RNA–Protein interactions for RNA: ENST00000497269.5

MSH5-219, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-219ENST00000497269 WDR70Q9NW82 654 aa12.6□□□□□ -0.39
MSH5-219ENST00000497269 C3orf67Q6ZVT6 689 aa12.57□□□□□ -0.4
MSH5-219ENST00000497269 TMEM121BQ9BXQ6 578 aaPredicted RBP12.57□□□□□ -0.4
MSH5-219ENST00000497269 PDE4AP27815 886 aa12.56□□□□□ -0.4
MSH5-219ENST00000497269 POTEB2H3BUK9 544 aa12.55□□□□□ -0.4
MSH5-219ENST00000497269 TMC2Q8TDI7 906 aa12.54□□□□□ -0.4
MSH5-219ENST00000497269 CRISPLD2Q9H0B8 497 aa12.54□□□□□ -0.4
MSH5-219ENST00000497269 TMEM92Q6UXU6 159 aa12.52□□□□□ -0.41
MSH5-219ENST00000497269 C2orf72A6NCS6 295 aa12.51□□□□□ -0.41
MSH5-219ENST00000497269 DDX27Q96GQ7 796 aaKnown RBP12.51□□□□□ -0.41
MSH5-219ENST00000497269 POTEJP0CG39 1038 aa12.5□□□□□ -0.41
MSH5-219ENST00000497269 GPHNQ9NQX3 736 aaPredicted RBP12.49□□□□□ -0.41
MSH5-219ENST00000497269 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.48□□□□□ -0.41
MSH5-219ENST00000497269 DSG2Q14126 1118 aa12.47□□□□□ -0.41
MSH5-219ENST00000497269 PPP1R15BQ5SWA1 713 aa12.47□□□□□ -0.41
MSH5-219ENST00000497269 RB1CC1Q8TDY2 1594 aa12.45□□□□□ -0.42
MSH5-219ENST00000497269 MFSD10Q14728 455 aa12.45□□□□□ -0.42
MSH5-219ENST00000497269 KCNV2Q8TDN2 545 aa12.44□□□□□ -0.42
MSH5-219ENST00000497269 E2F4Q16254 413 aa12.43□□□□□ -0.42
MSH5-219ENST00000497269 PLPP6Q8IY26 295 aa12.42□□□□□ -0.42
MSH5-219ENST00000497269 KIF3CO14782 793 aa12.41□□□□□ -0.42
MSH5-219ENST00000497269 SCUBE2Q9NQ36 999 aa12.4□□□□□ -0.42
MSH5-219ENST00000497269 FOXK1P85037 733 aa12.39□□□□□ -0.43
MSH5-219ENST00000497269 P3H3Q8IVL6 736 aa12.39□□□□□ -0.43
MSH5-219ENST00000497269 SLAIN1Q8ND83 568 aa12.38□□□□□ -0.43
MSH5-219ENST00000497269 NBR1Q14596 966 aa12.35□□□□□ -0.43
MSH5-219ENST00000497269 UPF1Q92900 1129 aaKnown RBP eCLIP12.35□□□□□ -0.43
MSH5-219ENST00000497269 LHX8Q68G74 356 aa12.34□□□□□ -0.43
MSH5-219ENST00000497269 BCANQ96GW7 911 aa12.34□□□□□ -0.43
MSH5-219ENST00000497269 MAMSTRQ6ZN01 415 aa12.33□□□□□ -0.44
MSH5-219ENST00000497269 EMILIN3Q9NT22 766 aa12.33□□□□□ -0.44
MSH5-219ENST00000497269 NACADO15069 1562 aa12.31□□□□□ -0.44
MSH5-219ENST00000497269 DPYSL4O14531 572 aa12.3□□□□□ -0.44
MSH5-219ENST00000497269 CAMK2BQ13554 666 aa12.3□□□□□ -0.44
MSH5-219ENST00000497269 OTUD5Q96G74 571 aa12.28□□□□□ -0.44
MSH5-219ENST00000497269 ARHGEF1Q92888 912 aaKnown RBP12.27□□□□□ -0.45
MSH5-219ENST00000497269 MAP3K9P80192 1104 aa12.24□□□□□ -0.45
MSH5-219ENST00000497269 UNC13AQ9UPW8 1703 aa12.23□□□□□ -0.45
MSH5-219ENST00000497269 SEMA3EO15041 775 aa12.21□□□□□ -0.45
MSH5-219ENST00000497269 OXER1Q8TDS5 423 aa12.19□□□□□ -0.46
MSH5-219ENST00000497269 HOXB3P14651 431 aaPredicted RBP12.16□□□□□ -0.46
MSH5-219ENST00000497269 DOK7Q18PE1 504 aa12.16□□□□□ -0.46
MSH5-219ENST00000497269 ZNF710Q8N1W2 664 aa12.16□□□□□ -0.46
MSH5-219ENST00000497269 KHSRPQ92945 711 aaKnown RBP eCLIP12.16□□□□□ -0.46
MSH5-219ENST00000497269 PCDHGA4Q9Y5G9 962 aa12.16□□□□□ -0.46
MSH5-219ENST00000497269 PTCD2Q8WV60 388 aaKnown RBP12.15□□□□□ -0.46
MSH5-219ENST00000497269 TBC1D12O60347 775 aa12.14□□□□□ -0.47
MSH5-219ENST00000497269 ARIH1Q9Y4X5 557 aaPredicted RBP12.14□□□□□ -0.47
MSH5-219ENST00000497269 EVI5O60447 810 aa12.13□□□□□ -0.47
MSH5-219ENST00000497269 MLLT3P42568 568 aaPredicted RBP12.13□□□□□ -0.47
MSH5-219ENST00000497269 PDIA6Q15084 440 aa12.13□□□□□ -0.47
MSH5-219ENST00000497269 ARSIQ5FYB1 569 aa12.13□□□□□ -0.47
MSH5-219ENST00000497269 BICRAQ9NZM4 1560 aa12.13□□□□□ -0.47
MSH5-219ENST00000497269 SLC34A2O95436 690 aa12.12□□□□□ -0.47
MSH5-219ENST00000497269 GRXCR2A6NFK2 248 aa12.1□□□□□ -0.47
MSH5-219ENST00000497269 RIMBP2O15034 1052 aa12.1□□□□□ -0.47
MSH5-219ENST00000497269 NUDT7P0C024 238 aa12.1□□□□□ -0.47
MSH5-219ENST00000497269 SPDYE16A6NNV3 312 aaPredicted RBP12.09□□□□□ -0.47
MSH5-219ENST00000497269 DDX12PQ92771 950 aa12.09□□□□□ -0.47
MSH5-219ENST00000497269 ZNF316A6NFI3 1004 aaPredicted RBP12.08□□□□□ -0.48
MSH5-219ENST00000497269 SNPHO15079 494 aa12.08□□□□□ -0.48
MSH5-219ENST00000497269 TESPA1A2RU30 521 aaPredicted RBP12.07□□□□□ -0.48
MSH5-219ENST00000497269 TULP1O00294 542 aaPredicted RBP12.04□□□□□ -0.48
MSH5-219ENST00000497269 GPR153Q6NV75 609 aa12.04□□□□□ -0.48
MSH5-219ENST00000497269 LMOD2Q6P5Q4 547 aa12.02□□□□□ -0.49
MSH5-219ENST00000497269 MYO15BQ96JP2 1530 aa12.01□□□□□ -0.49
MSH5-219ENST00000497269 FAM163AQ96GL9 167 aaPredicted RBP12.01□□□□□ -0.49
MSH5-219ENST00000497269 ZCCHC6Q5VYS8 1495 aaKnown RBP12.01□□□□□ -0.49
MSH5-219ENST00000497269 SCRIBQ14160 1630 aa12□□□□□ -0.49
MSH5-219ENST00000497269 TPRNQ4KMQ1 711 aa12□□□□□ -0.49
MSH5-219ENST00000497269 RBM26Q5T8P6 1007 aaKnown RBP12□□□□□ -0.49
MSH5-219ENST00000497269 SMYD5Q6GMV2 418 aa12□□□□□ -0.49
MSH5-219ENST00000497269 ZSWIM6Q9HCJ5 1215 aa12□□□□□ -0.49
MSH5-219ENST00000497269 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.99□□□□□ -0.49
MSH5-219ENST00000497269 PRKCSHP14314 528 aaPredicted RBP11.98□□□□□ -0.49
MSH5-219ENST00000497269 LHX6Q9UPM6 363 aa11.97□□□□□ -0.49
MSH5-219ENST00000497269 ST18O60284 1047 aa11.96□□□□□ -0.49
MSH5-219ENST00000497269 HOXB1P14653 301 aaPredicted RBP11.96□□□□□ -0.49
MSH5-219ENST00000497269 ZNF454Q8N9F8 522 aa11.96□□□□□ -0.49
MSH5-219ENST00000497269 RBM33Q96EV2 1170 aaKnown RBP11.96□□□□□ -0.49
MSH5-219ENST00000497269 ANO8Q9HCE9 1232 aaPredicted RBP11.96□□□□□ -0.49
MSH5-219ENST00000497269 KDM4FA0A1W2PPD8 638 aa11.95□□□□□ -0.5
MSH5-219ENST00000497269 MARVELD3Q96A59 401 aa11.95□□□□□ -0.5
MSH5-219ENST00000497269 PTGER2P43116 358 aa11.93□□□□□ -0.5
MSH5-219ENST00000497269 PRIM1P49642 420 aaKnown RBP11.93□□□□□ -0.5
MSH5-219ENST00000497269 PCDHGA10Q9Y5H3 936 aa11.93□□□□□ -0.5
MSH5-219ENST00000497269 OSBPP22059 807 aa11.92□□□□□ -0.5
MSH5-219ENST00000497269 PHF14O94880 888 aa11.91□□□□□ -0.5
MSH5-219ENST00000497269 NUTM2FA1L443 756 aa11.9□□□□□ -0.5
MSH5-219ENST00000497269 JPH4Q96JJ6 628 aa11.9□□□□□ -0.5
MSH5-219ENST00000497269 CC2D2AQ9P2K1 1620 aa11.89□□□□□ -0.51
MSH5-219ENST00000497269 MAP3K7O43318 606 aa11.89□□□□□ -0.51
MSH5-219ENST00000497269 EMP3P54852 163 aa11.89□□□□□ -0.51
MSH5-219ENST00000497269 GPIHBP1Q8IV16 184 aa11.89□□□□□ -0.51
MSH5-219ENST00000497269 ERBB3P21860 1342 aa11.88□□□□□ -0.51
MSH5-219ENST00000497269 DCAF1Q9Y4B6 1507 aa11.88□□□□□ -0.51
MSH5-219ENST00000497269 FOSBP53539 338 aa11.88□□□□□ -0.51
MSH5-219ENST00000497269 TYW1BQ6NUM6 668 aa11.88□□□□□ -0.51
MSH5-219ENST00000497269 CECR2Q9BXF3 1484 aa11.88□□□□□ -0.51
MSH5-219ENST00000497269 TSR1Q2NL82 804 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms