5H9F3 1711 aa24.93■■□□□ 1.58
TNRC18-210ENST00000497663 MADDQ8WXG6 1647 aa24.92■■□□□ 1.58
TNRC18-210ENST00000497663 SCAPERQ9BY12 1400 aa24.91■■□□□ 1.58
TNRC18-210ENST00000497663 CFAP74Q9C0B2 1584 aa24.88■■□□□ 1.57
TNRC18-210ENST00000497663 ZMYM4Q5VZL5 1548 aa24.88■■□□□ 1.57
TNRC18-210ENST00000497663 POGZQ7Z3K3 1410 aa24.86■■□□□ 1.57
TNRC18-210ENST00000497663 TROQ12816 1431 aaPredicted RBP24.86■■□□□ 1.57
TNRC18-210ENST00000497663 ZFYVE16Q7Z3T8 1539 aa24.85■■□□□ 1.57
TNRC18-210ENST00000497663 PCF11O94913 1555 aaKnown RBP24.83■■□□□ 1.57
TNRC18-210ENST00000497663 MLECQ14165 292 aa24.81■■□□□ 1.56
TNRC18-210ENST00000497663 EFCAB2Q5VUJ9 269 aa24.81■■□□□ 1.56
TNRC18-210ENST00000497663 RIMS1Q86UR5 1692 aaKnown RBP24.81■■□□□ 1.56
TNRC18-210ENST00000497663 CDK11AQ9UQ88 783 aaPredicted RBP24.8■■□□□ 1.56
TNRC18-210ENST00000497663 MYO5CQ9NQX4 1742 aa24.79■■□□□ 1.56
TNRC18-210ENST00000497663 AFAP1Q8N556 730 aa24.79■■□□□ 1.56
TNRC18-210ENST00000497663 CASKIN1Q8WXD9 1431 aa24.78■■□□□ 1.56
TNRC18-210ENST00000497663 MAGI2Q86UL8 1455 aa24.77■■□□□ 1.56
TNRC18-210ENST00000497663 ARHGAP5Q13017 1502 aa24.76■■□□□ 1.55
TNRC18-210ENST00000497663 FKBP8Q14318 412 aa24.75■■□□□ 1.55
TNRC18-210ENST00000497663 LMTK3Q96Q04 1460 aa24.75■■□□□ 1.55
TNRC18-210ENST00000497663 ARHGEF12Q9NZN5 1544 aa24.73■■□□□ 1.55
TNRC18-210ENST00000497663 CLIP1P30622 1438 aa24.72■■□□□ 1.55
TNRC18-210ENST00000497663 ATP10AO60312 1499 aa24.71■■□□□ 1.55
TNRC18-210ENST00000497663 CDC42BPBQ9Y5S2 1711 aa24.71■■□□□ 1.55
TNRC18-210ENST00000497663 HSPA2P54652 639 aa24.7■■□□□ 1.54
TNRC18-210ENST00000497663 TRAPPC8Q9Y2L5 1435 aa24.69■■□□□ 1.54
TNRC18-210ENST00000497663 C9orf84Q5VXU9 1444 aa24.67■■□□□ 1.54
TNRC18-210ENST00000497663 KDM5CP41229 1560 aa24.67■■□□□ 1.54
TNRC18-210ENST00000497663 CCDC18Q5T9S5 1454 aa24.66■■□□□ 1.54
TNRC18-210ENST00000497663 ZNF518AQ6AHZ1 1483 aa24.65■■□□□ 1.54
TNRC18-210ENST00000497663 CEBPAP49715 358 aaPredicted RBP24.65■■□□□ 1.54
TNRC18-210ENST00000497663 SPDYE4A6NLX3 237 aa24.64■■□□□ 1.54
TNRC18-210ENST00000497663 PREX2Q70Z35 1606 aa24.64■■□□□ 1.53
TNRC18-210ENST00000497663 FYCO1Q9BQS8 1478 aa24.64■■□□□ 1.53
TNRC18-210ENST00000497663 ABCC1P33527 1531 aa24.62■■□□□ 1.53
TNRC18-210ENST00000497663 DIP2CQ9Y2E4 1556 aa24.62■■□□□ 1.53
TNRC18-210ENST00000497663 FER1L4A9Z1Z3 1794 aa24.61■■□□□ 1.53
TNRC18-210ENST00000497663 ABCA6Q8N139 1617 aa24.6■■□□□ 1.53
TNRC18-210ENST00000497663 MYT1LQ9UL68 1186 aa24.59■■□□□ 1.53
TNRC18-210ENST00000497663 CDC42BPAQ5VT25 1732 aa24.58■■□□□ 1.53
TNRC18-210ENST00000497663 SPDYE2BA6NHP3 402 aa24.58■■□□□ 1.53
TNRC18-210ENST00000497663 SPDYE6P0CI01 402 aa24.58■■□□□ 1.53
TNRC18-210ENST00000497663 SPDYE2Q495Y8 402 aa24.58■■□□□ 1.53
TNRC18-210ENST00000497663 ZNF777Q9ULD5 760 aaPredicted RBP24.57■■□□□ 1.52
TNRC18-210ENST00000497663 MLH3Q9UHC1 1453 aa24.57■■□□□ 1.52
TNRC18-210ENST00000497663 GPATCH8Q9UKJ3 1502 aaKnown RBP24.56■■□□□ 1.52
TNRC18-210ENST00000497663 ITSN2Q9NZM3 1697 aa24.56■■□□□ 1.52
TNRC18-210ENST00000497663 SAMD9LQ8IVG5 1584 aa24.54■■□□□ 1.52
TNRC18-210ENST00000497663 RBM42Q9BTD8 480 aaKnown RBP24.53■■□□□ 1.52
TNRC18-210ENST00000497663 HNRNPMP52272 730 aaKnown RBP eCLIP24.52■■□□□ 1.52
TNRC18-210ENST00000497663 KIDINS220Q9ULH0 1771 aa24.5■■□□□ 1.51
TNRC18-210ENST00000497663 ZNF692Q9BU19 519 aaPredicted RBP24.5■■□□□ 1.51
TNRC18-210ENST00000497663 SYCP2Q9BX26 1530 aa24.49■■□□□ 1.51
TNRC18-210ENST00000497663 REREQ9P2R6 1566 aa24.48■■□□□ 1.51
TNRC18-210ENST00000497663 ZNF644Q9H582 1327 aaPredicted RBP24.46■■□□□ 1.51
TNRC18-210ENST00000497663 CEP162Q5TB80 1403 aa24.44■■□□□ 1.5
TNRC18-210ENST00000497663 FBXO41Q8TF61 875 aa24.44■■□□□ 1.5
TNRC18-210ENST00000497663 AGLP35573 1532 aa24.44■■□□□ 1.5
TNRC18-210ENST00000497663 CFDP1Q9UEE9 299 aaPredicted RBP24.43■■□□□ 1.5
TNRC18-210ENST00000497663 MTUS2Q5JR59 1369 aa24.42■■□□□ 1.5
TNRC18-210ENST00000497663 CCNB3Q8WWL7 1395 aa24.42■■□□□ 1.5
TNRC18-210ENST00000497663 LOC105371045A0A1W2PR82 267 aa24.4■■□□□ 1.5
TNRC18-210ENST00000497663 SPAG9O60271 1321 aaKnown RBP24.39■■□□□ 1.5
TNRC18-210ENST00000497663 PREX1Q8TCU6 1659 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms