RNA–Protein interactions for RNA: ENST00000497287.5

GPATCH4-208, Transcript of G-patch domain containing 4, human

TSL 3

Gene GPATCH4, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPATCH4-208	ENST00000497287	PLCH2	O75038	1416 aa		10.97	□□□□□ -0.65
GPATCH4-208	ENST00000497287	PREX2	Q70Z35	1606 aa		10.97	□□□□□ -0.65
GPATCH4-208	ENST00000497287	MYO5C	Q9NQX4	1742 aa		10.97	□□□□□ -0.65
GPATCH4-208	ENST00000497287	ABCA9	Q8IUA7	1624 aa		10.96	□□□□□ -0.65
GPATCH4-208	ENST00000497287	ARHGAP5	Q13017	1502 aa		10.96	□□□□□ -0.65
GPATCH4-208	ENST00000497287	CAMSAP2	Q08AD1	1489 aa		10.96	□□□□□ -0.65
GPATCH4-208	ENST00000497287	EFCAB2	Q5VUJ9	269 aa		10.96	□□□□□ -0.65
GPATCH4-208	ENST00000497287	CDC42BPB	Q9Y5S2	1711 aa		10.95	□□□□□ -0.66
GPATCH4-208	ENST00000497287	ARAP3	Q8WWN8	1544 aa		10.95	□□□□□ -0.66
GPATCH4-208	ENST00000497287	ZNF644	Q9H582	1327 aa	Predicted RBP	10.95	□□□□□ -0.66
GPATCH4-208	ENST00000497287	RSPH4A	Q5TD94	716 aa		10.94	□□□□□ -0.66
GPATCH4-208	ENST00000497287	PLEKHH2	Q8IVE3	1493 aa		10.93	□□□□□ -0.66
GPATCH4-208	ENST00000497287	DAPK1	P53355	1430 aa		10.92	□□□□□ -0.66
GPATCH4-208	ENST00000497287	ABCC5	O15440	1437 aa		10.92	□□□□□ -0.66
GPATCH4-208	ENST00000497287	CD109	Q6YHK3	1445 aa		10.92	□□□□□ -0.66
GPATCH4-208	ENST00000497287	KIAA1107	Q9UPP5	1409 aa		10.92	□□□□□ -0.66
GPATCH4-208	ENST00000497287	DNMT1	P26358	1616 aa	Known RBP	10.91	□□□□□ -0.66
GPATCH4-208	ENST00000497287	GLI2	P10070	1586 aa		10.91	□□□□□ -0.66
GPATCH4-208	ENST00000497287	FAM69C	Q0P6D2	419 aa		10.91	□□□□□ -0.66
GPATCH4-208	ENST00000497287	PTPRK	Q15262	1439 aa		10.91	□□□□□ -0.66
GPATCH4-208	ENST00000497287	SAMD9L	Q8IVG5	1584 aa		10.9	□□□□□ -0.66
GPATCH4-208	ENST00000497287	TSPY4	P0CV99	314 aa		10.9	□□□□□ -0.66
GPATCH4-208	ENST00000497287	TSPY10	P0CW01	314 aa		10.9	□□□□□ -0.66
GPATCH4-208	ENST00000497287	HNRNPM	P52272	730 aa	Known RBP eCLIP	10.9	□□□□□ -0.66
GPATCH4-208	ENST00000497287	CHIC2	Q9UKJ5	165 aa		10.9	□□□□□ -0.66
GPATCH4-208	ENST00000497287	SETD5	Q9C0A6	1442 aa		10.9	□□□□□ -0.66
GPATCH4-208	ENST00000497287	ARHGEF5	Q12774	1597 aa		10.9	□□□□□ -0.67
GPATCH4-208	ENST00000497287	FANCA	O15360	1455 aa		10.89	□□□□□ -0.67
GPATCH4-208	ENST00000497287	ROCK1	Q13464	1354 aa		10.89	□□□□□ -0.67
GPATCH4-208	ENST00000497287	CCDC141	Q6ZP82	1450 aa		10.88	□□□□□ -0.67
GPATCH4-208	ENST00000497287	MBD5	Q9P267	1494 aa		10.88	□□□□□ -0.67
GPATCH4-208	ENST00000497287	HRC	P23327	699 aa		10.88	□□□□□ -0.67
GPATCH4-208	ENST00000497287	AKNA	Q7Z591	1439 aa		10.88	□□□□□ -0.67
GPATCH4-208	ENST00000497287	KIF13A	Q9H1H9	1805 aa		10.88	□□□□□ -0.67
GPATCH4-208	ENST00000497287	SHANK2	Q9UPX8	1470 aa		10.87	□□□□□ -0.67
GPATCH4-208	ENST00000497287	CFAP74	Q9C0B2	1584 aa		10.87	□□□□□ -0.67
GPATCH4-208	ENST00000497287	DIP2B	Q9P265	1576 aa		10.87	□□□□□ -0.67
GPATCH4-208	ENST00000497287	HFM1	A2PYH4	1435 aa		10.87	□□□□□ -0.67
GPATCH4-208	ENST00000497287	ABCC1	P33527	1531 aa		10.87	□□□□□ -0.67
GPATCH4-208	ENST00000497287	SYCP2	Q9BX26	1530 aa		10.87	□□□□□ -0.67
GPATCH4-208	ENST00000497287	CROCC2	H7BZ55	1655 aa		10.86	□□□□□ -0.67
GPATCH4-208	ENST00000497287	RRP7BP	Q9NSQ0	103 aa		10.86	□□□□□ -0.67
GPATCH4-208	ENST00000497287	ANKRD30A	Q9BXX3	1397 aa		10.86	□□□□□ -0.67
GPATCH4-208	ENST00000497287	RAB3GAP2	Q9H2M9	1393 aa		10.86	□□□□□ -0.67
GPATCH4-208	ENST00000497287	NAIP	Q13075	1403 aa		10.85	□□□□□ -0.67
GPATCH4-208	ENST00000497287	C9orf84	Q5VXU9	1444 aa		10.85	□□□□□ -0.67
GPATCH4-208	ENST00000497287	MAP3K4	Q9Y6R4	1608 aa		10.85	□□□□□ -0.67
GPATCH4-208	ENST00000497287	ADGRL1	O94910	1474 aa		10.85	□□□□□ -0.67
GPATCH4-208	ENST00000497287	ADGRL2	O95490	1459 aa		10.85	□□□□□ -0.67
GPATCH4-208	ENST00000497287	NEO1	Q92859	1461 aa		10.85	□□□□□ -0.67
GPATCH4-208	ENST00000497287	ADGB	Q8N7X0	1667 aa		10.85	□□□□□ -0.67
GPATCH4-208	ENST00000497287	ACIN1	Q9UKV3	1341 aa	Known RBP	10.84	□□□□□ -0.67
GPATCH4-208	ENST00000497287	CCER1	Q8TC90	406 aa	Predicted RBP	10.84	□□□□□ -0.67
GPATCH4-208	ENST00000497287	ARHGEF12	Q9NZN5	1544 aa		10.84	□□□□□ -0.67
GPATCH4-208	ENST00000497287	NCOA1	Q15788	1441 aa		10.84	□□□□□ -0.67
GPATCH4-208	ENST00000497287	SCAPER	Q9BY12	1400 aa		10.84	□□□□□ -0.67
GPATCH4-208	ENST00000497287	MAST1	Q9Y2H9	1570 aa		10.82	□□□□□ -0.68
GPATCH4-208	ENST00000497287	TEX14	Q8IWB6	1497 aa		10.82	□□□□□ -0.68
GPATCH4-208	ENST00000497287	TRAPPC8	Q9Y2L5	1435 aa		10.82	□□□□□ -0.68
GPATCH4-208	ENST00000497287	GCC2	Q8IWJ2	1684 aa		10.82	□□□□□ -0.68
GPATCH4-208	ENST00000497287	SPAG9	O60271	1321 aa	Known RBP	10.82	□□□□□ -0.68
GPATCH4-208	ENST00000497287	AFAP1	Q8N556	730 aa		10.8	□□□□□ -0.68
GPATCH4-208	ENST00000497287	RTEL1-TNFRSF6B	F6WH68	1400 aa		10.8	□□□□□ -0.68
GPATCH4-208	ENST00000497287	KIF15	Q9NS87	1388 aa		10.79	□□□□□ -0.68
GPATCH4-208	ENST00000497287	DENND4B	O75064	1496 aa	Predicted RBP	10.79	□□□□□ -0.68
GPATCH4-208	ENST00000497287	ZNF518A	Q6AHZ1	1483 aa		10.79	□□□□□ -0.68
GPATCH4-208	ENST00000497287	TSPOAP1	O95153	1857 aa		10.78	□□□□□ -0.68
GPATCH4-208	ENST00000497287	ZEB1	P37275	1124 aa	Predicted RBP	10.78	□□□□□ -0.68
GPATCH4-208	ENST00000497287	MYT1L	Q9UL68	1186 aa		10.78	□□□□□ -0.68
GPATCH4-208	ENST00000497287	DHX57	Q6P158	1386 aa	Known RBP	10.77	□□□□□ -0.68
GPATCH4-208	ENST00000497287	PLXNC1	O60486	1568 aa		10.77	□□□□□ -0.68
GPATCH4-208	ENST00000497287	POGZ	Q7Z3K3	1410 aa		10.77	□□□□□ -0.68
GPATCH4-208	ENST00000497287	ANKRD50	Q9ULJ7	1429 aa		10.77	□□□□□ -0.68
GPATCH4-208	ENST00000497287	PPRC1	Q5VV67	1664 aa	Known RBP	10.76	□□□□□ -0.69
GPATCH4-208	ENST00000497287	TRIM52	Q96A61	297 aa		10.76	□□□□□ -0.69
GPATCH4-208	ENST00000497287	CLSPN	Q9HAW4	1339 aa		10.76	□□□□□ -0.69
GPATCH4-208	ENST00000497287	ATP7A	Q04656	1500 aa		10.75	□□□□□ -0.69
GPATCH4-208	ENST00000497287	ZFYVE16	Q7Z3T8	1539 aa		10.75	□□□□□ -0.69
GPATCH4-208	ENST00000497287	DUOX2	Q9NRD8	1548 aa		10.75	□□□□□ -0.69
GPATCH4-208	ENST00000497287	KDM5C	P41229	1560 aa		10.74	□□□□□ -0.69
GPATCH4-208	ENST00000497287	INO80	Q9ULG1	1556 aa	Predicted RBP	10.74	□□□□□ -0.69
GPATCH4-208	ENST00000497287	KDM6B	O15054	1643 aa		10.74	□□□□□ -0.69
GPATCH4-208	ENST00000497287	MLH3	Q9UHC1	1453 aa		10.74	□□□□□ -0.69
GPATCH4-208	ENST00000497287	RAPGEF3	O95398	923 aa		10.73	□□□□□ -0.69
GPATCH4-208	ENST00000497287	ERBIN	Q96RT1	1412 aa		10.73	□□□□□ -0.69
GPATCH4-208	ENST00000497287	HECW2	Q9P2P5	1572 aa		10.72	□□□□□ -0.69
GPATCH4-208	ENST00000497287	RICTOR	Q6R327	1708 aa		10.71	□□□□□ -0.69
GPATCH4-208	ENST00000497287	DHX29	Q7Z478	1369 aa	Known RBP	10.71	□□□□□ -0.69
GPATCH4-208	ENST00000497287	KIDINS220	Q9ULH0	1771 aa		10.71	□□□□□ -0.69
GPATCH4-208	ENST00000497287	MPHOSPH9	Q99550	1183 aa		10.7	□□□□□ -0.7
GPATCH4-208	ENST00000497287	MAGI2	Q86UL8	1455 aa		10.69	□□□□□ -0.7
GPATCH4-208	ENST00000497287	NUP155	O75694	1391 aa		10.69	□□□□□ -0.7
GPATCH4-208	ENST00000497287	ZMYM4	Q5VZL5	1548 aa		10.68	□□□□□ -0.7
GPATCH4-208	ENST00000497287	SLC4A1AP	Q9BWU0	796 aa	Known RBP	10.68	□□□□□ -0.7
GPATCH4-208	ENST00000497287	FRMPD1	Q5SYB0	1578 aa		10.68	□□□□□ -0.7
GPATCH4-208	ENST00000497287	A2M	P01023	1474 aa		10.68	□□□□□ -0.7
GPATCH4-208	ENST00000497287	KDM5D	Q9BY66	1539 aa		10.67	□□□□□ -0.7
GPATCH4-208	ENST00000497287	EIF2AK4	Q9P2K8	1649 aa	Known RBP	10.66	□□□□□ -0.7
GPATCH4-208	ENST00000497287	UNC13B	O14795	1591 aa		10.66	□□□□□ -0.7
GPATCH4-208	ENST00000497287	KIF3B	O15066	747 aa		10.66	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms