RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 LAMC3Q9Y6N6 1575 aa4.53□□□□□ -1.68
CKS1BP2-201ENST00000497342 NCKAP5LQ9HCH0 1330 aa4.53□□□□□ -1.68
CKS1BP2-201ENST00000497342 AK7Q96M32 723 aa4.53□□□□□ -1.68
CKS1BP2-201ENST00000497342 ZMYND15Q9H091 742 aa4.53□□□□□ -1.68
CKS1BP2-201ENST00000497342 NLRP6P59044 892 aa4.52□□□□□ -1.69
CKS1BP2-201ENST00000497342 REM2Q8IYK8 340 aaPredicted RBP4.52□□□□□ -1.69
CKS1BP2-201ENST00000497342 CCDC61Q9Y6R9 512 aa4.52□□□□□ -1.69
CKS1BP2-201ENST00000497342 ADGRL1O94910 1474 aa4.51□□□□□ -1.69
CKS1BP2-201ENST00000497342 PPP1R37O75864 691 aa4.51□□□□□ -1.69
CKS1BP2-201ENST00000497342 CERKQ8TCT0 537 aa4.51□□□□□ -1.69
CKS1BP2-201ENST00000497342 RSPH6AQ9H0K4 717 aa4.51□□□□□ -1.69
CKS1BP2-201ENST00000497342 PSEN1P49768 467 aa4.5□□□□□ -1.69
CKS1BP2-201ENST00000497342 SRCAPQ6ZRS2 3230 aa4.5□□□□□ -1.69
CKS1BP2-201ENST00000497342 SUPT5HO00267 1087 aaKnown RBP4.49□□□□□ -1.69
CKS1BP2-201ENST00000497342 PDE4AP27815 886 aa4.49□□□□□ -1.69
CKS1BP2-201ENST00000497342 GOPCQ9HD26 462 aa4.49□□□□□ -1.69
CKS1BP2-201ENST00000497342 TRIM66O15016 1216 aa4.47□□□□□ -1.69
CKS1BP2-201ENST00000497342 GPR37O15354 613 aa4.47□□□□□ -1.69
CKS1BP2-201ENST00000497342 ONECUT3O60422 494 aaPredicted RBP4.47□□□□□ -1.69
CKS1BP2-201ENST00000497342 UBTFP17480 764 aaKnown RBP4.47□□□□□ -1.69
CKS1BP2-201ENST00000497342 KDM4CQ9H3R0 1056 aa4.47□□□□□ -1.69
CKS1BP2-201ENST00000497342 PODXL2Q9NZ53 605 aa4.47□□□□□ -1.69
CKS1BP2-201ENST00000497342 IFFO2Q5TF58 517 aa4.46□□□□□ -1.7
CKS1BP2-201ENST00000497342 MS4A4AQ96JQ5 239 aa4.46□□□□□ -1.7
CKS1BP2-201ENST00000497342 PCDHB8Q9UN66 801 aa4.46□□□□□ -1.7
CKS1BP2-201ENST00000497342 PCDHB13Q9Y5F0 798 aa4.46□□□□□ -1.7
CKS1BP2-201ENST00000497342 PITPNM1O00562 1244 aa4.45□□□□□ -1.7
CKS1BP2-201ENST00000497342 PDE4DQ08499 809 aa4.45□□□□□ -1.7
CKS1BP2-201ENST00000497342 EFCAB3Q8N7B9 438 aa4.45□□□□□ -1.7
CKS1BP2-201ENST00000497342 DDX27Q96GQ7 796 aaKnown RBP4.45□□□□□ -1.7
CKS1BP2-201ENST00000497342 PHF8Q9UPP1 1060 aa4.45□□□□□ -1.7
CKS1BP2-201ENST00000497342 ATAD2BQ9ULI0 1458 aa4.44□□□□□ -1.7
CKS1BP2-201ENST00000497342 SPDYE16A6NNV3 312 aaPredicted RBP4.44□□□□□ -1.7
CKS1BP2-201ENST00000497342 HRCP23327 699 aa4.44□□□□□ -1.7
CKS1BP2-201ENST00000497342 PDIA6Q15084 440 aa4.44□□□□□ -1.7
CKS1BP2-201ENST00000497342 AMHR2Q16671 573 aa4.44□□□□□ -1.7
CKS1BP2-201ENST00000497342 GPIHBP1Q8IV16 184 aa4.44□□□□□ -1.7
CKS1BP2-201ENST00000497342 C1orf115Q9H7X2 142 aa4.44□□□□□ -1.7
CKS1BP2-201ENST00000497342 CLEC11AQ9Y240 323 aa4.44□□□□□ -1.7
CKS1BP2-201ENST00000497342 KIF13AQ9H1H9 1805 aa4.44□□□□□ -1.7
CKS1BP2-201ENST00000497342 A6NJR5 290 aa4.43□□□□□ -1.7
CKS1BP2-201ENST00000497342 TRIM26Q12899 539 aaPredicted RBP4.43□□□□□ -1.7
CKS1BP2-201ENST00000497342 FLIIQ13045 1269 aa4.43□□□□□ -1.7
CKS1BP2-201ENST00000497342 IFNL1Q8IU54 200 aa4.43□□□□□ -1.7
CKS1BP2-201ENST00000497342 KIF12Q96FN5 646 aa4.43□□□□□ -1.7
CKS1BP2-201ENST00000497342 LARP6Q9BRS8 491 aaKnown RBP4.43□□□□□ -1.7
CKS1BP2-201ENST00000497342 GPBP1L1Q9HC44 474 aaPredicted RBP4.43□□□□□ -1.7
CKS1BP2-201ENST00000497342 FARP1Q9Y4F1 1045 aaPredicted RBP4.43□□□□□ -1.7
CKS1BP2-201ENST00000497342 HMGXB3Q12766 1538 aa4.42□□□□□ -1.7
CKS1BP2-201ENST00000497342 PLEKHG3A1L390 1219 aa4.42□□□□□ -1.7
CKS1BP2-201ENST00000497342 MKRN3Q13064 507 aaKnown RBP4.42□□□□□ -1.7
CKS1BP2-201ENST00000497342 DDRGK1Q96HY6 314 aa4.42□□□□□ -1.7
CKS1BP2-201ENST00000497342 KDM6BO15054 1643 aa4.42□□□□□ -1.7
CKS1BP2-201ENST00000497342 MINK1Q8N4C8 1332 aaPredicted RBP4.42□□□□□ -1.7
CKS1BP2-201ENST00000497342 ZNF608Q9ULD9 1512 aaPredicted RBP4.41□□□□□ -1.7
CKS1BP2-201ENST00000497342 MLLT3P42568 568 aaPredicted RBP4.41□□□□□ -1.7
CKS1BP2-201ENST00000497342 RBM26Q5T8P6 1007 aaKnown RBP4.41□□□□□ -1.7
CKS1BP2-201ENST00000497342 GPHNQ9NQX3 736 aaPredicted RBP4.41□□□□□ -1.7
CKS1BP2-201ENST00000497342 CADPSQ9ULU8 1353 aa4.4□□□□□ -1.7
CKS1BP2-201ENST00000497342 GAPVD1Q14C86 1478 aa4.4□□□□□ -1.71
CKS1BP2-201ENST00000497342 RANGAP1P46060 587 aaPredicted RBP4.39□□□□□ -1.71
CKS1BP2-201ENST00000497342 FAM69CQ0P6D2 419 aa4.39□□□□□ -1.71
CKS1BP2-201ENST00000497342 MAP2K5Q13163 448 aa4.39□□□□□ -1.71
CKS1BP2-201ENST00000497342 POTEDQ86YR6 584 aa4.39□□□□□ -1.71
CKS1BP2-201ENST00000497342 IL27Q8NEV9 243 aa4.39□□□□□ -1.71
CKS1BP2-201ENST00000497342 TSPYL2Q9H2G4 693 aaPredicted RBP4.39□□□□□ -1.71
CKS1BP2-201ENST00000497342 CABP2Q9NPB3 220 aa4.39□□□□□ -1.71
CKS1BP2-201ENST00000497342 CHD1O14646 1710 aa4.38□□□□□ -1.71
CKS1BP2-201ENST00000497342 PTGER2P43116 358 aa4.38□□□□□ -1.71
CKS1BP2-201ENST00000497342 PPP1R15BQ5SWA1 713 aa4.38□□□□□ -1.71
CKS1BP2-201ENST00000497342 FAM117AQ9C073 453 aa4.38□□□□□ -1.71
CKS1BP2-201ENST00000497342 CEP164Q9UPV0 1460 aa4.37□□□□□ -1.71
CKS1BP2-201ENST00000497342 CLASP1Q7Z460 1538 aa4.37□□□□□ -1.71
CKS1BP2-201ENST00000497342 MAP3K13O43283 966 aa4.37□□□□□ -1.71
CKS1BP2-201ENST00000497342 FXR2P51116 673 aaKnown RBP eCLIP4.37□□□□□ -1.71
CKS1BP2-201ENST00000497342 EMILIN3Q9NT22 766 aa4.37□□□□□ -1.71
CKS1BP2-201ENST00000497342 IRF6O14896 467 aa4.36□□□□□ -1.71
CKS1BP2-201ENST00000497342 FOXK1P85037 733 aa4.36□□□□□ -1.71
CKS1BP2-201ENST00000497342 PARP9Q8IXQ6 854 aa4.36□□□□□ -1.71
CKS1BP2-201ENST00000497342 TMUB1Q9BVT8 246 aa4.36□□□□□ -1.71
CKS1BP2-201ENST00000497342 ABCC10Q5T3U5 1492 aa4.36□□□□□ -1.71
CKS1BP2-201ENST00000497342 SMARCA4P51532 1647 aa4.35□□□□□ -1.71
CKS1BP2-201ENST00000497342 KRI1Q8N9T8 703 aaKnown RBP4.35□□□□□ -1.71
CKS1BP2-201ENST00000497342 TRAIPQ9BWF2 469 aa4.35□□□□□ -1.71
CKS1BP2-201ENST00000497342 ZNF316A6NFI3 1004 aaPredicted RBP4.34□□□□□ -1.71
CKS1BP2-201ENST00000497342 TRAK2O60296 914 aa4.34□□□□□ -1.71
CKS1BP2-201ENST00000497342 CACNB1Q02641 598 aaPredicted RBP4.34□□□□□ -1.71
CKS1BP2-201ENST00000497342 FNBP4Q8N3X1 1017 aaPredicted RBP4.34□□□□□ -1.71
CKS1BP2-201ENST00000497342 IFT140Q96RY7 1462 aa4.34□□□□□ -1.71
CKS1BP2-201ENST00000497342 URB2Q14146 1524 aaKnown RBP4.34□□□□□ -1.71
CKS1BP2-201ENST00000497342 BAZ1BQ9UIG0 1483 aaKnown RBP4.33□□□□□ -1.72
CKS1BP2-201ENST00000497342 KIF3CO14782 793 aa4.33□□□□□ -1.72
CKS1BP2-201ENST00000497342 HIC1Q14526 733 aa4.33□□□□□ -1.72
CKS1BP2-201ENST00000497342 CHADLQ6NUI6 762 aa4.33□□□□□ -1.72
CKS1BP2-201ENST00000497342 NPM2Q86SE8 214 aaKnown RBP4.33□□□□□ -1.72
CKS1BP2-201ENST00000497342 OXER1Q8TDS5 423 aa4.33□□□□□ -1.72
CKS1BP2-201ENST00000497342 CCDC102AQ96A19 550 aa4.33□□□□□ -1.72
CKS1BP2-201ENST00000497342 FANCD2Q9BXW9 1451 aa4.32□□□□□ -1.72
CKS1BP2-201ENST00000497342 DPYSL4O14531 572 aa4.32□□□□□ -1.72
CKS1BP2-201ENST00000497342 GNPATO15228 680 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms