RNA–Protein interactions for RNA: ENST00000497216.2

SPTAN1-209, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 351 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-209ENST00000497216 KIF14Q15058 1648 aa22.43■■□□□ 1.18
SPTAN1-209ENST00000497216 UBTFP17480 764 aaKnown RBP22.43■■□□□ 1.18
SPTAN1-209ENST00000497216 FER1L4A9Z1Z3 1794 aa22.43■■□□□ 1.18
SPTAN1-209ENST00000497216 SCAPERQ9BY12 1400 aa22.42■■□□□ 1.18
SPTAN1-209ENST00000497216 CHIC1Q5VXU3 224 aa22.39■■□□□ 1.17
SPTAN1-209ENST00000497216 CDK11AQ9UQ88 783 aaPredicted RBP22.39■■□□□ 1.17
SPTAN1-209ENST00000497216 TROQ12816 1431 aaPredicted RBP22.39■■□□□ 1.17
SPTAN1-209ENST00000497216 EFCAB2Q5VUJ9 269 aa22.36■■□□□ 1.17
SPTAN1-209ENST00000497216 ATP10AO60312 1499 aa22.35■■□□□ 1.17
SPTAN1-209ENST00000497216 KDM5CP41229 1560 aa22.35■■□□□ 1.17
SPTAN1-209ENST00000497216 CDC42BPBQ9Y5S2 1711 aa22.34■■□□□ 1.17
SPTAN1-209ENST00000497216 ARHGEF12Q9NZN5 1544 aa22.34■■□□□ 1.17
SPTAN1-209ENST00000497216 ZNF518AQ6AHZ1 1483 aa22.34■■□□□ 1.17
SPTAN1-209ENST00000497216 CLIP1P30622 1438 aa22.33■■□□□ 1.17
SPTAN1-209ENST00000497216 C9orf84Q5VXU9 1444 aa22.33■■□□□ 1.17
SPTAN1-209ENST00000497216 ATP1B4Q9UN42 357 aaPredicted RBP22.33■■□□□ 1.17
SPTAN1-209ENST00000497216 EHMT2Q96KQ7 1210 aa22.32■■□□□ 1.16
SPTAN1-209ENST00000497216 ARHGAP5Q13017 1502 aa22.31■■□□□ 1.16
SPTAN1-209ENST00000497216 FBXO41Q8TF61 875 aa22.31■■□□□ 1.16
SPTAN1-209ENST00000497216 PREX2Q70Z35 1606 aa22.3■■□□□ 1.16
SPTAN1-209ENST00000497216 CCDC18Q5T9S5 1454 aa22.28■■□□□ 1.16
SPTAN1-209ENST00000497216 REREQ9P2R6 1566 aa22.28■■□□□ 1.16
SPTAN1-209ENST00000497216 CASKIN1Q8WXD9 1431 aa22.27■■□□□ 1.16
SPTAN1-209ENST00000497216 PREX1Q8TCU6 1659 aa22.26■■□□□ 1.15
SPTAN1-209ENST00000497216 DIP2CQ9Y2E4 1556 aa22.26■■□□□ 1.15
SPTAN1-209ENST00000497216 ITSN2Q9NZM3 1697 aa22.24■■□□□ 1.15
SPTAN1-209ENST00000497216 CDC42BPAQ5VT25 1732 aa22.23■■□□□ 1.15
SPTAN1-209ENST00000497216 ABCC1P33527 1531 aa22.23■■□□□ 1.15
SPTAN1-209ENST00000497216 MLECQ14165 292 aa22.23■■□□□ 1.15
SPTAN1-209ENST00000497216 ABCA6Q8N139 1617 aa22.23■■□□□ 1.15
SPTAN1-209ENST00000497216 MLH3Q9UHC1 1453 aa22.22■■□□□ 1.15
SPTAN1-209ENST00000497216 SETD1BQ9UPS6 1966 aaKnown RBP22.21■■□□□ 1.15
SPTAN1-209ENST00000497216 HSPA2P54652 639 aa22.2■■□□□ 1.14
SPTAN1-209ENST00000497216 AFAP1Q8N556 730 aa22.2■■□□□ 1.14
SPTAN1-209ENST00000497216 FYCO1Q9BQS8 1478 aa22.2■■□□□ 1.14
SPTAN1-209ENST00000497216 AGLP35573 1532 aa22.17■■□□□ 1.14
SPTAN1-209ENST00000497216 PLPPR3Q6T4P5 718 aa22.17■■□□□ 1.14
SPTAN1-209ENST00000497216 KIDINS220Q9ULH0 1771 aa22.16■■□□□ 1.14
SPTAN1-209ENST00000497216 TRAPPC8Q9Y2L5 1435 aa22.14■■□□□ 1.14
SPTAN1-209ENST00000497216 C3P01024 1663 aa22.14■■□□□ 1.13
SPTAN1-209ENST00000497216 STRCQ7RTU9 1775 aa22.12■■□□□ 1.13
SPTAN1-209ENST00000497216 SAMD9LQ8IVG5 1584 aa22.09■■□□□ 1.13
SPTAN1-209ENST00000497216 CEBPAP49715 358 aaPredicted RBP22.08■■□□□ 1.13
SPTAN1-209ENST00000497216 UHRF1BP1Q6BDS2 1440 aa22.07■■□□□ 1.12
SPTAN1-209ENST00000497216 MYT1LQ9UL68 1186 aa22.07■■□□□ 1.12
SPTAN1-209ENST00000497216 GPATCH8Q9UKJ3 1502 aaKnown RBP22.06■■□□□ 1.12
SPTAN1-209ENST00000497216 MROH2AA6NES4 1674 aa22.05■■□□□ 1.12
SPTAN1-209ENST00000497216 SYCP2Q9BX26 1530 aa22.04■■□□□ 1.12
SPTAN1-209ENST00000497216 CERKQ8TCT0 537 aa22.02■■□□□ 1.12
SPTAN1-209ENST00000497216 CNTLNQ9NXG0 1405 aa22.02■■□□□ 1.12
SPTAN1-209ENST00000497216 INO80Q9ULG1 1556 aaPredicted RBP22.01■■□□□ 1.11
SPTAN1-209ENST00000497216 KIAA1107Q9UPP5 1409 aa22■■□□□ 1.11
SPTAN1-209ENST00000497216 PLEKHH2Q8IVE3 1493 aa22■■□□□ 1.11
SPTAN1-209ENST00000497216 ATP7AQ04656 1500 aa21.99■■□□□ 1.11
SPTAN1-209ENST00000497216 PLXNC1O60486 1568 aa21.99■■□□□ 1.11
SPTAN1-209ENST00000497216 SUPT6HQ7KZ85 1726 aaKnown RBP21.98■■□□□ 1.11
SPTAN1-209ENST00000497216 DMRT2Q9Y5R5 561 aa21.98■■□□□ 1.11
SPTAN1-209ENST00000497216 ESF1Q9H501 851 aaKnown RBP21.96■■□□□ 1.11
SPTAN1-209ENST00000497216 PTPRTO14522 1441 aa21.95■■□□□ 1.1
SPTAN1-209ENST00000497216 ZNF777Q9ULD5 760 aaPredicted RBP21.94■■□□□ 1.1
SPTAN1-209ENST00000497216 SPAG9O60271 1321 aaKnown RBP21.94■■□□□ 1.1
SPTAN1-209ENST00000497216 NPATQ14207 1427 aa21.94■■□□□ 1.1
SPTAN1-209ENST00000497216 ADGBQ8N7X0 1667 aa21.93■■□□□ 1.1
SPTAN1-209ENST00000497216 CCNB3Q8WWL7 1395 aa21.93■■□□□ 1.1
SPTAN1-209ENST00000497216 TIAM1Q13009 1591 aa21.92■■□□□ 1.1
SPTAN1-209ENST00000497216 EHBP1L1Q8N3D4 1523 aa21.91■■□□□ 1.1
SPTAN1-209ENST00000497216 MTUS2Q5JR59 1369 aa21.91■■□□□ 1.1
SPTAN1-209ENST00000497216 HNRNPMP52272 730 aaKnown RBP eCLIP21.91■■□□□ 1.1
SPTAN1-209ENST00000497216 CFDP1Q9UEE9 299 aaPredicted RBP21.91■■□□□ 1.1
SPTAN1-209ENST00000497216 CLTCQ00610 1675 aaKnown RBP21.91■■□□□ 1.1
SPTAN1-209ENST00000497216 A2MP01023 1474 aa21.9■■□□□ 1.1
SPTAN1-209ENST00000497216 ZNF142P52746 1687 aaPredicted RBP21.89■■□□□ 1.1
SPTAN1-209ENST00000497216 NCOA1Q15788 1441 aa21.89■■□□□ 1.09
SPTAN1-209ENST00000497216 ZMYM3Q14202 1370 aa21.87■■□□□ 1.09
SPTAN1-209ENST00000497216 MYO3AQ8NEV4 1616 aa21.85■■□□□ 1.09
SPTAN1-209ENST00000497216 CEP162Q5TB80 1403 aa21.85■■□□□ 1.09
SPTAN1-209ENST00000497216 CAMSAP1Q5T5Y3 1602 aa21.84■■□□□ 1.09
SPTAN1-209ENST00000497216 LTBP4Q8N2S1 1624 aa21.84■■□□□ 1.09
SPTAN1-209ENST00000497216 MBD5Q9P267 1494 aa21.84■■□□□ 1.09
SPTAN1-209ENST00000497216 IQSEC2Q5JU85 1478 aa21.82■■□□□ 1.08
SPTAN1-209ENST00000497216 RTEL1-TNFRSF6BF6WH68 1400 aa21.81■■□□□ 1.08
SPTAN1-209ENST00000497216 PTPRKQ15262 1439 aa21.8■■□□□ 1.08
SPTAN1-209ENST00000497216 PPP6R1Q9UPN7 881 aa21.8■■□□□ 1.08
SPTAN1-209ENST00000497216 CEP170BQ9Y4F5 1589 aaPredicted RBP21.78■■□□□ 1.08
SPTAN1-209ENST00000497216 PLA2R1Q13018 1463 aa21.78■■□□□ 1.08
SPTAN1-209ENST00000497216 ZNF644Q9H582 1327 aaPredicted RBP21.78■■□□□ 1.08
SPTAN1-209ENST00000497216 FAM135AQ9P2D6 1515 aa21.75■■□□□ 1.07
SPTAN1-209ENST00000497216 TCOF1Q13428 1488 aaKnown RBP21.73■■□□□ 1.07
SPTAN1-209ENST00000497216 NCOA2Q15596 1464 aa21.73■■□□□ 1.07
SPTAN1-209ENST00000497216 CCDC141Q6ZP82 1450 aa21.73■■□□□ 1.07
SPTAN1-209ENST00000497216 GGT6Q6P531 493 aa21.73■■□□□ 1.07
SPTAN1-209ENST00000497216 DHX29Q7Z478 1369 aaKnown RBP21.73■■□□□ 1.07
SPTAN1-209ENST00000497216 CAMSAP2Q08AD1 1489 aa21.72■■□□□ 1.07
SPTAN1-209ENST00000497216 ARHGEF5Q12774 1597 aa21.7■■□□□ 1.06
SPTAN1-209ENST00000497216 A2ML1A8K2U0 1454 aa21.69■■□□□ 1.06
SPTAN1-209ENST00000497216 DNMT1P26358 1616 aaKnown RBP21.69■■□□□ 1.06
SPTAN1-209ENST00000497216 PKD2Q13563 968 aa21.68■■□□□ 1.06
SPTAN1-209ENST00000497216 POLR1AO95602 1720 aaPredicted RBP21.67■■□□□ 1.06
SPTAN1-209ENST00000497216 KDM5DQ9BY66 1539 aa21.67■■□□□ 1.06
SPTAN1-209ENST00000497216 RSPH4AQ5TD94 716 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms